Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 6
- golgi 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra032761.1-P | Field mustard | endoplasmic reticulum, golgi, plasma membrane | 93.54 | 96.15 |
| CDY12735 | Canola | endoplasmic reticulum, golgi, plasma membrane | 93.54 | 93.8 |
| AT2G47430.1 | Thale cress | plasma membrane | 68.82 | 65.51 |
| CDX80103 | Canola | endoplasmic reticulum, golgi, plasma membrane | 65.07 | 62.44 |
| CDY55381 | Canola | endoplasmic reticulum, plasma membrane, plastid | 65.36 | 61.12 |
| VIT_07s0005g01380.t01 | Wine grape | plasma membrane | 40.26 | 39.31 |
| Solyc12g099720.1.1 | Tomato | endoplasmic reticulum, extracellular, plasma membrane | 27.15 | 39.19 |
| KRH68254 | Soybean | cytosol | 37.55 | 37.97 |
| PGSC0003DMT400011818 | Potato | extracellular, golgi, peroxisome | 26.97 | 37.6 |
| Zm00001d012994_P001 | Maize | extracellular, golgi, vacuole | 23.5 | 34.15 |
| EER94128 | Sorghum | extracellular, plasma membrane | 23.31 | 33.51 |
| TraesCS4A01G340900.1 | Wheat | endoplasmic reticulum, golgi | 22.66 | 32.97 |
| TraesCS5B01G533800.1 | Wheat | endoplasmic reticulum, golgi | 22.28 | 32.43 |
| KXG26059 | Sorghum | endoplasmic reticulum, extracellular, golgi | 16.95 | 31.98 |
| GSMUA_Achr3P22920_001 | Banana | extracellular | 26.78 | 29.79 |
| TraesCS7D01G148400.1 | Wheat | endoplasmic reticulum, plasma membrane | 23.78 | 27.7 |
| Zm00001d035846_P001 | Maize | extracellular | 26.22 | 27.03 |
| TraesCS7A01G146600.1 | Wheat | plasma membrane | 27.15 | 26.83 |
| Os06t0183200-01 | Rice | endoplasmic reticulum, golgi, plasma membrane | 26.22 | 26.72 |
| TraesCS7D01G148100.1 | Wheat | plasma membrane | 26.87 | 26.52 |
| TraesCS7D01G148700.1 | Wheat | peroxisome, plasma membrane, plastid | 23.69 | 26.27 |
| KXG19481 | Sorghum | plasma membrane | 26.78 | 26.21 |
| TraesCS7B01G049100.1 | Wheat | plasma membrane | 26.97 | 26.11 |
| TraesCS7B01G049400.1 | Wheat | plasma membrane | 25.19 | 25.74 |
| HORVU7Hr1G030040.2 | Barley | extracellular | 22.66 | 23.38 |
| CDY03102 | Canola | cytosol | 1.5 | 22.22 |
| CDY64702 | Canola | mitochondrion | 2.72 | 22.14 |
| CDY03106 | Canola | cytosol | 1.4 | 20.83 |
| CDY20843 | Canola | nucleus | 22.19 | 19.87 |
| CDY24380 | Canola | nucleus | 22.1 | 19.77 |
| CDY21123 | Canola | cytosol | 5.52 | 19.67 |
| CDY15717 | Canola | endoplasmic reticulum, golgi, plasma membrane | 17.42 | 18.22 |
| CDY17631 | Canola | cytosol, peroxisome, plasma membrane | 17.6 | 17.87 |
| CDY03101 | Canola | cytosol, peroxisome, plasma membrane | 17.6 | 17.87 |
| CDY03909 | Canola | endoplasmic reticulum, golgi, plasma membrane | 16.67 | 17.78 |
| CDY49633 | Canola | cytosol | 12.08 | 17.55 |
| CDY07498 | Canola | cytosol | 12.08 | 17.53 |
| CDY49629 | Canola | cytosol | 2.25 | 17.27 |
| CDY66567 | Canola | cytosol | 2.25 | 16.44 |
| CDX93074 | Canola | plasma membrane | 16.76 | 16.32 |
| CDX80113 | Canola | plasma membrane | 9.36 | 16.31 |
| CDY50037 | Canola | endoplasmic reticulum, golgi, plasma membrane | 16.67 | 16.2 |
| CDY67688 | Canola | nucleus | 13.67 | 16.03 |
| CDY40112 | Canola | nucleus | 13.67 | 15.94 |
| CDX69808 | Canola | nucleus | 13.11 | 15.59 |
| CDY63851 | Canola | plasma membrane | 9.08 | 15.57 |
| CDX97049 | Canola | nucleus | 13.02 | 15.51 |
| CDY47297 | Canola | plasma membrane | 16.48 | 15.32 |
| CDX74635 | Canola | cytosol, golgi, plasma membrane | 16.29 | 15.14 |
| CDX78398 | Canola | cytosol | 8.52 | 14.49 |
| CDY30004 | Canola | plasma membrane | 9.46 | 13.19 |
| CDX90318 | Canola | cytosol | 3.65 | 12.66 |
| CDY35503 | Canola | plasma membrane | 8.33 | 11.42 |
| CDY70443 | Canola | plasma membrane | 8.24 | 11.28 |
| CDX70367 | Canola | endoplasmic reticulum, golgi | 13.76 | 10.71 |
| CDX86641 | Canola | endoplasmic reticulum | 5.52 | 9.92 |
| CDY67999 | Canola | plasma membrane | 5.52 | 9.53 |
| CDY70681 | Canola | endoplasmic reticulum | 5.34 | 9.24 |
| CDX78397 | Canola | cytosol | 2.72 | 7.53 |
| CDY15498 | Canola | plasma membrane | 7.3 | 4.56 |
Protein Annotations
| Gene3D:1.10.287.130 | MapMan:11.4.2.3 | Gene3D:3.30.565.10 | Gene3D:3.40.50.2300 | GO:A0A078ENT9 | EnsemblPlants:CDY01193 |
| ProteinID:CDY01193 | ProteinID:CDY01193.1 | InterPro:CheY-like_superfamily | GO:GO:0000155 | GO:GO:0000160 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004871 | GO:GO:0006464 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016310 | GO:GO:0016740 | GO:GO:0016772 |
| GO:GO:0019538 | GO:GO:0038023 | EnsemblPlantsGene:GSBRNA2T00111300001 | InterPro:HATPase_C | InterPro:HATPase_C_sf | InterPro:HisK_dim/P |
| InterPro:HisK_dim/P_sf | InterPro:His_kinase_dom | InterPro:IPR001789 | InterPro:IPR005467 | InterPro:IPR036890 | PFAM:PF00072 |
| PFAM:PF02518 | PRINTS:PR00344 | PFscan:PS50109 | PFscan:PS50110 | PFscan:PS51257 | PANTHER:PTHR43719 |
| SMART:SM00387 | SMART:SM00388 | SMART:SM00448 | SUPFAM:SSF47384 | SUPFAM:SSF52172 | SUPFAM:SSF55874 |
| InterPro:Sig_transdc_His_kin-like_C | InterPro:Sig_transdc_resp-reg_receiver | TMHMM:TMhelix | UniParc:UPI0004EF2CAE | SEG:seg | : |
Description
BnaA04g06260D
Coordinates
chrLK031924:+:1028390..1032778
Molecular Weight (calculated)
118333.0 Da
IEP (calculated)
8.866
GRAVY (calculated)
-0.236
Length
1068 amino acids
Sequence
(BLAST)
(BLAST)
0001: MVNVRKFVTS RPIFVFFLLA FLVIVFGCIP VTIWFRTTKN VTDGIVFCTE GLRSSLVSDI ENIGKFTYQK TSSSTTGLAN IIDSYLTNND THFKKIQTQV
0101: APVLFKAYLT IPQVSQVSYI STDGLLFSYK TELNASVAVF ANSSSGKGDY TCYTQTVDQI TGRLTGNATK SKPVDITHKD WFQAAQRNHT TAFVGPGLGG
0201: EVNEAMFQSV VSLYSKKGAV SLGFPVKTLI DSLNRLDLKG GELYLWTKEG TLIVPGRSLN ATFFISNGSI CFGRESSHCI PGNCSSRGYQ VEIGRLKFQA
0301: FCSVLEVSGV PLRYTLMFPN KERGPSIGSA SLYLLVATTL LGLCWPLGFV ACMVNAAGRE MHMRATLIKQ MEATQQAERK SMNKSQAFAR ASHDIRGSLA
0401: GITGLIDLCH ESEEVRRGSN LESRLKLVNG CTKDLLDLLN SVLDTSKIES GNMQLKEEEF NLAKLVEDVI DFFHPVAMKK GVDVVLDMHD GSVFKCSNVR
0501: GDGGKLKQIL NNLVSNAVKF TVEGHISIRA WAQRTSSNVI LAPDNEGGLS KFSKKSKDQA GSMSNSIRNN GNMMEFVFEV DDTGKGIPME MRKSVFENYV
0601: QVRETDQGQQ GTGLGLGIVQ SLVRLMGGEI RIIDKAMGEK GTCFQFNVLL SAASESQVSR QDTEEGEHMP WAINTSSGGS MSIRNMSPRL HNWLSSSPKQ
0701: ERSRVVLLMK DGERRRVTEK YIKSLGIKVT VVKKWEHLNH VLERLGFSRQ GSMGRNESLS SSSRELPLIG MDGIDSRSQT PKRTRHGFSP ALLVVIDAET
0801: GRFLELYDIV EQFRRGLHHG HSCKVVWLND RGHGSLRGDI SCSKPLHGSC LNRVLKMLPE FGGTEPKEDK QGAFKPSEDE LLSGKRVLLV DDDRITSSIA
0901: TIKLKKMGAS EVKQCYNGKE AVRLVSEWLT QREHGEGGSS EVLLPLDYIF MDCQMPEMNG YEATREIRKM EEKYGGGLHI PIIAVSGHDH GSTEARETIQ
1001: AGMDAFLEKN LNHDQLAKVI REITSKWGEY ASIRFTISWM NHLSAFSSFT NFRKQASSIS GRFSFLMP
0101: APVLFKAYLT IPQVSQVSYI STDGLLFSYK TELNASVAVF ANSSSGKGDY TCYTQTVDQI TGRLTGNATK SKPVDITHKD WFQAAQRNHT TAFVGPGLGG
0201: EVNEAMFQSV VSLYSKKGAV SLGFPVKTLI DSLNRLDLKG GELYLWTKEG TLIVPGRSLN ATFFISNGSI CFGRESSHCI PGNCSSRGYQ VEIGRLKFQA
0301: FCSVLEVSGV PLRYTLMFPN KERGPSIGSA SLYLLVATTL LGLCWPLGFV ACMVNAAGRE MHMRATLIKQ MEATQQAERK SMNKSQAFAR ASHDIRGSLA
0401: GITGLIDLCH ESEEVRRGSN LESRLKLVNG CTKDLLDLLN SVLDTSKIES GNMQLKEEEF NLAKLVEDVI DFFHPVAMKK GVDVVLDMHD GSVFKCSNVR
0501: GDGGKLKQIL NNLVSNAVKF TVEGHISIRA WAQRTSSNVI LAPDNEGGLS KFSKKSKDQA GSMSNSIRNN GNMMEFVFEV DDTGKGIPME MRKSVFENYV
0601: QVRETDQGQQ GTGLGLGIVQ SLVRLMGGEI RIIDKAMGEK GTCFQFNVLL SAASESQVSR QDTEEGEHMP WAINTSSGGS MSIRNMSPRL HNWLSSSPKQ
0701: ERSRVVLLMK DGERRRVTEK YIKSLGIKVT VVKKWEHLNH VLERLGFSRQ GSMGRNESLS SSSRELPLIG MDGIDSRSQT PKRTRHGFSP ALLVVIDAET
0801: GRFLELYDIV EQFRRGLHHG HSCKVVWLND RGHGSLRGDI SCSKPLHGSC LNRVLKMLPE FGGTEPKEDK QGAFKPSEDE LLSGKRVLLV DDDRITSSIA
0901: TIKLKKMGAS EVKQCYNGKE AVRLVSEWLT QREHGEGGSS EVLLPLDYIF MDCQMPEMNG YEATREIRKM EEKYGGGLHI PIIAVSGHDH GSTEARETIQ
1001: AGMDAFLEKN LNHDQLAKVI REITSKWGEY ASIRFTISWM NHLSAFSSFT NFRKQASSIS GRFSFLMP
0001: MMVKVTKLVA SRPIVVFCVL AFLVVVFECI WISNWRTTTE NLVKEVASFT EDLRTSLVSE IENIGKFTYA KTNLSTIGLA RVIDSYITNN DTGFTEIQTQ
0101: IAPLLFVAYS TILQVSQVSY ISRDGLMFSY IAESNTSVAV FANSSSNSSR GDYTWYTQTV DQLTGRLNGN STKSQSLDVT HTDWFQAAQS NNYTTAFVGT
0201: SLGGEDNETL IQSVVSLYSK KGLVSLGFPV KTLTEVLNSL NLHGEELYMW TKDGTVLVRE GSLNDSFFIS NGSICFGRES NSLWSQCIPE NCSSSGYEVE
0301: IKRLRYQAFC SVIEVSGVPL RYTLMFPNKG GATRIKHQAE KAKYQLIVVM IFLGFGWPVW FVWFMMQATR REMHMRATLI NQMEATQQAE RKSMNKSQAF
0401: ANASHDIRGA LAGMKGLIDI CRDGVKPGSD VDTTLNQVNV CAKDLVALLN SVLDMSKIES GKMQLVEEDF NLSKLLEDVI DFYHPVAMKK GVDVVLDPHD
0501: GSVFKFSNVR GDSGRLKQIL NNLVSNAVKF TVDGHIAVRA WAQRPGSNSS VVLASYPKGV SKFVKSMFCK NKEESSTYET EISNSIRNNA NTMEFVFEVD
0601: DTGKGIPMEM RKSVFENYVQ VRETAQGHQG TGLGLGIVQS LVRLMGGEIR ITDKAMGEKG TCFQFNVLLT TLESPPVSDM KVRQEIEAGG DYVSTPNLGL
0701: TINTSLGGSM NIRNLSPRFN NCLSSSPKQE GSRVVLLLKN EERRRVTEKY IKNLGIKVTV VEKWEHLSYA LERLFGFSPQ SSMGRAECSL SCPSSRELPF
0801: IGMDGIDSRS QLPKRRSISF SAVVLLVIDA KTGPFFELCD IVKQFRRGLP HGISCKVVWL NESSTRVSER GDISCSRPLH GSRLMEVLKM LPEFGGTVLK
0901: EPPTELQRES LLRHSFVAER SPKHKVQEEG PSSMFNKKLG KRIMASTDSE SETRVKSVRT GRKPIGNPED EQETSKPSDD EFLRGKRVLV VDDNFISRKV
1001: ATGKLKKMGV SEVEQCDSGK EALRLVTEGL TQREEQGSVD KLPFDYIFMD CQMPEMDGYE ATREIRKVEK SYGVRTPIIA VSGHDPGSEE ARETIQAGMD
1101: AFLDKSLNQL ANVIREIESK RH
0101: IAPLLFVAYS TILQVSQVSY ISRDGLMFSY IAESNTSVAV FANSSSNSSR GDYTWYTQTV DQLTGRLNGN STKSQSLDVT HTDWFQAAQS NNYTTAFVGT
0201: SLGGEDNETL IQSVVSLYSK KGLVSLGFPV KTLTEVLNSL NLHGEELYMW TKDGTVLVRE GSLNDSFFIS NGSICFGRES NSLWSQCIPE NCSSSGYEVE
0301: IKRLRYQAFC SVIEVSGVPL RYTLMFPNKG GATRIKHQAE KAKYQLIVVM IFLGFGWPVW FVWFMMQATR REMHMRATLI NQMEATQQAE RKSMNKSQAF
0401: ANASHDIRGA LAGMKGLIDI CRDGVKPGSD VDTTLNQVNV CAKDLVALLN SVLDMSKIES GKMQLVEEDF NLSKLLEDVI DFYHPVAMKK GVDVVLDPHD
0501: GSVFKFSNVR GDSGRLKQIL NNLVSNAVKF TVDGHIAVRA WAQRPGSNSS VVLASYPKGV SKFVKSMFCK NKEESSTYET EISNSIRNNA NTMEFVFEVD
0601: DTGKGIPMEM RKSVFENYVQ VRETAQGHQG TGLGLGIVQS LVRLMGGEIR ITDKAMGEKG TCFQFNVLLT TLESPPVSDM KVRQEIEAGG DYVSTPNLGL
0701: TINTSLGGSM NIRNLSPRFN NCLSSSPKQE GSRVVLLLKN EERRRVTEKY IKNLGIKVTV VEKWEHLSYA LERLFGFSPQ SSMGRAECSL SCPSSRELPF
0801: IGMDGIDSRS QLPKRRSISF SAVVLLVIDA KTGPFFELCD IVKQFRRGLP HGISCKVVWL NESSTRVSER GDISCSRPLH GSRLMEVLKM LPEFGGTVLK
0901: EPPTELQRES LLRHSFVAER SPKHKVQEEG PSSMFNKKLG KRIMASTDSE SETRVKSVRT GRKPIGNPED EQETSKPSDD EFLRGKRVLV VDDNFISRKV
1001: ATGKLKKMGV SEVEQCDSGK EALRLVTEGL TQREEQGSVD KLPFDYIFMD CQMPEMDGYE ATREIRKVEK SYGVRTPIIA VSGHDPGSEE ARETIQAGMD
1101: AFLDKSLNQL ANVIREIESK RH
Arabidopsis Description
CKI1Histidine kinase CKI1 [Source:UniProtKB/Swiss-Prot;Acc:O22267]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.