Factsheet for TraesCS5B01G533800.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS4A01G302000.1
TraesCS4B01G012100.1
TraesCS4D01G010200.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G47430.1	TraesCS4A01G302000.1	AT5G03730.1	9560288
AT2G47430.1	TraesCS4B01G012100.1	AT5G03730.1	9560288
AT2G47430.1	TraesCS4D01G010200.1	AT5G03730.1	9560288

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G340900.1	Wheat	endoplasmic reticulum, golgi	91.96	91.96
Zm00001d012994_P001	Maize	extracellular, golgi, vacuole	53.41	53.33
TraesCS7B01G049100.1	Wheat	plasma membrane	78.34	52.13
TraesCS7B01G049400.1	Wheat	plasma membrane	69.48	48.8
KXG26059	Sorghum	endoplasmic reticulum, extracellular, golgi	37.19	48.23
Os06t0183200-01	Rice	endoplasmic reticulum, golgi, plasma membrane	58.72	41.13
Zm00001d035846_P001	Maize	extracellular	53.41	37.84
KXG19481	Sorghum	plasma membrane	55.72	37.49
Solyc12g099720.1.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	33.24	32.97
PGSC0003DMT400011818	Potato	extracellular, golgi, peroxisome	33.11	31.72
GSMUA_Achr3P22920_001	Banana	extracellular	38.28	29.27
KRH68254	Soybean	cytosol	34.6	24.05
VIT_07s0005g01380.t01	Wine grape	plasma membrane	34.88	23.4
Bra032761.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	32.56	23.0
CDY01193	Canola	endoplasmic reticulum, golgi, plasma membrane	32.43	22.28
CDY12735	Canola	endoplasmic reticulum, golgi, plasma membrane	31.74	21.88
AT2G47430.1	Thale cress	plasma membrane	33.11	21.66
CDX80103	Canola	endoplasmic reticulum, golgi, plasma membrane	32.15	21.2
CDY55381	Canola	endoplasmic reticulum, plasma membrane, plastid	32.29	20.75
TraesCS6B01G342700.1	Wheat	mitochondrion	20.57	15.57
TraesCS4B01G050200.1	Wheat	cytosol	20.57	14.98
TraesCS3B01G469000.1	Wheat	cytosol, golgi, mitochondrion, peroxisome	20.3	14.77
TraesCS7B01G405100.1	Wheat	nucleus	18.26	13.83
TraesCS4B01G039300.1	Wheat	cytosol, golgi, plasma membrane	11.44	13.23
TraesCS5B01G001600.1	Wheat	plasma membrane	11.04	12.86
TraesCS2B01G495500.1	Wheat	nucleus	10.08	12.19
TraesCS1B01G127000.1	Wheat	cytosol, golgi, plasma membrane	9.95	11.44
TraesCS6B01G439600.1	Wheat	mitochondrion	10.08	9.44
TraesCS2B01G023800.1	Wheat	plasma membrane	9.54	9.1
TraesCS6B01G360200.1	Wheat	cytosol, endoplasmic reticulum, golgi	8.31	8.38
TraesCS6B01G314600.1	Wheat	plasma membrane	8.04	8.09
TraesCS5B01G527300.1	Wheat	cytosol, golgi, plasma membrane	2.18	4.27

Protein Annotations

Gene3D:1.10.287.130	MapMan:11.4.2.3	Gene3D:3.40.50.2300	InterPro:CheY-like_superfamily	ncoils:Coil	GO:GO:0000155
GO:GO:0000160	GO:GO:0003674	GO:GO:0003824	GO:GO:0004871	GO:GO:0006464	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0016772	GO:GO:0019538	GO:GO:0038023	InterPro:HATPase_C	InterPro:HATPase_C_sf
InterPro:HisK_dim/P	InterPro:HisK_dim/P_sf	InterPro:His_kinase_dom	InterPro:IPR001789	InterPro:IPR005467	InterPro:IPR036890
PFAM:PF00072	PFAM:PF00512	PFAM:PF02518	PRINTS:PR00344	PFscan:PS50109	PFscan:PS50110
PANTHER:PTHR43711	PANTHER:PTHR43711:SF1	SMART:SM00387	SMART:SM00388	SMART:SM00448	SUPFAM:SSF47384
SUPFAM:SSF52172	SUPFAM:SSF55874	InterPro:Sig_transdc_His_kin-like_C	InterPro:Sig_transdc_resp-reg_receiver	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS5B01G533800
EnsemblPlants:TraesCS5B01G533800.1	TIGR:cd00075	TIGR:cd00082	TIGR:cd00156	SEG:seg	:

Description

No Description!

Coordinates

chr5B:-:690318928..690322486

Molecular Weight (calculated)

80556.5 Da

IEP (calculated)

6.237

GRAVY (calculated)

-0.123

Length

734 amino acids

Sequence
(BLAST)

001: MEVVAVCIMC TVVAIAAVVC FLMARAMWRA GAREAVLEAD LVRQKEALRQ AERKSMNKSN AFARASHDIR SSLAAIVGLI ELSRLEAHDN PNLTYNLDQM
101: DVGTNKLLDI LNTILDMGKV ESGKMQLEEV EFKMTDVLEE SMDLANVIGM SRGIEVIWDP CDFSVLRCTA TIGDYKRVKK ILDNLLSNAI KFTHEGHVML
201: RAWANRPIMR RSMISTPTRF SPCRRPGGVF QWLLGRRENC NEHNGCMSLQ NDSNSVEFYF EVVDTGVGIP KDKRESVFEN YVQVKEGHGG TGLGLGIVQS
301: FVRLMGGEIN IMDNEQGAAG TCFGFNVFLK VSDSPKVEED LEQGRTPPSL FSEPACFKGG QCVLLVHGNE TRRILHTCME SIGMKVWPVP STELLASSLD
401: KARIAGGASP SRPALMSSLH GVGDGDFDCT TDRCFSSKEM VSHLRNSSGM AGNHEGHVHP FGLLVIVDVS SGMLHKVARE AVSLARIRHQ APCRVVCLTD
501: LKTPSEDLRK FKEAAICDLD LRKPIHGSRL HKLLQVMRDL QASPFHQQHP YQFGTAMKEV PAADQTSEIT PVAAAAALQG PTDVGDGKPL EGMHVLLAED
601: TLVLQIVQKQ VLTNLGAAVE IATDGSMAVA MFTKALEGAN GVPESHVDTG AMPYDVIFMD CQMPVMDGYE ATRRIREEES RHGIRTPIIA LTAHSEEEGQ
701: QEAIQAGMDL HLTKPIPKSK IAEIVLELCN EIKK

Best Arabidopsis Sequence Match ( AT2G47430.1 )
(BLAST)

0001: MMVKVTKLVA SRPIVVFCVL AFLVVVFECI WISNWRTTTE NLVKEVASFT EDLRTSLVSE IENIGKFTYA KTNLSTIGLA RVIDSYITNN DTGFTEIQTQ
0101: IAPLLFVAYS TILQVSQVSY ISRDGLMFSY IAESNTSVAV FANSSSNSSR GDYTWYTQTV DQLTGRLNGN STKSQSLDVT HTDWFQAAQS NNYTTAFVGT
0201: SLGGEDNETL IQSVVSLYSK KGLVSLGFPV KTLTEVLNSL NLHGEELYMW TKDGTVLVRE GSLNDSFFIS NGSICFGRES NSLWSQCIPE NCSSSGYEVE
0301: IKRLRYQAFC SVIEVSGVPL RYTLMFPNKG GATRIKHQAE KAKYQLIVVM IFLGFGWPVW FVWFMMQATR REMHMRATLI NQMEATQQAE RKSMNKSQAF
0401: ANASHDIRGA LAGMKGLIDI CRDGVKPGSD VDTTLNQVNV CAKDLVALLN SVLDMSKIES GKMQLVEEDF NLSKLLEDVI DFYHPVAMKK GVDVVLDPHD
0501: GSVFKFSNVR GDSGRLKQIL NNLVSNAVKF TVDGHIAVRA WAQRPGSNSS VVLASYPKGV SKFVKSMFCK NKEESSTYET EISNSIRNNA NTMEFVFEVD
0601: DTGKGIPMEM RKSVFENYVQ VRETAQGHQG TGLGLGIVQS LVRLMGGEIR ITDKAMGEKG TCFQFNVLLT TLESPPVSDM KVRQEIEAGG DYVSTPNLGL
0701: TINTSLGGSM NIRNLSPRFN NCLSSSPKQE GSRVVLLLKN EERRRVTEKY IKNLGIKVTV VEKWEHLSYA LERLFGFSPQ SSMGRAECSL SCPSSRELPF
0801: IGMDGIDSRS QLPKRRSISF SAVVLLVIDA KTGPFFELCD IVKQFRRGLP HGISCKVVWL NESSTRVSER GDISCSRPLH GSRLMEVLKM LPEFGGTVLK
0901: EPPTELQRES LLRHSFVAER SPKHKVQEEG PSSMFNKKLG KRIMASTDSE SETRVKSVRT GRKPIGNPED EQETSKPSDD EFLRGKRVLV VDDNFISRKV
1001: ATGKLKKMGV SEVEQCDSGK EALRLVTEGL TQREEQGSVD KLPFDYIFMD CQMPEMDGYE ATREIRKVEK SYGVRTPIIA VSGHDPGSEE ARETIQAGMD
1101: AFLDKSLNQL ANVIREIESK RH

Arabidopsis Description

CKI1Histidine kinase CKI1 [Source:UniProtKB/Swiss-Prot;Acc:O22267]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.