Factsheet for TraesCS6D01G291900.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 6
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G342700.1	Wheat	mitochondrion	98.87	98.87
TraesCS6A01G312500.2	Wheat	cytosol	98.25	96.56
HORVU6Hr1G077070.5	Barley	mitochondrion	96.8	89.51
Os02t0738400-01	Rice	mitochondrion	84.64	81.13
EES07292	Sorghum	mitochondrion	81.34	81.09
Zm00001d017977_P002	Maize	mitochondrion	81.24	80.9
Zm00001d051812_P003	Maize	mitochondrion	80.72	80.31
Zm00001d023818_P001	Maize	cytosol	21.96	73.96
TraesCS4D01G050400.1	Wheat	cytosol	61.13	59.54
CDY03102	Canola	cytosol	4.33	58.33
CDY03106	Canola	cytosol	4.23	56.94
KRH49704	Soybean	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	57.94	56.94
VIT_01s0011g06190.t01	Wine grape	mitochondrion	61.34	56.72
PGSC0003DMT400075775	Potato	endoplasmic reticulum, golgi, plasma membrane	57.63	56.35
Solyc04g008110.2.1	Tomato	plasma membrane	57.32	55.99
KRH70376	Soybean	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	58.25	55.45
KRH41756	Soybean	golgi	57.63	55.02
Bra024849.1-P	Field mustard	cytosol, peroxisome, plasma membrane	58.97	55.0
KRH60456	Soybean	golgi	56.91	54.6
CDY17631	Canola	cytosol, peroxisome, plasma membrane	59.07	54.47
CDY03101	Canola	cytosol, peroxisome, plasma membrane	58.97	54.37
AT2G01830.2	Thale cress	cytosol	58.87	52.87
KRH49494	Soybean	mitochondrion	31.24	48.64
TraesCS3D01G426600.1	Wheat	plasma membrane	47.32	46.13
TraesCS5D01G002600.1	Wheat	cytosol, plasma membrane, vacuole	13.71	21.01
TraesCS7D01G485500.1	Wheat	nucleus	20.52	20.54
TraesCS4D01G036400.2	Wheat	cytosol, golgi, plasma membrane	13.3	20.32
TraesCS1D01G105600.1	Wheat	cytosol, golgi, plasma membrane	12.27	18.62
TraesCS7D01G148400.1	Wheat	endoplasmic reticulum, plasma membrane	16.19	17.12
TraesCS7D01G148100.1	Wheat	plasma membrane	18.66	16.73
TraesCS2D01G472500.1	Wheat	cytosol	9.79	16.52
TraesCS7D01G148700.1	Wheat	peroxisome, plasma membrane, plastid	16.19	16.3
TraesCS6D01G383600.1	Wheat	mitochondrion	12.99	16.07
TraesCS2D01G000500.1	Wheat	plasma membrane	12.68	15.85
TraesCS6D01G308300.1	Wheat	plasma membrane	11.65	15.52
TraesCS6D01G266200.1	Wheat	plasma membrane	11.34	15.15

Protein Annotations

Gene3D:1.10.287.130	MapMan:11.4.2.1	Gene3D:3.30.450.350	Gene3D:3.40.50.2300	InterPro:CHASE_dom	InterPro:CheY-like_superfamily
ncoils:Coil	GO:GO:0000155	GO:GO:0000160	GO:GO:0003674	GO:GO:0003824	GO:GO:0004871
GO:GO:0006464	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0016772	GO:GO:0019538	GO:GO:0038023
InterPro:HATPase_C	InterPro:HATPase_C_sf	InterPro:HisK_dim/P	InterPro:HisK_dim/P_sf	InterPro:His_kinase_dom	InterPro:IPR001789
InterPro:IPR005467	InterPro:IPR006189	InterPro:IPR036890	PFAM:PF00072	PFAM:PF00512	PFAM:PF02518
PFAM:PF03924	PRINTS:PR00344	PFscan:PS50109	PFscan:PS50110	PFscan:PS50839	PFscan:PS51257
PANTHER:PTHR43719	PANTHER:PTHR43719:SF2	SMART:SM00387	SMART:SM00388	SMART:SM00448	SMART:SM01079
SUPFAM:SSF47384	SUPFAM:SSF52172	SUPFAM:SSF55874	InterPro:Sig_transdc_His_kin-like_C	InterPro:Sig_transdc_resp-reg_receiver	TMHMM:TMhelix
EnsemblPlantsGene:TraesCS6D01G291900	EnsemblPlants:TraesCS6D01G291900.1	TIGR:cd00075	TIGR:cd00082	TIGR:cd00156	SEG:seg

Description

No Description!

Coordinates

chr6D:-:402490932..402496838

Molecular Weight (calculated)

108185.0 Da

IEP (calculated)

6.283

GRAVY (calculated)

-0.236

Length

970 amino acids

Sequence
(BLAST)

001: MGKYAARRGW RRLAAVAWLV AAVACSAAVH WQLRRETMER AEERLVSMCE ERARMLQEQF GVTVNHVHAL AILISTFHFE KNPSALDQDT FAKYTARTSF
101: ERPLLNGVAY AQRLFPHEKE TFERQHGWIM RTMNREGAPL QDEYAPVIFS QDTVSYLARM DMMSGEEDRE NILRARETGK PVLTNPFRLL GSNHLGVVLT
201: FAVYRPDLPA DASVEQRVEA TAGYLGGAFD VESLVENLLS KLAGNQDILV NVYDVTNASE PMAMYGSQTP DNKVDLLHVS MLDFGDPFRK HEMRCRYGQK
301: PPMPWSAISN PMGCFVIWML IGYIICAAWS RYDKVSEDCR KMEELKTQAE AADIAKSQFL ATVSHEIRTP MNGVLGMLDM LLGTDLTMTQ KDFAQTAQDC
401: GKALIILIND VLDRAKFEAG RLELEEVPFD LRTLTDDVIS LFASKLRAKC IELAVFVSDD VPKLVTGDPW RFRQILTNLV GNAVKFTERG HVFVRVSLAE
501: NSTMEANRVP NGNLNGKDCK VEPTANGAFN TLSGFQAADE RNSWECFKLL LSDKELLSDE LEGEKSSQND SDHVTLMISI EDTGVGIPLH AQDRVFTPFM
601: QADSSTSRNY GGTGIGLSIS KCLAELMGGQ ISFISRPSIG STFTFSAVVK RASKDTSCDS ERSLSEALPT AFRGMKAILV DGKPVRSAVT RYHLNRLGII
701: VQVVNNMSMG IQAFGKNGAT ESREKPSMLF IENDMWRPET DIQLSNRLHT LRMNGQAHEL PKLILLVTSE ADKDKYGSTF NTVMCKPLRA STIASCLQQL
801: LKVDIPARKE NQNRPSFLRS LLVGKNILVV DDNKVNLRVA QAALKKYGAK VHCVESGKDA ISLLQPPHCF HACFMDVQMP EMDGFEATRQ IREMEKKANE
901: IKREQSSSGE GSTFVEWHLP VLAMTADVIQ ATYEECMKSG MDGYVSKPFD EQQLYQAVSR LVVGTADSAS

Best Arabidopsis Sequence Match ( AT2G01830.2 )
(BLAST)

0001: MRRDFVYNNN AMFNPLTTHY SSDMNWALNN HQEEEEEPRR IEISDSESLE NLKSSDFYQL GGGGALNSSE KPRKIDFWRS GLMGFAKMQQ QQQLQHSVAV
0101: KMNNNNNNDL MGNKKGSTFI QEHRALLPKA LILWIIIVGF ISSGIYQWMD DANKIRREEV LVSMCDQRAR MLQDQFSVSV NHVHALAILV STFHYHKNPS
0201: AIDQETFAEY TARTAFERPL LSGVAYAEKV VNFEREMFER QHNWVIKTMD RGEPSPVRDE YAPVIFSQDS VSYLESLDMM SGEEDRENIL RARETGKAVL
0301: TSPFRLLETH HLGVVLTFPV YKSSLPENPT VEERIAATAG YLGGAFDVES LVENLLGQLA GNQAIVVHVY DITNASDPLV MYGNQDEEAD RSLSHESKLD
0401: FGDPFRKHKM ICRYHQKAPI PLNVLTTVPL FFAIGFLVGY ILYGAAMHIV KVEDDFHEMQ ELKVRAEAAD VAKSQFLATV SHEIRTPMNG ILGMLAMLLD
0501: TELSSTQRDY AQTAQVCGKA LIALINEVLD RAKIEAGKLE LESVPFDIRS ILDDVLSLFS EESRNKSIEL AVFVSDKVPE IVKGDSGRFR QIIINLVGNS
0601: VKFTEKGHIF VKVHLAEQSK DESEPKNALN GGVSEEMIVV SKQSSYNTLS GYEAADGRNS WDSFKHLVSE EQSLSEFDIS SNVRLMVSIE DTGIGIPLVA
0701: QGRVFMPFMQ ADSSTSRNYG GTGIGLSISK CLVELMRGQI NFISRPHIGS TFWFTAVLEK CDKCSAINHM KKPNVEHLPS TFKGMKAIVV DAKPVRAAVT
0801: RYHMKRLGIN VDVVTSLKTA VVAAAAFERN GSPLPTKPQL DMILVEKDSW ISTEDNDSEI RLLNSRTNGN VHHKSPKLAL FATNITNSEF DRAKSAGFAD
0901: TVIMKPLRAS MIGACLQQVL ELRKTRQQHP EGSSPATLKS LLTGKKILVV DDNIVNRRVA AGALKKFGAE VVCAESGQVA LGLLQIPHTF DACFMDIQMP
1001: QMDGFEATRQ IRMMEKETKE KTNLEWHLPI LAMTADVIHA TYEECLKSGM DGYVSKPFEE ENLYKSVAKS FKPNPISPSS

Arabidopsis Description

AHK4Histidine kinase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5U0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.