CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
CDY07498
CDY49629
CDY49633
CDY66567

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G04580.1	CDY07498	AT1G66340.1	18577522
AT3G04580.1	CDY49629	AT1G66340.1	18577522
AT3G04580.1	CDY49633	AT1G66340.1	18577522
AT3G04580.1	CDY66567	AT1G66340.1	18577522

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG98373	Soybean	extracellular	54.96	41.14
CDY21123	Canola	cytosol	89.31	39.0
CDY49629	Canola	cytosol	25.19	23.74
CDY66567	Canola	cytosol	24.43	21.92
CDY03102	Canola	cytosol	11.45	20.83
CDY03106	Canola	cytosol	10.69	19.44
CDY30004	Canola	plasma membrane	89.31	15.27
AT3G04580.1	Thale cress	plasma membrane	88.55	15.14
VIT_14s0081g00630.t01	Wine grape	plasma membrane	58.02	10.0
KRH68803	Soybean	plasma membrane	58.02	9.9
KRG92613	Soybean	plasma membrane	57.25	9.79
KRH34165	Soybean	plasma membrane	56.49	9.65
PGSC0003DMT400073847	Potato	plasma membrane	55.73	9.52
Solyc05g055070.2.1	Tomato	plasma membrane	53.44	9.4
PGSC0003DMT400060160	Potato	endoplasmic reticulum	54.2	9.31
Solyc11g006180.1.1	Tomato	plasma membrane	54.2	9.26
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, extracellular, plasma membrane	45.04	9.05
HORVU6Hr1G080180.1	Barley	cytosol	34.35	8.95
GSMUA_Achr11P...	Banana	plasma membrane	48.85	8.44
EES10426	Sorghum	plasma membrane	47.33	8.02
Os04t0169100-02	Rice	plasma membrane	46.56	7.99
CDY70443	Canola	plasma membrane	47.33	7.95
Zm00001d025050_P001	Maize	cytosol, golgi, plasma membrane	48.09	7.84
GSMUA_Achr8P14350_001	Banana	endoplasmic reticulum	44.27	7.66
TraesCS2D01G000500.1	Wheat	plasma membrane	45.04	7.6
CDY35503	Canola	plasma membrane	45.04	7.57
TraesCS2A01G000200.1	Wheat	plasma membrane	44.27	7.46
TraesCS2B01G023800.1	Wheat	plasma membrane	43.51	7.41
Zm00001d004372_P003	Maize	plasma membrane	43.51	7.4
HORVU2Hr1G000030.1	Barley	plasma membrane	43.51	7.35
HORVU0Hr1G001750.2	Barley	endoplasmic reticulum	43.51	7.34
KRG97057	Soybean	plasma membrane	38.17	6.84
TraesCS6A01G285800.1	Wheat	plasma membrane	36.64	6.59
Zm00001d051889_P002	Maize	endoplasmic reticulum	37.4	6.5
TraesCS6D01G308300.1	Wheat	plasma membrane	35.88	6.46
TraesCS6B01G360200.1	Wheat	cytosol, endoplasmic reticulum, golgi	35.88	6.46
TraesCS6D01G266200.1	Wheat	plasma membrane	35.11	6.34
OQU85974	Sorghum	plasma membrane	37.4	6.31
TraesCS6B01G314600.1	Wheat	plasma membrane	35.11	6.31
HORVU6Hr1G071860.2	Barley	plasma membrane	34.35	6.23
TraesCS6A01G329400.1	Wheat	plasma membrane	34.35	6.16
TraesCS6D01G383600.1	Wheat	mitochondrion	35.88	5.99
TraesCS6B01G439600.1	Wheat	mitochondrion	35.88	5.99
TraesCS6A01G399400.2	Wheat	mitochondrion, plasma membrane	36.64	5.93
HORVU6Hr1G091700.6	Barley	cytosol, mitochondrion, plasma membrane	36.64	5.84
KXG36402	Sorghum	plasma membrane	37.4	5.73
EES06508	Sorghum	mitochondrion, plasma membrane	35.88	5.68
Os07t0259100-01	Rice	mitochondrion, plasma membrane	32.82	5.53
Zm00001d053594_P001	Maize	plasma membrane	33.59	5.48
Os02t0820900-03	Rice	mitochondrion	32.82	5.14
CDY07498	Canola	cytosol	28.24	5.03
Zm00001d021687_P001	Maize	plasma membrane	32.06	4.91
CDY49633	Canola	cytosol	27.48	4.9
Solyc01g014770.1.1	Tomato	cytosol	4.58	4.48
CDY03909	Canola	endoplasmic reticulum, golgi, plasma membrane	29.77	3.9
CDY15717	Canola	endoplasmic reticulum, golgi, plasma membrane	29.77	3.82
CDY03101	Canola	cytosol, peroxisome, plasma membrane	29.77	3.71
CDY17631	Canola	cytosol, peroxisome, plasma membrane	29.77	3.71
CDX93074	Canola	plasma membrane	30.53	3.65
CDY50037	Canola	endoplasmic reticulum, golgi, plasma membrane	30.53	3.64
CDY67688	Canola	nucleus	25.19	3.62
CDY40112	Canola	nucleus	25.19	3.6
CDX97049	Canola	nucleus	24.43	3.57
CDX69808	Canola	nucleus	24.43	3.56
CDY20843	Canola	nucleus	31.3	3.44
CDY24380	Canola	nucleus	31.3	3.43
CDY47297	Canola	plasma membrane	27.48	3.13
CDX74635	Canola	cytosol, golgi, plasma membrane	27.48	3.13
CDY01193	Canola	endoplasmic reticulum, golgi, plasma membrane	22.14	2.72
CDY55381	Canola	endoplasmic reticulum, plasma membrane, plastid	22.9	2.63
CDY15498	Canola	plasma membrane	32.06	2.46
CDY12735	Canola	endoplasmic reticulum, golgi, plasma membrane	19.85	2.44
CDX80103	Canola	endoplasmic reticulum, golgi, plasma membrane	20.61	2.43
CDX70367	Canola	endoplasmic reticulum, golgi	25.19	2.41
CDX86641	Canola	endoplasmic reticulum	9.16	2.02
CDY70681	Canola	endoplasmic reticulum	8.4	1.78
CDY67999	Canola	plasma membrane	7.63	1.62
CDX78397	Canola	cytosol	1.53	0.52
Solyc12g027610.1.1	Tomato	cytosol	0.76	0.51
CDY63851	Canola	plasma membrane	2.29	0.48
CDX80113	Canola	plasma membrane	1.53	0.33
CDX90318	Canola	cytosol	0.76	0.32
Solyc04g064840.1.1	Tomato	endoplasmic reticulum	0.0	0.0
HORVU6Hr1G080170.1	Barley	plasma membrane	0.0	0.0
Solyc04g025660.1.1	Tomato	cytosol	0.0	0.0
CDX78398	Canola	cytosol	0.0	0.0
Solyc04g049320.1.1	Tomato	cytosol, plastid, vacuole	0.0	0.0
Solyc04g049990.1.1	Tomato	cytosol	0.0	0.0
Solyc06g036450.1.1	Tomato	cytosol	0.0	0.0
Solyc06g051610.1.1	Tomato	cytosol	0.0	0.0
Solyc08g068360.1.1	Tomato	cytosol	0.0	0.0
Solyc09g011680.1.1	Tomato	cytosol	0.0	0.0
Solyc09g065310.1.1	Tomato	cytosol	0.0	0.0
Solyc09g082910.1.1	Tomato	cytosol	0.0	0.0
Solyc11g065590.1.1	Tomato	cytosol	0.0	0.0
Solyc12g062760.1.1	Tomato	cytosol	0.0	0.0
Solyc12g044870.1.1	Tomato	cytosol	0.0	0.0
Solyc12g038690.1.1	Tomato	cytosol	0.0	0.0

Protein Annotations

Gene3D:3.40.50.2300	MapMan:35.1	GO:A0A078JH11	UniProt:A0A078JH11	EnsemblPlants:CDY64702	ProteinID:CDY64702
ProteinID:CDY64702.1	InterPro:CheY-like_superfamily	ncoils:Coil	GO:GO:0000160	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00042574001
InterPro:IPR001789	PFAM:PF00072	PFscan:PS50110	PANTHER:PTHR43719	PANTHER:PTHR43719:SF6	SUPFAM:SSF52172
InterPro:Sig_transdc_resp-reg_receiver	UniParc:UPI0004EDE466	:	:	:	:

Description

BnaCnng44580DBnaCnng44580D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JH11]

Coordinates

chrLK034525:-:15622..16104

Molecular Weight (calculated)

15048.7 Da

IEP (calculated)

9.657

GRAVY (calculated)

-0.149

Length

131 amino acids

Sequence
(BLAST)

001: MQLVLRFQTR PSVRRLMLAG KAPGLQHPNS NSILRGLIIT LAYDDVNRTV TKRLLEKIGC EMPEMDGFEV AMKIRKFYEY HWPLIIALTA STEDHVRERC
101: LQMGVNGMIQ KPILLHVMDS ELRRALQSAS E

Best Arabidopsis Sequence Match ( AT3G04580.1 )
(BLAST)

001: MLRSLGLGLL LFALLALVSG DNDYVSCNCD DEGFLSVHTI LECQRVSDLL IAIAYFSIPL ELLYFISFSN VPFKWVLVQF IAFIVLCGMT HLLNAWTYYG
101: PHSFQLMLWL TIFKFLTALV SCATAITLLT LIPLLLKWKV RELYLKQNVL ELNEEVGLMK RQKEMSVQVR MLTREIRKSL DKHMILRTTL VELSKILDLQ
201: NSAVWMPNEN RTEMHLTHEL RANPMRSFRV IPINDPDVVQ VRETKVVTIL RKNSVLAVES SGCGGSEEFG PVAAIRMPML HGLNFKGGTP EFVDTPYAIM
301: VLVLPSANSR VWTDKEIEIA EVVADQVAVA ISHASVLEES QLMREKLGIQ NRALLRAKQN AMMASQARNT CQKVMSHGMR RPMHTILGLL SMFQSESMSL
401: DQKIIVDALM KTSTVLSALI NDVIDISPKD NGKSALEVKR FQLHSLIREA ACVAKCLSVY KGYGFEMDVQ TRLPNLVVGD EKRTFQLVMY MLGYILDMTD
501: GGKTVTFRVI CEGTGTSQDK SKRETGMWKS HMSDDSLGVK FEVEINEIQN PPLDGSAMAM RHIPNRRYHS NGIKEGLSLG MCRKLAQMMQ GNIWISPKSH
601: GQTQSMQLVL RFQTRPSIRR SILAGNAPEL QHPNSNSILR GLRITLADDD DVNRTVTKRL LEKLGCEVTA VSSGFECLNA LSNVEMSYRV VILDLQMPEM
701: DGFEVAMKIR KFCGHHWPLI IALTASTEDH VRERCLQMGM NGMIQKPVLL HVMASELRRA LQTASE

Arabidopsis Description

EIN4EIN4 [Source:UniProtKB/TrEMBL;Acc:A0A178VKQ4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.