Factsheet for GSMUA_Achr8P07600_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr11P...
GSMUA_Achr11P...
GSMUA_Achr11P...
GSMUA_Achr3P22920_001
GSMUA_Achr5P00120_001
GSMUA_Achr5P21290_001
GSMUA_Achr8P14350_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G03730.1	GSMUA_Achr11P...	AT2G40940.1	9560288
AT5G03730.1	GSMUA_Achr11P...	AT2G40940.1	9560288
AT5G03730.1	GSMUA_Achr5P00120_001	AT2G40940.1	9560288
AT5G03730.1	GSMUA_Achr5P21290_001	AT2G40940.1	9560288
AT5G03730.1	GSMUA_Achr3P22920_001	AT2G47430.1	9560288
AT5G03730.1	GSMUA_Achr11P...	AT3G23150.1	12177468
AT5G03730.1	GSMUA_Achr8P14350_001	AT3G23150.1	12177468
AT5G03730.1	GSMUA_AchrUn_...	AT3G23150.1	12177468

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol	73.6	76.9
GSMUA_Achr11P...	Banana	cytosol, plastid	70.61	76.16
Os09t0566550-01	Rice	cytosol, plastid	58.42	65.11
OQU89015	Sorghum	cytosol	58.06	63.61
Zm00001d005348_P001	Maize	cytosol	57.95	63.07
TraesCS4D01G010200.1	Wheat	plastid	57.95	62.99
HORVU4Hr1G001850.1	Barley	plastid	58.06	62.87
TraesCS4B01G012100.1	Wheat	plastid	57.95	62.82
TraesCS4A01G302000.1	Wheat	plastid	57.95	62.74
CDY10360	Canola	cytosol	54.6	62.35
CDX70289	Canola	cytosol	54.72	61.31
VIT_08s0007g03910.t01	Wine grape	cytosol	62.25	60.86
Solyc09g009090.2.1	Tomato	cytosol	60.45	60.45
KRH20027	Soybean	cytosol	60.1	60.17
PGSC0003DMT400021612	Potato	cytosol	56.87	60.1
KRH32650	Soybean	cytosol	59.86	59.93
Solyc10g085570.1.1	Tomato	cytosol	56.51	59.65
KRH67846	Soybean	cytosol	57.59	59.51
CDX80884	Canola	cytosol	56.27	59.32
KRG96132	Soybean	cytosol	57.23	59.28
CDY11267	Canola	cytosol	56.03	58.92
Bra005778.1-P	Field mustard	cytosol	55.91	58.87
AT5G03730.1	Thale cress	cytosol	56.87	57.98
Bra009514.1-P	Field mustard	plastid	52.69	57.87
VIT_13s0074g00430.t01	Wine grape	cytosol	52.21	57.65
Solyc10g083610.1.1	Tomato	cytosol	55.91	56.45
KRH71740	Soybean	cytosol	43.13	54.7
KRH33179	Soybean	cytosol	22.94	50.39
GSMUA_Achr4P15150_001	Banana	mitochondrion	9.56	42.78
GSMUA_Achr11P...	Banana	cytosol	42.05	40.79
GSMUA_AchrUn_...	Banana	cytosol	15.29	37.65
GSMUA_Achr2P16720_001	Banana	cytosol	32.74	35.31
GSMUA_Achr1P14150_001	Banana	cytosol, plastid	32.62	32.69
GSMUA_Achr7P09040_001	Banana	mitochondrion	33.69	31.69
GSMUA_Achr2P08840_001	Banana	cytosol, plastid	33.45	31.11
GSMUA_Achr10P...	Banana	cytosol	33.81	30.96
GSMUA_Achr5P27150_001	Banana	cytosol	25.09	29.17
GSMUA_Achr11P...	Banana	cytosol	23.66	28.61
GSMUA_Achr3P24310_001	Banana	cytosol	24.01	28.11
GSMUA_Achr8P06350_001	Banana	cytosol	25.45	27.84
GSMUA_Achr4P08050_001	Banana	cytosol	24.01	25.9
GSMUA_Achr5P09170_001	Banana	cytosol	24.73	25.52
GSMUA_Achr4P15160_001	Banana	cytosol	17.08	20.34
GSMUA_Achr1P24220_001	Banana	cytosol	18.04	17.24
GSMUA_AchrUn_...	Banana	cytosol, nucleus, plastid	9.08	16.31
GSMUA_Achr11P...	Banana	cytosol	17.32	14.63
GSMUA_Achr11P...	Banana	mitochondrion	19.0	14.55
GSMUA_Achr8P13260_001	Banana	cytosol	19.47	13.73
GSMUA_Achr6P30410_001	Banana	cytosol	16.49	13.27
GSMUA_Achr6P03910_001	Banana	cytosol	14.34	13.11
GSMUA_Achr3P00910_001	Banana	cytosol	16.61	13.11
GSMUA_Achr7P05160_001	Banana	cytosol	16.25	12.92
GSMUA_Achr6P06270_001	Banana	cytosol	18.28	12.81
GSMUA_Achr10P...	Banana	cytosol	16.73	12.66

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
MapMan:18.4.1.30	Gene3D:3.30.200.20	InterPro:CTR1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr8G07600_001
EnsemblPlants:GSMUA_Achr8P07600_001	EnsemblPlants:GSMUA_Achr8T07600_001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0TNG3	PFAM:PF07714
PFAM:PF14381	PRINTS:PR00109	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR44329
PANTHER:PTHR44329:SF1	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_AS	UniParc:UPI000295C8CD	SEG:seg	:	:	:

Description

Serine/threonine-protein kinase CTR1 [Source:GMGC_GENE;Acc:GSMUA_Achr8G07600_001]

Coordinates

chr8:-:5073616..5084358

Molecular Weight (calculated)

91703.3 Da

IEP (calculated)

6.406

GRAVY (calculated)

-0.309

Length

837 amino acids

Sequence
(BLAST)

001: MEMPGRRSSY SLLGQSPDDA PLPKFESPPS DKARPRPSPS PFDWPMAPAV PSAMTHLQRQ SSGSSYGGSS LSGDYYMPTT LASATVDSDA FNPMAAAGGE
101: GRSKDGAAAA EAAAVGPSSS SAKSWAQQAE ETYQLQLALA LRLCSEAACA DDPNFLDAVD QMVLPERAAP ASMSHRFWVN GCLSYHDKIP DGFYLIQGMD
201: PFVWTLCADV GEENRIPSIE SLKTVHPSDS SIEVALIDRQ YDPDLRQLQS LVAGISCTCN TPKDMVEQLA KLVCTCMGGT AFNEEDGLLH RWKECSEALK
301: ASSGSVVLPI GKLSAGLCRH RALLFKMLAD TIKLPCRVAK GCKYCKSDSG SSCLVDLGQE REYLVDLIRS PGNLFEPNSL LNGPYSISIS SPLRPPKIRS
401: TTVTVDFRTL AKQYFLDCQS LNLFFNDPSA GAAVAQGDAT DPPSPRPFDE KSMEMSSSPL RGIGTEFSDL SQPLGQEVAL PDGDTNVAKL KKMLNPSQNV
501: ISPALLEQDV AQLKLTSQAG CREVPQIIPP SDLKAEKKKD FRFIEDSRKG GNRSNNDISL AVDDLSIPWS ELILKERIGA GSFGTVHRAE WHGSDVAVKI
601: LMEQDFHPER IKEFRREVAI MKSLRHPNIV LFMGAVTEPP KLSIVTEYLS RGSLYRILHR NGAREILDER RRLSMASDVA KGMNYLHNRS TPIVHRDLKS
701: PNLLVDKKYT VKVCDFGLSR LKANTFLSSK SLAGTPEWMA PEVLRDEPSN EKSDVYSFGV ILWELMTLQQ PWSNLNPAQV VAAVGFKGRR LEIPSDVNPH
801: VAAIIESCWA NEPWKRPSFS SITESLKPLI KPLSPQP

Best Arabidopsis Sequence Match ( AT5G03730.2 )
(BLAST)

001: MEMPGRRSNY TLLSQFSDDQ VSVSVTGAPP PHYDSLSSEN RSNHNSGNTG KAKAERGGFD WDPSGGGGGD HRLNNQPNRV GNNMYASSLG LQRQSSGSSF
101: GESSLSGDYY MPTLSAAANE IESVGFPQDD GFRLGFGGGG GDLRIQMAAD SAGGSSSGKS WAQQTEESYQ LQLALALRLS SEATCADDPN FLDPVPDESA
201: LRTSPSSAET VSHRFWVNGC LSYYDKVPDG FYMMNGLDPY IWTLCIDLHE SGRIPSIESL RAVDSGVDSS LEAIIVDRRS DPAFKELHNR VHDISCSCIT
301: TKEVVDQLAK LICNRMGGPV IMGEDELVPM WKECIDGLKE IFKVVVPIGS LSVGLCRHRA LLFKVLADII DLPCRIAKGC KYCNRDDAAS CLVRFGLDRE
401: YLVDLVGKPG HLWEPDSLLN GPSSISISSP LRFPRPKPVE PAVDFRLLAK QYFSDSQSLN LVFDPASDDM GFSMFHRQYD NPGGENDALA ENGGGSLPPS
501: ANMPPQNMMR ASNQIEAAPM NAPPISQPVP NRANRELGLD GDDMDIPWCD LNIKEKIGAG SFGTVHRAEW HGSDVAVKIL MEQDFHAERV NEFLREVAIM
601: KRLRHPNIVL FMGAVTQPPN LSIVTEYLSR GSLYRLLHKS GAREQLDERR RLSMAYDVAK GMNYLHNRNP PIVHRDLKSP NLLVDKKYTV KVCDFGLSRL
701: KASTFLSSKS AAGTPEWMAP EVLRDEPSNE KSDVYSFGVI LWELATLQQP WGNLNPAQVV AAVGFKCKRL EIPRNLNPQV AAIIEGCWTN EPWKRPSFAT
801: IMDLLRPLIK SAVPPPNRSD L

Arabidopsis Description

CTR1Serine/threonine-protein kinase CTR1 [Source:UniProtKB/Swiss-Prot;Acc:Q05609]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.