Factsheet for TraesCS4A01G302000.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G096600.1
TraesCS1B01G127000.1
TraesCS1D01G105600.1
TraesCS2A01G000200.1
TraesCS2B01G023800.1
TraesCS2D01G000500.1
TraesCS4A01G274300.1
TraesCS4A01G340900.1
TraesCS4A01G344200.1
TraesCS4B01G039300.1
TraesCS4D01G036400.2
TraesCS5A01G002600.1
TraesCS5B01G001600.1
TraesCS5B01G527300.1
TraesCS5B01G533800.1
TraesCS5D01G002600.1
TraesCS6A01G285800.1
TraesCS6A01G329400.1
TraesCS6A01G399400.2
TraesCS6B01G314600.1
TraesCS6B01G360200.1
TraesCS6B01G439600.1
TraesCS6D01G266200.1
TraesCS6D01G308300.1
TraesCS6D01G383600.1
TraesCS7A01G146600.1
TraesCS7B01G049100.1
TraesCS7B01G049400.1
TraesCS7D01G148100.1
TraesCS7D01G148400.1
TraesCS7D01G148700.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G03730.1	TraesCS1A01G096600.1	AT2G40940.1	9560288
AT5G03730.1	TraesCS1B01G127000.1	AT2G40940.1	9560288
AT5G03730.1	TraesCS1D01G105600.1	AT2G40940.1	9560288
AT5G03730.1	TraesCS4A01G274300.1	AT2G40940.1	9560288
AT5G03730.1	TraesCS4A01G344200.1	AT2G40940.1	9560288
AT5G03730.1	TraesCS4B01G039300.1	AT2G40940.1	9560288
AT5G03730.1	TraesCS4D01G036400.2	AT2G40940.1	9560288
AT5G03730.1	TraesCS5A01G002600.1	AT2G40940.1	9560288
AT5G03730.1	TraesCS5B01G001600.1	AT2G40940.1	9560288
AT5G03730.1	TraesCS5B01G527300.1	AT2G40940.1	9560288
AT5G03730.1	TraesCS5D01G002600.1	AT2G40940.1	9560288
AT5G03730.1	TraesCS4A01G340900.1	AT2G47430.1	9560288
AT5G03730.1	TraesCS5B01G533800.1	AT2G47430.1	9560288
AT5G03730.1	TraesCS7A01G146600.1	AT2G47430.1	9560288
AT5G03730.1	TraesCS7B01G049100.1	AT2G47430.1	9560288
AT5G03730.1	TraesCS7B01G049400.1	AT2G47430.1	9560288
AT5G03730.1	TraesCS7D01G148100.1	AT2G47430.1	9560288
AT5G03730.1	TraesCS7D01G148400.1	AT2G47430.1	9560288
AT5G03730.1	TraesCS7D01G148700.1	AT2G47430.1	9560288
AT5G03730.1	TraesCS2A01G000200.1	AT3G23150.1	12177468
AT5G03730.1	TraesCS2B01G023800.1	AT3G23150.1	12177468
AT5G03730.1	TraesCS2D01G000500.1	AT3G23150.1	12177468
AT5G03730.1	TraesCS6A01G285800.1	AT3G23150.1	12177468
AT5G03730.1	TraesCS6A01G329400.1	AT3G23150.1	12177468
AT5G03730.1	TraesCS6A01G399400.2	AT3G23150.1	12177468
AT5G03730.1	TraesCS6B01G314600.1	AT3G23150.1	12177468
AT5G03730.1	TraesCS6B01G360200.1	AT3G23150.1	12177468
AT5G03730.1	TraesCS6B01G439600.1	AT3G23150.1	12177468
AT5G03730.1	TraesCS6D01G266200.1	AT3G23150.1	12177468
AT5G03730.1	TraesCS6D01G308300.1	AT3G23150.1	12177468
AT5G03730.1	TraesCS6D01G383600.1	AT3G23150.1	12177468

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G010200.1	Wheat	plastid	99.35	99.74
TraesCS4B01G012100.1	Wheat	plastid	99.22	99.35
HORVU4Hr1G001850.1	Barley	plastid	98.06	98.06
Os09t0566550-01	Rice	cytosol, plastid	84.73	87.22
OQU89015	Sorghum	cytosol	82.79	83.77
Zm00001d005348_P001	Maize	cytosol	82.41	82.83
GSMUA_Achr8P07600_001	Banana	cytosol	62.74	57.95
CDY10360	Canola	cytosol	54.08	57.03
GSMUA_Achr11P...	Banana	cytosol, plastid	56.53	56.31
CDX70289	Canola	cytosol	54.2	56.09
GSMUA_Achr11P...	Banana	cytosol	56.92	54.93
KRH32650	Soybean	cytosol	59.38	54.9
PGSC0003DMT400021612	Potato	cytosol	55.89	54.55
KRH20027	Soybean	cytosol	58.86	54.43
VIT_13s0074g00430.t01	Wine grape	cytosol	53.3	54.35
CDX80884	Canola	cytosol	55.76	54.28
CDY11267	Canola	cytosol	55.5	53.89
Solyc10g085570.1.1	Tomato	cytosol	55.11	53.72
Bra005778.1-P	Field mustard	cytosol	55.24	53.71
KRH71740	Soybean	cytosol	45.8	53.64
Solyc09g009090.2.1	Tomato	cytosol	57.7	53.29
KRG96132	Soybean	cytosol	55.37	52.97
KRH67846	Soybean	cytosol	55.37	52.84
AT5G03730.1	Thale cress	cytosol	56.02	52.74
VIT_08s0007g03910.t01	Wine grape	cytosol	57.83	52.22
Bra009514.1-P	Field mustard	plastid	51.36	52.1
Solyc10g083610.1.1	Tomato	cytosol	53.82	50.18
KRH33179	Soybean	cytosol	24.06	48.82
TraesCS2A01G426200.3	Wheat	cytosol	39.97	40.39
TraesCS6A01G186100.1	Wheat	mitochondrion	34.67	30.95
TraesCS3A01G420200.2	Wheat	cytosol	22.38	29.78
TraesCS1A01G131600.1	Wheat	cytosol	35.32	28.47
TraesCS5A01G085900.2	Wheat	cytosol	26.52	27.22
TraesCS5A01G396300.3	Wheat	nucleus	25.36	27.15
TraesCS4A01G029800.1	Wheat	mitochondrion, plastid	35.19	26.9
TraesCS6A01G190500.2	Wheat	cytosol	27.81	26.58
TraesCS6A01G321900.1	Wheat	cytosol	24.32	26.18
TraesCS4A01G171500.1	Wheat	cytosol	25.36	26.13
TraesCS3A01G271100.1	Wheat	cytosol	26.39	25.63
TraesCS7A01G190300.1	Wheat	cytosol	34.54	25.09
TraesCS3A01G420300.2	Wheat	cytosol	22.64	24.54
TraesCS6A01G308500.1	Wheat	cytosol	34.41	23.92
TraesCS5A01G398200.1	Wheat	cytosol	18.37	18.61
TraesCS5A01G063200.1	Wheat	cytosol	20.05	13.75
TraesCS7A01G511900.1	Wheat	cytosol	18.89	13.24
TraesCS6A01G344800.1	Wheat	cytosol	17.59	12.42
TraesCS7A01G145100.1	Wheat	cytosol	18.37	11.16

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
MapMan:11.5.2.2	MapMan:18.4.1.30	Gene3D:3.30.200.20	InterPro:CTR1	GO:GO:0000166	GO:GO:0001666
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005789
GO:GO:0006464	GO:GO:0006468	GO:GO:0006629	GO:GO:0006950	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009628	GO:GO:0009686	GO:GO:0009719	GO:GO:0009723
GO:GO:0009744	GO:GO:0009750	GO:GO:0009791	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	GO:GO:0046777	GO:GO:0048510	GO:GO:0071281	GO:GO:2000035
GO:GO:2000069	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PFAM:PF14381	PRINTS:PR00109
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR44329	PANTHER:PTHR44329:SF1	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:TraesCS4A01G302000
EnsemblPlants:TraesCS4A01G302000.1	TIGR:cd13999	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr4A:-:598719419..598726719

Molecular Weight (calculated)

83858.0 Da

IEP (calculated)

7.000

GRAVY (calculated)

-0.196

Length

773 amino acids

Sequence
(BLAST)

001: MELPAAGGGR RTSYSLLSQF PDDAAAAGAS PAVLQRQSSG GSSYGAGSSV SASSDYPFHL PPAAAAAGGG GGGGTPSPCK SWAQQAEETY QLQLALALRL
101: CADAACAADP GFLDPGDSGG SKMGGGGGGG SGSGRAFPLA PPSPTAEALS HRFWVNGSLS YSNTIPDGFY LIQGMDPFVW SMCTDVHEEN RIPSVESLKS
201: VRPDDSSIQV VLVDRRADFD LGMLENYASS FLSSSSDMKD VINQLAKLVS SRMGGTTSNE ENLLPRWKES SEAIKSSAGS IVLHLGKLPI GLCKHRSLLF
301: KMLADKVNIP CRLVKGCKYC KAEDASSCVV RFGLEREYLV DLFGAPGQLS DPDSFVNGPY SLSVPSPLRP PKFRSLEITS NFSSVAKQYF SDCHSLNLLF
401: SDASTGASNG AAVAVDQMYS KKHDAGDGIA NSWVPVKGQA IANSDIILPE APREVLPLMT PSNLTADKKK EFQLIEGNQY LRSTVSDLSL AVDDLIIPWS
501: ELVLKEKIGA GSFGTVHRAD WHGSDVAVKI LMEQDYHLDR FKEFMREVAI MKSLRHPNIV LFMGAVTEPP NLSIVTEYLS RGSLYKLLHR SGAREVLDER
601: RRLNMAFDVA KGMNYLHRRS PPIVHRDLKS PNLLVDKKYT VKVCDFGLSR LKANTYLSSK SLAGTPEWMA PEVLRDEPSN EKSDVYSFAV ILWELMTLQQ
701: PWCNLNPAQV VAAVGFKGRR LEIPKELNPQ VAALIESCWA NEPWRRPSFA NIMETLRPLI NKVPVPQLIR SDS

Best Arabidopsis Sequence Match ( AT5G03730.2 )
(BLAST)

001: MEMPGRRSNY TLLSQFSDDQ VSVSVTGAPP PHYDSLSSEN RSNHNSGNTG KAKAERGGFD WDPSGGGGGD HRLNNQPNRV GNNMYASSLG LQRQSSGSSF
101: GESSLSGDYY MPTLSAAANE IESVGFPQDD GFRLGFGGGG GDLRIQMAAD SAGGSSSGKS WAQQTEESYQ LQLALALRLS SEATCADDPN FLDPVPDESA
201: LRTSPSSAET VSHRFWVNGC LSYYDKVPDG FYMMNGLDPY IWTLCIDLHE SGRIPSIESL RAVDSGVDSS LEAIIVDRRS DPAFKELHNR VHDISCSCIT
301: TKEVVDQLAK LICNRMGGPV IMGEDELVPM WKECIDGLKE IFKVVVPIGS LSVGLCRHRA LLFKVLADII DLPCRIAKGC KYCNRDDAAS CLVRFGLDRE
401: YLVDLVGKPG HLWEPDSLLN GPSSISISSP LRFPRPKPVE PAVDFRLLAK QYFSDSQSLN LVFDPASDDM GFSMFHRQYD NPGGENDALA ENGGGSLPPS
501: ANMPPQNMMR ASNQIEAAPM NAPPISQPVP NRANRELGLD GDDMDIPWCD LNIKEKIGAG SFGTVHRAEW HGSDVAVKIL MEQDFHAERV NEFLREVAIM
601: KRLRHPNIVL FMGAVTQPPN LSIVTEYLSR GSLYRLLHKS GAREQLDERR RLSMAYDVAK GMNYLHNRNP PIVHRDLKSP NLLVDKKYTV KVCDFGLSRL
701: KASTFLSSKS AAGTPEWMAP EVLRDEPSNE KSDVYSFGVI LWELATLQQP WGNLNPAQVV AAVGFKCKRL EIPRNLNPQV AAIIEGCWTN EPWKRPSFAT
801: IMDLLRPLIK SAVPPPNRSD L

Arabidopsis Description

CTR1Serine/threonine-protein kinase CTR1 [Source:UniProtKB/Swiss-Prot;Acc:Q05609]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.