Factsheet for Os06t0183200-01

Subcellular Localization

min:

: max

Winner_takes_all: golgi, plasma membrane, endoplasmic reticulum

Predictor Summary:

nucleus 1
endoplasmic reticulum 3
extracellular 2
golgi 3
plasma membrane 3
vacuole 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, plasma membrane
Any Predictor:	mitochondrion, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	golgi

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0527600-01
Os09t0566550-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G47430.1	Os02t0527600-01	AT5G03730.1	9560288
AT2G47430.1	Os09t0566550-01	AT5G03730.1	9560288

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G340900.1	Wheat	endoplasmic reticulum, golgi	41.22	58.86
TraesCS5B01G533800.1	Wheat	endoplasmic reticulum, golgi	41.13	58.72
Zm00001d012994_P001	Maize	extracellular, golgi, vacuole	41.13	58.64
Zm00001d035846_P001	Maize	extracellular	54.77	55.41
KXG19481	Sorghum	plasma membrane	57.35	55.09
TraesCS7D01G148100.1	Wheat	plasma membrane	53.53	51.85
TraesCS7A01G146600.1	Wheat	plasma membrane	53.44	51.8
TraesCS7D01G148700.1	Wheat	peroxisome, plasma membrane, plastid	46.76	50.88
TraesCS7B01G049100.1	Wheat	plasma membrane	53.44	50.77
KXG26059	Sorghum	endoplasmic reticulum, extracellular, golgi	27.29	50.53
TraesCS7D01G148400.1	Wheat	endoplasmic reticulum, plasma membrane	44.18	50.49
TraesCS7B01G049400.1	Wheat	plasma membrane	48.57	48.71
HORVU7Hr1G030040.2	Barley	extracellular	44.56	45.12
GSMUA_Achr3P22920_001	Banana	extracellular	33.68	36.77
Solyc12g099720.1.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	22.81	32.3
PGSC0003DMT400011818	Potato	extracellular, golgi, peroxisome	23.19	31.72
Os06t0654300-00	Rice	cytosol, mitochondrion, plastid	3.44	28.35
VIT_07s0005g01380.t01	Wine grape	plasma membrane	29.1	27.88
Bra032761.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	26.81	27.05
CDY01193	Canola	endoplasmic reticulum, golgi, plasma membrane	26.72	26.22
KRH68254	Soybean	cytosol	26.24	26.04
CDY12735	Canola	endoplasmic reticulum, golgi, plasma membrane	26.34	25.92
AT2G47430.1	Thale cress	plasma membrane	27.29	25.49
CDX80103	Canola	endoplasmic reticulum, golgi, plasma membrane	27.0	25.43
CDY55381	Canola	endoplasmic reticulum, plasma membrane, plastid	26.91	24.69
Os02t0738400-01	Rice	mitochondrion	19.56	20.26
Os03t0717700-01	Rice	cytosol, mitochondrion, plasma membrane	18.8	19.6
Os01t0923700-04	Rice	endoplasmic reticulum, golgi, peroxisome	18.51	18.96
Os10t0362300-03	Rice	extracellular	20.52	18.11
Os03t0701700-02	Rice	cytosol, plasma membrane, vacuole	9.54	15.72
Os05t0155200-01	Rice	plasma membrane	6.97	14.09
Os04t0169100-02	Rice	plasma membrane	9.06	12.45
Os02t0820900-03	Rice	mitochondrion	9.26	11.6
Os07t0259100-01	Rice	mitochondrion, plasma membrane	8.59	11.58

Protein Annotations

Gene3D:1.10.287.130	MapMan:11.4.2.3	Gene3D:3.40.50.2300	EMBL:AP008212	EMBL:AP014962	ProteinID:BAD72542.1
InterPro:CheY-like_superfamily	ncoils:Coil	ProteinID:FAA00247.1	GO:GO:0000155	GO:GO:0000160	GO:GO:0003674
GO:GO:0003824	GO:GO:0004673	GO:GO:0004871	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005886	GO:GO:0006464	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009719	GO:GO:0009736	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0016772	GO:GO:0018106	GO:GO:0019538	GO:GO:0023014
GO:GO:0038023	InterPro:HATPase_C	InterPro:HATPase_C_sf	InterPro:HisK_dim/P	InterPro:HisK_dim/P_sf	InterPro:His_kinase_dom
InterPro:IPR001789	InterPro:IPR005467	InterPro:IPR036890	EnsemblPlantsGene:Os06g0183200	EnsemblPlants:Os06t0183200-01	PFAM:PF00072
PFAM:PF02518	PRINTS:PR00344	PFscan:PS50109	PFscan:PS50110	PANTHER:PTHR43711	PANTHER:PTHR43711:SF1
UniProt:Q5SML4	SMART:SM00387	SMART:SM00388	SMART:SM00448	SUPFAM:SSF47384	SUPFAM:SSF52172
SUPFAM:SSF55874	InterPro:Sig_transdc_His_kin-like_C	InterPro:Sig_transdc_resp-reg_receiver	TMHMM:TMhelix	UniParc:UPI000046D521	SEG:seg

Description

HISTIDINE KINASE 1Histidine kinase, Cytokinin signaling (Os06t0183200-01)

Coordinates

chr6:-:4142851..4150976

Molecular Weight (calculated)

114681.0 Da

IEP (calculated)

6.657

GRAVY (calculated)

-0.102

Length

1048 amino acids

Sequence
(BLAST)

0001: MREVEEVSKW RRRCCYFWIL FPLAVIATCM TITVVTFCSS TMYMTEVMGE ATKGAMDSAL MHIAGNMRPL LEANRSVFTI ANTLHVQGNM ASFSHVGPKL
0101: FLAFSMQPLQ AQISYAAVDG AAFAYYRAGG GDGEARAMFA RPNGTWFTQA VDPATGRPVG NATAAAPHQQ LPPNVTRLLL DGGGGGASLA DGWARPGVRM
0201: LFLSAPVGGG GGAVSAAVAV DDVVLRGAAG LRQLRDLGMY YAVAGNGGAT AAPPAPEPAA YRSLLGDGAA AEEMALFSSV KCTASAIDAP PKLDVHGVKS
0301: DKYRFACTNF DISGVQMGFR VVLRKSAMVG VFRRGGVTMV AVACAAAAAA TVACVLMARA LRRAVAREAA LGADLARHRD ALRQAERKSM NKSNAFASAS
0401: HDIRSALAAV AGLVEVSRPE ANPNIVDNLN QMELCTNKLL DILNSILDTT KVESGKVQLE EVEFNMADVL EESVDMANVV GITKGIEVIW DPCDFSVMKC
0501: DNIIGDSKRF KQILDNLLGN AMKFTQEGHV ILRAWANRPI ARGSIGAPSR FAYRSLENNF FSFFFGAKED RVSQNSFNPL QNDPNSVEFY FEVVDTGIGI
0601: PKEKRESVFE NYVQVKEGHG GTGLGLGIVQ SFVRLMGGEI SIKEKEPGER GTCFGFNVLL KTSGNQAAEE DIEEGPSTVS ELDIRASVFR ETNCFKGWHC
0701: ILFVHGDETR RVLQAWMESI GMKVWMVPGV ESISSTLEKA RSSRDDCDVD RCFSSKEMVS QVLPTTLRNN NIMARNLGEH HPLGMLLIVD VSNGQLENIQ
0801: RQARDFTQMR SQVPCKFVCL TDLRTSYKDF RRFEEMSCDL ILRKPVHGSR LYSLLMTLRD VQSSPMHRSS LVGHENYVTR HQDSANIVAL AEVGRLDQGL
0901: KTEEDRPLDG MHVLLVEDTL VLQTIQRKML NQLGAIVELA GDGAKAVDMF RDAIERASVS EEHSVPLPYD VIFMDCQMPR MDGYEATRRI REEESRYGIR
1001: TPIIALTAHS MEDDLQKAID VGMDLHMTKP IERRRIVEAV HGVCKGKN

Best Arabidopsis Sequence Match ( AT2G47430.1 )
(BLAST)

0001: MMVKVTKLVA SRPIVVFCVL AFLVVVFECI WISNWRTTTE NLVKEVASFT EDLRTSLVSE IENIGKFTYA KTNLSTIGLA RVIDSYITNN DTGFTEIQTQ
0101: IAPLLFVAYS TILQVSQVSY ISRDGLMFSY IAESNTSVAV FANSSSNSSR GDYTWYTQTV DQLTGRLNGN STKSQSLDVT HTDWFQAAQS NNYTTAFVGT
0201: SLGGEDNETL IQSVVSLYSK KGLVSLGFPV KTLTEVLNSL NLHGEELYMW TKDGTVLVRE GSLNDSFFIS NGSICFGRES NSLWSQCIPE NCSSSGYEVE
0301: IKRLRYQAFC SVIEVSGVPL RYTLMFPNKG GATRIKHQAE KAKYQLIVVM IFLGFGWPVW FVWFMMQATR REMHMRATLI NQMEATQQAE RKSMNKSQAF
0401: ANASHDIRGA LAGMKGLIDI CRDGVKPGSD VDTTLNQVNV CAKDLVALLN SVLDMSKIES GKMQLVEEDF NLSKLLEDVI DFYHPVAMKK GVDVVLDPHD
0501: GSVFKFSNVR GDSGRLKQIL NNLVSNAVKF TVDGHIAVRA WAQRPGSNSS VVLASYPKGV SKFVKSMFCK NKEESSTYET EISNSIRNNA NTMEFVFEVD
0601: DTGKGIPMEM RKSVFENYVQ VRETAQGHQG TGLGLGIVQS LVRLMGGEIR ITDKAMGEKG TCFQFNVLLT TLESPPVSDM KVRQEIEAGG DYVSTPNLGL
0701: TINTSLGGSM NIRNLSPRFN NCLSSSPKQE GSRVVLLLKN EERRRVTEKY IKNLGIKVTV VEKWEHLSYA LERLFGFSPQ SSMGRAECSL SCPSSRELPF
0801: IGMDGIDSRS QLPKRRSISF SAVVLLVIDA KTGPFFELCD IVKQFRRGLP HGISCKVVWL NESSTRVSER GDISCSRPLH GSRLMEVLKM LPEFGGTVLK
0901: EPPTELQRES LLRHSFVAER SPKHKVQEEG PSSMFNKKLG KRIMASTDSE SETRVKSVRT GRKPIGNPED EQETSKPSDD EFLRGKRVLV VDDNFISRKV
1001: ATGKLKKMGV SEVEQCDSGK EALRLVTEGL TQREEQGSVD KLPFDYIFMD CQMPEMDGYE ATREIRKVEK SYGVRTPIIA VSGHDPGSEE ARETIQAGMD
1101: AFLDKSLNQL ANVIREIESK RH

Arabidopsis Description

CKI1Histidine kinase CKI1 [Source:UniProtKB/Swiss-Prot;Acc:O22267]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.