Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
- extracellular 3
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 4
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS4A01G302000.1 | |
| TraesCS4B01G012100.1 | |
| TraesCS4D01G010200.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G47430.1 | TraesCS4A01G302000.1 | AT5G03730.1 | 9560288 |
| AT2G47430.1 | TraesCS4B01G012100.1 | AT5G03730.1 | 9560288 |
| AT2G47430.1 | TraesCS4D01G010200.1 | AT5G03730.1 | 9560288 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G148700.1 | Wheat | peroxisome, plasma membrane, plastid | 77.97 | 74.25 |
| TraesCS7B01G049400.1 | Wheat | plasma membrane | 79.17 | 69.47 |
| TraesCS7D01G148100.1 | Wheat | plasma membrane | 67.83 | 57.49 |
| Zm00001d012994_P001 | Maize | extracellular, golgi, vacuole | 39.69 | 49.52 |
| KXG26059 | Sorghum | endoplasmic reticulum, extracellular, golgi | 27.59 | 44.7 |
| Os06t0183200-01 | Rice | endoplasmic reticulum, golgi, plasma membrane | 50.49 | 44.18 |
| Zm00001d035846_P001 | Maize | extracellular | 45.8 | 40.54 |
| KXG19481 | Sorghum | plasma membrane | 47.55 | 39.96 |
| GSMUA_Achr3P22920_001 | Banana | extracellular | 33.37 | 31.88 |
| Solyc12g099720.1.1 | Tomato | endoplasmic reticulum, extracellular, plasma membrane | 25.41 | 31.49 |
| PGSC0003DMT400011818 | Potato | extracellular, golgi, peroxisome | 25.3 | 30.29 |
| KRH68254 | Soybean | cytosol | 29.23 | 25.38 |
| Bra032761.1-P | Field mustard | endoplasmic reticulum, golgi, plasma membrane | 27.92 | 24.64 |
| VIT_07s0005g01380.t01 | Wine grape | plasma membrane | 28.68 | 24.04 |
| CDY01193 | Canola | endoplasmic reticulum, golgi, plasma membrane | 27.7 | 23.78 |
| AT2G47430.1 | Thale cress | plasma membrane | 28.46 | 23.26 |
| CDY12735 | Canola | endoplasmic reticulum, golgi, plasma membrane | 26.94 | 23.19 |
| CDX80103 | Canola | endoplasmic reticulum, golgi, plasma membrane | 26.72 | 22.01 |
| CDY55381 | Canola | endoplasmic reticulum, plasma membrane, plastid | 26.94 | 21.63 |
| TraesCS6D01G291900.1 | Wheat | mitochondrion | 17.12 | 16.19 |
| TraesCS3D01G426600.1 | Wheat | plasma membrane | 17.45 | 16.08 |
| TraesCS4D01G050400.1 | Wheat | cytosol | 16.9 | 15.56 |
| TraesCS7D01G485500.1 | Wheat | nucleus | 14.83 | 14.04 |
| TraesCS5D01G002600.1 | Wheat | cytosol, plasma membrane, vacuole | 9.6 | 13.9 |
| TraesCS4D01G036400.2 | Wheat | cytosol, golgi, plasma membrane | 9.27 | 13.39 |
| TraesCS1D01G105600.1 | Wheat | cytosol, golgi, plasma membrane | 9.05 | 12.99 |
| TraesCS2D01G000500.1 | Wheat | plasma membrane | 9.38 | 11.08 |
| TraesCS6D01G266200.1 | Wheat | plasma membrane | 8.51 | 10.74 |
| TraesCS6D01G383600.1 | Wheat | mitochondrion | 9.16 | 10.71 |
| TraesCS2D01G472500.1 | Wheat | cytosol | 6.43 | 10.26 |
| TraesCS6D01G308300.1 | Wheat | plasma membrane | 7.74 | 9.75 |
Protein Annotations
| Gene3D:1.10.287.130 | MapMan:11.4.2.3 | Gene3D:3.40.50.2300 | InterPro:CheY-like_superfamily | ncoils:Coil | GO:GO:0000155 |
| GO:GO:0000160 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004871 | GO:GO:0006464 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016310 |
| GO:GO:0016740 | GO:GO:0016772 | GO:GO:0019538 | GO:GO:0038023 | InterPro:HATPase_C | InterPro:HATPase_C_sf |
| InterPro:HisK_dim/P_sf | InterPro:His_kinase_dom | InterPro:IPR001789 | InterPro:IPR005467 | InterPro:IPR036890 | PFAM:PF00072 |
| PFAM:PF02518 | PRINTS:PR00344 | PFscan:PS50109 | PFscan:PS50110 | PANTHER:PTHR43047 | SMART:SM00387 |
| SMART:SM00448 | SUPFAM:SSF47384 | SUPFAM:SSF52172 | SUPFAM:SSF55874 | InterPro:Sig_transdc_His_kin-like_C | InterPro:Sig_transdc_resp-reg_receiver |
| TMHMM:TMhelix | EnsemblPlantsGene:TraesCS7D01G148400 | EnsemblPlants:TraesCS7D01G148400.1 | TIGR:cd00075 | TIGR:cd00156 | SEG:seg |
Description
No Description!
Coordinates
chr7D:-:95147575..95152029
Molecular Weight (calculated)
100671.0 Da
IEP (calculated)
8.023
GRAVY (calculated)
-0.189
Length
917 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTQADVVTG YYVGPYMFMA LAMQQQVAEM SYTSVNGTTL TYYRAENGQQ SGKLVSQRGK WYTEQAVDPV PGPIDEAGAP TQRDTAPRRC QQRLARGALG
101: RVGSLQRPGD GLLRAARPDR RGLRRRPRRR PDDYYAITDK RSGTASVYKP LAGGRPGHDA ELMKTLFSDT NCTASAINKP DIGVWLVLSE WSGATKVRRI
201: GVAILCIMCA VTILAMVVCF LMARVLWKVG VREVALEAEL AQQKKALQQT ERKSMNKSNA FARASHNICS SLAAVAGLIE ISRLEARGNT NLTYNLNQMD
301: VGTNKLFDIL NTILDMGKLD SGKIQLEEVE FRMAHVLEES MDLANVVGMS RGVEVIWDPC NFSVIRCTAA VGDCKRVKQI LDNLLGNAIK FTHEGHVMLR
401: AWANRPIIRG SMISTSSKFA SRRRVGGVFG WLLGRSENCA EQNGGLSLKI DPDSVEFYFE VVDTGVGIPG EKREYVFENY VQVKDGHGGT GLGLGIVQSF
501: VRLMGGEISI KDKEPGEAGT CFGFNVFLKA SESSEVEDNL EEGRAAPSLF REPACFKGGH CVLLVHSNET RRILHAWMES VGMKVWPVSC AELLAPTIDK
601: VCSTFSSSSS RPASMWSLHS ARGDDLHDTV DRCLVSKEMA SHLRSSGGMG GNHAGHLHAF SLLVVVDVSA GRLHEAAREA ASLARTKLQA SCKVVCLTDL
701: KTPSEDLRRF KEASSFDLEL RKPIHGSRLH KLLQVMRDLQ ESPFEHPHPY QFEMSAADQT TAPASEITPA MPVGPANVGD CKPLKGMRVL LVDDTMLLQR
801: IHGKMLSDLG AAVEIAGDGS VALAMFTEAL RNAFPYDVVL MDCQMPVMNG YEATRRIREE ESRHGVRTPI IMLTANSVEE GLQEAVEAGM DLHLRKPIPK
901: PKIVGVVLEL CKQDKNW
101: RVGSLQRPGD GLLRAARPDR RGLRRRPRRR PDDYYAITDK RSGTASVYKP LAGGRPGHDA ELMKTLFSDT NCTASAINKP DIGVWLVLSE WSGATKVRRI
201: GVAILCIMCA VTILAMVVCF LMARVLWKVG VREVALEAEL AQQKKALQQT ERKSMNKSNA FARASHNICS SLAAVAGLIE ISRLEARGNT NLTYNLNQMD
301: VGTNKLFDIL NTILDMGKLD SGKIQLEEVE FRMAHVLEES MDLANVVGMS RGVEVIWDPC NFSVIRCTAA VGDCKRVKQI LDNLLGNAIK FTHEGHVMLR
401: AWANRPIIRG SMISTSSKFA SRRRVGGVFG WLLGRSENCA EQNGGLSLKI DPDSVEFYFE VVDTGVGIPG EKREYVFENY VQVKDGHGGT GLGLGIVQSF
501: VRLMGGEISI KDKEPGEAGT CFGFNVFLKA SESSEVEDNL EEGRAAPSLF REPACFKGGH CVLLVHSNET RRILHAWMES VGMKVWPVSC AELLAPTIDK
601: VCSTFSSSSS RPASMWSLHS ARGDDLHDTV DRCLVSKEMA SHLRSSGGMG GNHAGHLHAF SLLVVVDVSA GRLHEAAREA ASLARTKLQA SCKVVCLTDL
701: KTPSEDLRRF KEASSFDLEL RKPIHGSRLH KLLQVMRDLQ ESPFEHPHPY QFEMSAADQT TAPASEITPA MPVGPANVGD CKPLKGMRVL LVDDTMLLQR
801: IHGKMLSDLG AAVEIAGDGS VALAMFTEAL RNAFPYDVVL MDCQMPVMNG YEATRRIREE ESRHGVRTPI IMLTANSVEE GLQEAVEAGM DLHLRKPIPK
901: PKIVGVVLEL CKQDKNW
0001: MMVKVTKLVA SRPIVVFCVL AFLVVVFECI WISNWRTTTE NLVKEVASFT EDLRTSLVSE IENIGKFTYA KTNLSTIGLA RVIDSYITNN DTGFTEIQTQ
0101: IAPLLFVAYS TILQVSQVSY ISRDGLMFSY IAESNTSVAV FANSSSNSSR GDYTWYTQTV DQLTGRLNGN STKSQSLDVT HTDWFQAAQS NNYTTAFVGT
0201: SLGGEDNETL IQSVVSLYSK KGLVSLGFPV KTLTEVLNSL NLHGEELYMW TKDGTVLVRE GSLNDSFFIS NGSICFGRES NSLWSQCIPE NCSSSGYEVE
0301: IKRLRYQAFC SVIEVSGVPL RYTLMFPNKG GATRIKHQAE KAKYQLIVVM IFLGFGWPVW FVWFMMQATR REMHMRATLI NQMEATQQAE RKSMNKSQAF
0401: ANASHDIRGA LAGMKGLIDI CRDGVKPGSD VDTTLNQVNV CAKDLVALLN SVLDMSKIES GKMQLVEEDF NLSKLLEDVI DFYHPVAMKK GVDVVLDPHD
0501: GSVFKFSNVR GDSGRLKQIL NNLVSNAVKF TVDGHIAVRA WAQRPGSNSS VVLASYPKGV SKFVKSMFCK NKEESSTYET EISNSIRNNA NTMEFVFEVD
0601: DTGKGIPMEM RKSVFENYVQ VRETAQGHQG TGLGLGIVQS LVRLMGGEIR ITDKAMGEKG TCFQFNVLLT TLESPPVSDM KVRQEIEAGG DYVSTPNLGL
0701: TINTSLGGSM NIRNLSPRFN NCLSSSPKQE GSRVVLLLKN EERRRVTEKY IKNLGIKVTV VEKWEHLSYA LERLFGFSPQ SSMGRAECSL SCPSSRELPF
0801: IGMDGIDSRS QLPKRRSISF SAVVLLVIDA KTGPFFELCD IVKQFRRGLP HGISCKVVWL NESSTRVSER GDISCSRPLH GSRLMEVLKM LPEFGGTVLK
0901: EPPTELQRES LLRHSFVAER SPKHKVQEEG PSSMFNKKLG KRIMASTDSE SETRVKSVRT GRKPIGNPED EQETSKPSDD EFLRGKRVLV VDDNFISRKV
1001: ATGKLKKMGV SEVEQCDSGK EALRLVTEGL TQREEQGSVD KLPFDYIFMD CQMPEMDGYE ATREIRKVEK SYGVRTPIIA VSGHDPGSEE ARETIQAGMD
1101: AFLDKSLNQL ANVIREIESK RH
0101: IAPLLFVAYS TILQVSQVSY ISRDGLMFSY IAESNTSVAV FANSSSNSSR GDYTWYTQTV DQLTGRLNGN STKSQSLDVT HTDWFQAAQS NNYTTAFVGT
0201: SLGGEDNETL IQSVVSLYSK KGLVSLGFPV KTLTEVLNSL NLHGEELYMW TKDGTVLVRE GSLNDSFFIS NGSICFGRES NSLWSQCIPE NCSSSGYEVE
0301: IKRLRYQAFC SVIEVSGVPL RYTLMFPNKG GATRIKHQAE KAKYQLIVVM IFLGFGWPVW FVWFMMQATR REMHMRATLI NQMEATQQAE RKSMNKSQAF
0401: ANASHDIRGA LAGMKGLIDI CRDGVKPGSD VDTTLNQVNV CAKDLVALLN SVLDMSKIES GKMQLVEEDF NLSKLLEDVI DFYHPVAMKK GVDVVLDPHD
0501: GSVFKFSNVR GDSGRLKQIL NNLVSNAVKF TVDGHIAVRA WAQRPGSNSS VVLASYPKGV SKFVKSMFCK NKEESSTYET EISNSIRNNA NTMEFVFEVD
0601: DTGKGIPMEM RKSVFENYVQ VRETAQGHQG TGLGLGIVQS LVRLMGGEIR ITDKAMGEKG TCFQFNVLLT TLESPPVSDM KVRQEIEAGG DYVSTPNLGL
0701: TINTSLGGSM NIRNLSPRFN NCLSSSPKQE GSRVVLLLKN EERRRVTEKY IKNLGIKVTV VEKWEHLSYA LERLFGFSPQ SSMGRAECSL SCPSSRELPF
0801: IGMDGIDSRS QLPKRRSISF SAVVLLVIDA KTGPFFELCD IVKQFRRGLP HGISCKVVWL NESSTRVSER GDISCSRPLH GSRLMEVLKM LPEFGGTVLK
0901: EPPTELQRES LLRHSFVAER SPKHKVQEEG PSSMFNKKLG KRIMASTDSE SETRVKSVRT GRKPIGNPED EQETSKPSDD EFLRGKRVLV VDDNFISRKV
1001: ATGKLKKMGV SEVEQCDSGK EALRLVTEGL TQREEQGSVD KLPFDYIFMD CQMPEMDGYE ATREIRKVEK SYGVRTPIIA VSGHDPGSEE ARETIQAGMD
1101: AFLDKSLNQL ANVIREIESK RH
Arabidopsis Description
CKI1Histidine kinase CKI1 [Source:UniProtKB/Swiss-Prot;Acc:O22267]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.