Factsheet for GSMUA_AchrUn_randomP07710_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane

Predictor Summary:

nucleus 2
extracellular 5
endoplasmic reticulum 5
vacuole 4
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	endoplasmic reticulum

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr11P...
GSMUA_Achr11P...
GSMUA_Achr11P...
GSMUA_Achr8P07600_001
GSMUA_Achr8P14350_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G04310.1	GSMUA_Achr11P...	AT1G04310.1	18577522
AT1G04310.1	GSMUA_Achr8P14350_001	AT1G04310.1	18577522
AT1G04310.1	GSMUA_AchrUn_...	AT1G04310.1	18577522
AT3G23150.1	GSMUA_Achr11P...	AT5G03730.1	12177468
AT3G23150.1	GSMUA_Achr11P...	AT5G03730.1	12177468
AT3G23150.1	GSMUA_Achr8P07600_001	AT5G03730.1	12177468

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	plasma membrane	56.9	48.94
GSMUA_Achr8P14350_001	Banana	endoplasmic reticulum	55.52	47.82
VIT_05s0049g00090.t01	Wine grape	plasma membrane	53.99	46.07
PGSC0003DMT400073847	Potato	plasma membrane	53.83	45.76
VIT_14s0081g00630.t01	Wine grape	plasma membrane	52.91	45.39
Solyc11g006180.1.1	Tomato	plasma membrane	53.22	45.24
CDY64702	Canola	mitochondrion	9.05	45.04
PGSC0003DMT400060160	Potato	endoplasmic reticulum	50.46	43.12
Solyc06g053710.2.1	Tomato	plasma membrane	50.0	42.84
Solyc05g055070.2.1	Tomato	plasma membrane	48.62	42.55
PGSC0003DMT400041983	Potato	plasma membrane	49.54	42.44
Bra023756.1-P	Field mustard	plasma membrane	50.61	42.31
CDY35503	Canola	plasma membrane	50.15	41.98
CDY70443	Canola	plasma membrane	50.15	41.92
KRH31729	Soybean	endoplasmic reticulum	15.34	41.84
AT3G04580.1	Thale cress	plasma membrane	48.77	41.51
Bra040134.1-P	Field mustard	plasma membrane	48.62	41.38
CDY30004	Canola	plasma membrane	48.47	41.25
AT3G23150.1	Thale cress	endoplasmic reticulum, plasma membrane	48.01	40.49
PGSC0003DMT400044244	Potato	plasma membrane	42.64	36.92
Solyc04g049320.1.1	Tomato	cytosol, plastid, vacuole	6.13	36.36
Solyc09g089610.2.1	Tomato	endoplasmic reticulum	41.72	36.07
Solyc12g038690.1.1	Tomato	cytosol	3.53	35.94
Solyc09g065310.1.1	Tomato	cytosol	3.53	35.94
Solyc09g011680.1.1	Tomato	cytosol	5.67	35.58
Solyc04g025660.1.1	Tomato	cytosol	5.67	35.58
GSMUA_Achr11P...	Banana	cytosol	19.94	35.33
GSMUA_Achr7P26840_001	Banana	plasma membrane	34.97	34.39
CDX86641	Canola	endoplasmic reticulum	31.14	34.12
Bra015303.1-P	Field mustard	endoplasmic reticulum	31.75	33.6
CDY70681	Canola	endoplasmic reticulum	31.75	33.55
CDY67999	Canola	plasma membrane	31.75	33.44
AT1G04310.1	Thale cress	endoplasmic reticulum	32.98	33.33
Solyc11g065590.1.1	Tomato	cytosol	4.6	33.33
CDY21123	Canola	cytosol	15.18	33.0
Solyc06g051610.1.1	Tomato	cytosol	8.28	32.53
Solyc12g062760.1.1	Tomato	cytosol	4.14	30.68
Solyc12g044870.1.1	Tomato	cytosol	7.67	30.12
Solyc09g082910.1.1	Tomato	cytosol	7.67	30.12
Solyc12g027610.1.1	Tomato	cytosol	8.9	29.74
Solyc06g036450.1.1	Tomato	cytosol	4.45	29.0
Solyc04g064840.1.1	Tomato	endoplasmic reticulum	7.98	28.73
Solyc01g014770.1.1	Tomato	cytosol	5.83	28.36
Solyc08g068360.1.1	Tomato	cytosol	5.21	28.33
GSMUA_Achr11P...	Banana	cytosol	25.15	25.83
Solyc04g049990.1.1	Tomato	cytosol	5.06	25.19
GSMUA_Achr5P21290_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	20.86	23.57
GSMUA_Achr5P00120_001	Banana	cytosol	10.28	18.72
CDY15498	Canola	plasma membrane	37.58	14.33
Bra030564.1-P	Field mustard	plasma membrane	36.96	14.32
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, peroxisome, plasma membrane	17.64	11.79
GSMUA_Achr10P...	Banana	cytosol	15.64	11.55
GSMUA_AchrUn_...	Banana	cytosol, golgi, plasma membrane	17.64	11.52
GSMUA_Achr1P23390_001	Banana	cytosol	15.34	11.44
GSMUA_Achr4P15980_001	Banana	cytosol	17.48	11.42
GSMUA_Achr4P17470_001	Banana	cytosol	13.5	11.35
GSMUA_Achr7P11260_001	Banana	mitochondrion	15.8	11.31
GSMUA_AchrUn_...	Banana	cytosol	16.26	11.13
GSMUA_Achr8P22930_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	13.96	10.73
GSMUA_Achr1P22740_001	Banana	cytosol	12.88	10.32
GSMUA_Achr3P22920_001	Banana	extracellular	12.58	8.54

Protein Annotations

Gene3D:1.10.287.130	Gene3D:3.40.50.2300	MapMan:35.1	InterPro:CheY-like_superfamily	GO:GO:0000155	GO:GO:0000160
GO:GO:0003674	GO:GO:0003824	GO:GO:0004871	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0006464	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0023014
GO:GO:0038023	EnsemblPlantsGene:GSMUA_AchrUn_randomG07710_001	EnsemblPlants:GSMUA_AchrUn_randomP07710_001	EnsemblPlants:GSMUA_AchrUn_randomT07710_001	InterPro:HisK_dim/P	InterPro:HisK_dim/P_sf
InterPro:IPR001789	UniProt:M0U782	PFAM:PF00072	PFscan:PS50110	PANTHER:PTHR43719	PANTHER:PTHR43719:SF6
SMART:SM00448	SUPFAM:SSF47384	SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	SignalP:SignalP-TM	TMHMM:TMhelix
UniParc:UPI0002953EFF	SEG:seg	:	:	:	:

Description

Putative Ethylene receptor 2 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG07710_001]

Coordinates

chrchrUn_random:+:32625632..32628403

Molecular Weight (calculated)

72845.6 Da

IEP (calculated)

8.014

GRAVY (calculated)

0.153

Length

652 amino acids

Sequence
(BLAST)

001: MSRAFCHGLL ILSSLPLATA AEIDLPLCDC DGDGLWSIDS IRSWQKVSDF LIAAAYFSIP LELLYFVTCS NLFPFKWILF QFSAFIVLCG LTHLLNVFTY
101: KPHSFLLVLA LTVSKFLTAL VSFLTAITLL TLIPQLLKRQ EEASWHVRML TQEIRKSLDK HTILYTTLVE LSKTLQLQNC AVWMPNENEL EMNLTHELNG
201: RRASSDLDTL SIPMDDPDVA HVKKCDAVAA IRMPMLKVSD FKGGTPEVLQ ACYAILVLSH MIRDKLVEQN RVLLQARKNV MMANEAWNLF RKIMNQGIRS
301: PIHSILGLLS IMQQGNLTPE QRLIVNTMAK TGGVVSALIN DTLEINSEHF TLEMKPFQLQ PLIKEAACIA RCLCDSRGFG FGFQNLRDQR WVWRSKFSNV
401: NSCVKFEMAI RRSLCSNSSS SVQHDRKQNG EGFDTGFFSL GMCKKLVQVA ISFGGTNATG SKVSMVMIKR KIDISSFDSL ILLSCHGLPE CVTLLLRLPL
501: QPPMPISDLE GPLERRHHFS SSSSSSLLEG LQVLLVDDDG INRKVTHKLL EKLGCCVSPL STGAECLSSI GTSGTQFQLV VLDLNMPMMN GYEVATKVRD
601: MRTGCRPLIV ALTASTEEHV WERCVKSGMN GLIRKPVVLP ELERELLRAL TT

Best Arabidopsis Sequence Match ( AT3G23150.1 )
(BLAST)

001: MVKEIASWLL ILSMVVFVSP VLAINGGGYP RCNCEDEGNS FWSTENILET QRVSDFLIAV AYFSIPIELL YFVSCSNVPF KWVLFEFIAF IVLCGMTHLL
101: HGWTYSAHPF RLMMAFTVFK MLTALVSCAT AITLITLIPL LLKVKVREFM LKKKAHELGR EVGLILIKKE TGFHVRMLTQ EIRKSLDRHT ILYTTLVELS
201: KTLGLQNCAV WMPNDGGTEM DLTHELRGRG GYGGCSVSME DLDVVRIRES DEVNVLSVDS SIARASGGGG DVSEIGAVAA IRMPMLRVSD FNGELSYAIL
301: VCVLPGGTPR DWTYQEIEIV KVVADQVTVA LDHAAVLEES QLMREKLAEQ NRALQMAKRD ALRASQARNA FQKTMSEGMR RPMHSILGLL SMIQDEKLSD
401: EQKMIVDTMV KTGNVMSNLV GDSMDVPDGR FGTEMKPFSL HRTIHEAACM ARCLCLCNGI RFLVDAEKSL PDNVVGDERR VFQVILHIVG SLVKPRKRQE
501: GSSLMFKVLK ERGSLDRSDH RWAAWRSPAS SADGDVYIRF EMNVENDDSS SQSFASVSSR DQEVGDVRFS GGYGLGQDLS FGVCKKVVQL IHGNISVVPG
601: SDGSPETMSL LLRFRRRPSI SVHGSSESPA PDHHAHPHSN SLLRGLQVLL VDTNDSNRAV TRKLLEKLGC DVTAVSSGFD CLTAIAPGSS SPSTSFQVVV
701: LDLQMAEMDG YEVAMRIRSR SWPLIVATTV SLDEEMWDKC AQIGINGVVR KPVVLRAMES ELRRVLLQAD QLL

Arabidopsis Description

ETR2Ethylene receptor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q0WPQ2]
SUBAcon: [endoplasmic reticulum,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.