Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 3
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS4A01G302000.1 | |
| TraesCS4B01G012100.1 | |
| TraesCS4D01G010200.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G47430.1 | TraesCS4A01G302000.1 | AT5G03730.1 | 9560288 |
| AT2G47430.1 | TraesCS4B01G012100.1 | AT5G03730.1 | 9560288 |
| AT2G47430.1 | TraesCS4D01G010200.1 | AT5G03730.1 | 9560288 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G148400.1 | Wheat | endoplasmic reticulum, plasma membrane | 74.25 | 77.97 |
| TraesCS7D01G148100.1 | Wheat | plasma membrane | 73.52 | 65.43 |
| Zm00001d012994_P001 | Maize | extracellular, golgi, vacuole | 37.07 | 48.57 |
| Os06t0183200-01 | Rice | endoplasmic reticulum, golgi, plasma membrane | 50.88 | 46.76 |
| Zm00001d035846_P001 | Maize | extracellular | 47.87 | 44.5 |
| KXG19481 | Sorghum | plasma membrane | 49.22 | 43.45 |
| KXG26059 | Sorghum | endoplasmic reticulum, extracellular, golgi | 25.44 | 43.29 |
| GSMUA_Achr3P22920_001 | Banana | extracellular | 32.29 | 32.4 |
| Solyc12g099720.1.1 | Tomato | endoplasmic reticulum, extracellular, plasma membrane | 23.16 | 30.14 |
| PGSC0003DMT400011818 | Potato | extracellular, golgi, peroxisome | 23.05 | 28.98 |
| Bra032761.1-P | Field mustard | endoplasmic reticulum, golgi, plasma membrane | 26.48 | 24.54 |
| KRH68254 | Soybean | cytosol | 26.79 | 24.43 |
| AT2G47430.1 | Thale cress | plasma membrane | 27.73 | 23.8 |
| CDY01193 | Canola | endoplasmic reticulum, golgi, plasma membrane | 26.27 | 23.69 |
| VIT_07s0005g01380.t01 | Wine grape | plasma membrane | 26.9 | 23.67 |
| CDY12735 | Canola | endoplasmic reticulum, golgi, plasma membrane | 25.65 | 23.19 |
| CDX80103 | Canola | endoplasmic reticulum, golgi, plasma membrane | 25.65 | 22.19 |
| CDY55381 | Canola | endoplasmic reticulum, plasma membrane, plastid | 25.86 | 21.8 |
| TraesCS3D01G426600.1 | Wheat | plasma membrane | 16.93 | 16.38 |
| TraesCS6D01G291900.1 | Wheat | mitochondrion | 16.3 | 16.19 |
| TraesCS4D01G050400.1 | Wheat | cytosol | 15.37 | 14.86 |
| TraesCS7D01G485500.1 | Wheat | nucleus | 14.43 | 14.34 |
| TraesCS5D01G002600.1 | Wheat | cytosol, plasma membrane, vacuole | 9.03 | 13.74 |
| TraesCS4D01G036400.2 | Wheat | cytosol, golgi, plasma membrane | 8.83 | 13.39 |
| TraesCS1D01G105600.1 | Wheat | cytosol, golgi, plasma membrane | 8.2 | 12.36 |
| TraesCS2D01G472500.1 | Wheat | cytosol | 6.75 | 11.3 |
| TraesCS2D01G000500.1 | Wheat | plasma membrane | 8.72 | 10.82 |
| TraesCS6D01G383600.1 | Wheat | mitochondrion | 8.52 | 10.46 |
| TraesCS6D01G266200.1 | Wheat | plasma membrane | 7.79 | 10.33 |
| TraesCS6D01G308300.1 | Wheat | plasma membrane | 7.37 | 9.75 |
Protein Annotations
| Gene3D:1.10.287.130 | MapMan:11.4.2.3 | Gene3D:3.40.50.2300 | InterPro:CheY-like_superfamily | ncoils:Coil | GO:GO:0000155 |
| GO:GO:0000160 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004871 | GO:GO:0006464 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 |
| GO:GO:0019538 | GO:GO:0038023 | InterPro:HATPase_C | InterPro:HATPase_C_sf | InterPro:HisK_dim/P_sf | InterPro:His_kinase_dom |
| InterPro:IPR001789 | InterPro:IPR005467 | InterPro:IPR036890 | PFAM:PF00072 | PFAM:PF02518 | PFscan:PS50109 |
| PFscan:PS50110 | PANTHER:PTHR43047 | SMART:SM00387 | SMART:SM00448 | SUPFAM:SSF47384 | SUPFAM:SSF52172 |
| SUPFAM:SSF55874 | InterPro:Sig_transdc_resp-reg_receiver | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS7D01G148700 | EnsemblPlants:TraesCS7D01G148700.1 | TIGR:cd00075 |
| TIGR:cd00156 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr7D:-:96081216..96086023
Molecular Weight (calculated)
104501.0 Da
IEP (calculated)
6.661
GRAVY (calculated)
-0.031
Length
963 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVSLTHVAA GMQSLIEANH SAAVVAHSLQ IPGNKSSHFR HVGPYMFMAL AMQQQVAEMS YTSVNGTTLT YYRAEKGQQS AKLVSQRGKW YTEHAVDPVT
101: GRLTGRPVPA TRPEHLPNAT QLLAAASSGS PVALWAGWVH SSVQVMVFSA PVGQTAVVSA AIPVDVLTIT SLGTAADPSV DTYYAITDKR SGAATVYKPL
201: VGGRPGHDAE LMKTLFSDTN CTASAIDKPN IVLHSVGSDQ VACTSFDLSG VNLGVWLVLS KWSGATKVRQ IGVAVVCIVC AITIVATVVC FLMAQVLWRV
301: RAREVALEAD LVQQKEALQQ TEHKSVNKSN AFARDSHDIR SSLAAVAGLI EISRPETRGN TNLIYNLNQM DVGTNKLFDI LNTILDMGKL ESGKIQIEEV
401: EFRMANVLEE SMDLANVIGM SRGVEVIWDP CDFSVLRCTA TIGDCKRVKQ ILDNLLGNAI KFTHEGHVML RAWANHPTIR GSMISTPSRF GPRRRTGGVF
501: RRMLGRSENC AEQTDGLSLK IDPDSVEFYF EVVDTGVGIP EEKRESIFEN YVRLMGGEIN IKDKEPGEAG TCFGFNVFLK ASESPEIEDN LEEGRAAPSL
601: FREPACFKGG HCILLVHGDE TRRILHTWME SIGTRVWPVS CAELLAPTID KVCSTFGASP SRSASMSLLH SAGGGATDRC FSSKEIVSDL RNSSGMAGNH
701: AGHLHALGLL VVIDVSAGRL HEVAREAASL ARTKLQAPCG VVCLTDLKTP SQDLRRFMEA SSCDLELHKP IHGSRLHKLL QVMRDLQASH FEHLHLYQFE
801: MPAADQTTAS ASEITPAVPM GPANVGDGKP LEGMRVLLVD DTMLLQKIHE PMLSDLGAAV VIAGDGSVAV AMFTEALHNA LPYDVVLMDC QMLVMNGYEA
901: TRRIREEESR YGVRTPIIAL TANSAKERLR EAVEAGMDLH LTKPIPKPKI AGVVLELCKQ DKN
101: GRLTGRPVPA TRPEHLPNAT QLLAAASSGS PVALWAGWVH SSVQVMVFSA PVGQTAVVSA AIPVDVLTIT SLGTAADPSV DTYYAITDKR SGAATVYKPL
201: VGGRPGHDAE LMKTLFSDTN CTASAIDKPN IVLHSVGSDQ VACTSFDLSG VNLGVWLVLS KWSGATKVRQ IGVAVVCIVC AITIVATVVC FLMAQVLWRV
301: RAREVALEAD LVQQKEALQQ TEHKSVNKSN AFARDSHDIR SSLAAVAGLI EISRPETRGN TNLIYNLNQM DVGTNKLFDI LNTILDMGKL ESGKIQIEEV
401: EFRMANVLEE SMDLANVIGM SRGVEVIWDP CDFSVLRCTA TIGDCKRVKQ ILDNLLGNAI KFTHEGHVML RAWANHPTIR GSMISTPSRF GPRRRTGGVF
501: RRMLGRSENC AEQTDGLSLK IDPDSVEFYF EVVDTGVGIP EEKRESIFEN YVRLMGGEIN IKDKEPGEAG TCFGFNVFLK ASESPEIEDN LEEGRAAPSL
601: FREPACFKGG HCILLVHGDE TRRILHTWME SIGTRVWPVS CAELLAPTID KVCSTFGASP SRSASMSLLH SAGGGATDRC FSSKEIVSDL RNSSGMAGNH
701: AGHLHALGLL VVIDVSAGRL HEVAREAASL ARTKLQAPCG VVCLTDLKTP SQDLRRFMEA SSCDLELHKP IHGSRLHKLL QVMRDLQASH FEHLHLYQFE
801: MPAADQTTAS ASEITPAVPM GPANVGDGKP LEGMRVLLVD DTMLLQKIHE PMLSDLGAAV VIAGDGSVAV AMFTEALHNA LPYDVVLMDC QMLVMNGYEA
901: TRRIREEESR YGVRTPIIAL TANSAKERLR EAVEAGMDLH LTKPIPKPKI AGVVLELCKQ DKN
0001: MMVKVTKLVA SRPIVVFCVL AFLVVVFECI WISNWRTTTE NLVKEVASFT EDLRTSLVSE IENIGKFTYA KTNLSTIGLA RVIDSYITNN DTGFTEIQTQ
0101: IAPLLFVAYS TILQVSQVSY ISRDGLMFSY IAESNTSVAV FANSSSNSSR GDYTWYTQTV DQLTGRLNGN STKSQSLDVT HTDWFQAAQS NNYTTAFVGT
0201: SLGGEDNETL IQSVVSLYSK KGLVSLGFPV KTLTEVLNSL NLHGEELYMW TKDGTVLVRE GSLNDSFFIS NGSICFGRES NSLWSQCIPE NCSSSGYEVE
0301: IKRLRYQAFC SVIEVSGVPL RYTLMFPNKG GATRIKHQAE KAKYQLIVVM IFLGFGWPVW FVWFMMQATR REMHMRATLI NQMEATQQAE RKSMNKSQAF
0401: ANASHDIRGA LAGMKGLIDI CRDGVKPGSD VDTTLNQVNV CAKDLVALLN SVLDMSKIES GKMQLVEEDF NLSKLLEDVI DFYHPVAMKK GVDVVLDPHD
0501: GSVFKFSNVR GDSGRLKQIL NNLVSNAVKF TVDGHIAVRA WAQRPGSNSS VVLASYPKGV SKFVKSMFCK NKEESSTYET EISNSIRNNA NTMEFVFEVD
0601: DTGKGIPMEM RKSVFENYVQ VRETAQGHQG TGLGLGIVQS LVRLMGGEIR ITDKAMGEKG TCFQFNVLLT TLESPPVSDM KVRQEIEAGG DYVSTPNLGL
0701: TINTSLGGSM NIRNLSPRFN NCLSSSPKQE GSRVVLLLKN EERRRVTEKY IKNLGIKVTV VEKWEHLSYA LERLFGFSPQ SSMGRAECSL SCPSSRELPF
0801: IGMDGIDSRS QLPKRRSISF SAVVLLVIDA KTGPFFELCD IVKQFRRGLP HGISCKVVWL NESSTRVSER GDISCSRPLH GSRLMEVLKM LPEFGGTVLK
0901: EPPTELQRES LLRHSFVAER SPKHKVQEEG PSSMFNKKLG KRIMASTDSE SETRVKSVRT GRKPIGNPED EQETSKPSDD EFLRGKRVLV VDDNFISRKV
1001: ATGKLKKMGV SEVEQCDSGK EALRLVTEGL TQREEQGSVD KLPFDYIFMD CQMPEMDGYE ATREIRKVEK SYGVRTPIIA VSGHDPGSEE ARETIQAGMD
1101: AFLDKSLNQL ANVIREIESK RH
0101: IAPLLFVAYS TILQVSQVSY ISRDGLMFSY IAESNTSVAV FANSSSNSSR GDYTWYTQTV DQLTGRLNGN STKSQSLDVT HTDWFQAAQS NNYTTAFVGT
0201: SLGGEDNETL IQSVVSLYSK KGLVSLGFPV KTLTEVLNSL NLHGEELYMW TKDGTVLVRE GSLNDSFFIS NGSICFGRES NSLWSQCIPE NCSSSGYEVE
0301: IKRLRYQAFC SVIEVSGVPL RYTLMFPNKG GATRIKHQAE KAKYQLIVVM IFLGFGWPVW FVWFMMQATR REMHMRATLI NQMEATQQAE RKSMNKSQAF
0401: ANASHDIRGA LAGMKGLIDI CRDGVKPGSD VDTTLNQVNV CAKDLVALLN SVLDMSKIES GKMQLVEEDF NLSKLLEDVI DFYHPVAMKK GVDVVLDPHD
0501: GSVFKFSNVR GDSGRLKQIL NNLVSNAVKF TVDGHIAVRA WAQRPGSNSS VVLASYPKGV SKFVKSMFCK NKEESSTYET EISNSIRNNA NTMEFVFEVD
0601: DTGKGIPMEM RKSVFENYVQ VRETAQGHQG TGLGLGIVQS LVRLMGGEIR ITDKAMGEKG TCFQFNVLLT TLESPPVSDM KVRQEIEAGG DYVSTPNLGL
0701: TINTSLGGSM NIRNLSPRFN NCLSSSPKQE GSRVVLLLKN EERRRVTEKY IKNLGIKVTV VEKWEHLSYA LERLFGFSPQ SSMGRAECSL SCPSSRELPF
0801: IGMDGIDSRS QLPKRRSISF SAVVLLVIDA KTGPFFELCD IVKQFRRGLP HGISCKVVWL NESSTRVSER GDISCSRPLH GSRLMEVLKM LPEFGGTVLK
0901: EPPTELQRES LLRHSFVAER SPKHKVQEEG PSSMFNKKLG KRIMASTDSE SETRVKSVRT GRKPIGNPED EQETSKPSDD EFLRGKRVLV VDDNFISRKV
1001: ATGKLKKMGV SEVEQCDSGK EALRLVTEGL TQREEQGSVD KLPFDYIFMD CQMPEMDGYE ATREIRKVEK SYGVRTPIIA VSGHDPGSEE ARETIQAGMD
1101: AFLDKSLNQL ANVIREIESK RH
Arabidopsis Description
CKI1Histidine kinase CKI1 [Source:UniProtKB/Swiss-Prot;Acc:O22267]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.