Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, plastid
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX80103
CDX80113
CDY01193
CDY07498
CDY12735
CDY35503
CDY49629
CDY49633
CDY55381
CDY63851
CDY66567
CDY70443

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G03730.1 CDY07498 AT1G66340.1 12837948
AT5G03730.1 CDY49629 AT1G66340.1 12837948
AT5G03730.1 CDY49633 AT1G66340.1 12837948
AT5G03730.1 CDY66567 AT1G66340.1 12837948
AT5G03730.1 CDY07498 AT1G66340.1 8417317
AT5G03730.1 CDY49629 AT1G66340.1 8417317
AT5G03730.1 CDY49633 AT1G66340.1 8417317
AT5G03730.1 CDY66567 AT1G66340.1 8417317
AT5G03730.1 CDY07498 AT1G66340.1 9560288
AT5G03730.1 CDY49629 AT1G66340.1 9560288
AT5G03730.1 CDY49633 AT1G66340.1 9560288
AT5G03730.1 CDY66567 AT1G66340.1 9560288
AT5G03730.1 CDX80113 AT2G40940.1 9560288
AT5G03730.1 CDY63851 AT2G40940.1 9560288
AT5G03730.1 CDX80103 AT2G47430.1 9560288
AT5G03730.1 CDY01193 AT2G47430.1 9560288
AT5G03730.1 CDY12735 AT2G47430.1 9560288
AT5G03730.1 CDY55381 AT2G47430.1 9560288
AT5G03730.1 CDY35503 AT3G23150.1 12177468
AT5G03730.1 CDY70443 AT3G23150.1 12177468
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY11267 Canola cytosol 98.74 98.49
Bra005778.1-P Field mustard cytosol 98.49 98.36
CDY10360 Canola cytosol 86.15 93.32
CDX70289 Canola cytosol 85.64 91.03
AT5G03730.1 Thale cress cytosol 92.7 89.65
Solyc09g009090.2.1 Tomato cytosol 68.51 64.99
PGSC0003DMT400021612 Potato cytosol 64.23 64.39
VIT_08s0007g03910.t01 Wine grape cytosol 69.14 64.14
KRH67846 Soybean cytosol 65.37 64.07
KRG96132 Soybean cytosol 64.99 63.86
KRH20027 Soybean cytosol 67.13 63.76
KRH32650 Soybean cytosol 66.88 63.52
Solyc10g085570.1.1 Tomato cytosol 63.22 63.3
Solyc10g083610.1.1 Tomato cytosol 65.37 62.61
Os09t0566550-01 Rice cytosol, plastid 54.66 57.79
OQU89015 Sorghum cytosol 55.16 57.33
Zm00001d005348_P001 Maize cytosol 54.79 56.57
GSMUA_Achr8P07600_001 Banana cytosol 59.32 56.27
HORVU4Hr1G001850.1 Barley plastid 54.53 56.02
TraesCS4D01G010200.1 Wheat plastid 54.28 55.97
TraesCS4A01G302000.1 Wheat plastid 54.28 55.76
TraesCS4B01G012100.1 Wheat plastid 54.16 55.7
Os02t0527600-01 Rice cytosol 54.28 55.19
GSMUA_Achr11P... Banana cytosol, plastid 53.65 54.9
Zm00001d016675_P001 Maize cytosol, plastid 54.79 54.38
GSMUA_Achr11P... Banana cytosol 54.53 54.06
KXG30326 Sorghum cytosol, plastid 54.53 53.86
CDX91191 Canola extracellular, plasma membrane 6.3 51.02
CDY57621 Canola cytosol 18.39 48.99
CDY57623 Canola cytosol 18.51 47.57
CDY65536 Canola cytosol 43.83 38.5
CDY61011 Canola cytosol 43.7 38.09
CDY22667 Canola cytosol 35.14 32.59
CDY14849 Canola cytosol 20.53 31.96
CDX70425 Canola plastid 35.01 31.66
CDX91190 Canola plastid 35.39 31.57
CDX78447 Canola cytosol, plastid 35.89 31.05
CDY67589 Canola cytosol, plastid 30.98 30.45
CDY26183 Canola cytosol 37.28 29.81
CDY19193 Canola cytosol 37.03 29.49
CDX96491 Canola cytosol 35.52 29.1
CDX72999 Canola cytosol 35.52 28.72
CDX88630 Canola cytosol 13.73 28.68
CDX94149 Canola cytosol 23.3 28.68
CDX74096 Canola cytosol 22.42 28.39
CDY24677 Canola cytosol 24.81 27.4
CDY05282 Canola cytosol 24.69 27.15
CDX98785 Canola cytosol 24.81 27.02
CDY49603 Canola nucleus 24.43 26.94
CDY00031 Canola cytosol 24.31 26.69
CDY34937 Canola cytosol 24.69 26.67
CDY24676 Canola cytosol 24.31 26.62
CDY34940 Canola cytosol 24.69 26.59
CDX97769 Canola cytosol 24.43 25.49
CDY58984 Canola cytosol 24.43 25.49
CDX84808 Canola cytosol 24.06 25.23
CDY23971 Canola cytosol 24.06 25.23
CDX67756 Canola cytosol 24.06 24.71
CDY49240 Canola cytosol 25.06 24.63
CDX91799 Canola cytosol, plasma membrane, plastid 15.74 24.61
CDY70084 Canola nucleus 18.01 24.57
CDX98314 Canola cytosol 24.06 24.55
CDX71938 Canola cytosol 24.94 24.54
CDY05283 Canola cytosol 23.55 24.51
CDY47984 Canola cytosol 17.38 23.63
CDY06328 Canola cytosol 32.87 21.73
CDY68740 Canola cytosol 17.76 16.26
CDY19453 Canola cytosol 17.25 16.14
CDY52846 Canola cytosol 18.77 14.87
CDX93034 Canola cytosol 18.01 14.52
CDX89796 Canola cytosol 18.26 14.37
CDY15117 Canola cytosol 17.76 14.34
CDY18251 Canola cytosol 18.14 14.29
CDX88548 Canola cytosol 19.65 14.25
CDX81758 Canola cytosol 19.14 13.87
CDX67987 Canola cytosol 20.15 13.83
CDY35076 Canola cytosol 18.77 13.64
CDY11861 Canola cytosol, plastid 17.51 13.44
CDX87374 Canola cytosol 19.52 13.39
CDY33347 Canola cytosol 18.64 13.23
CDX79328 Canola cytosol 20.4 13.14
CDX79590 Canola cytosol 19.02 12.83
CDY64646 Canola cytosol 18.26 12.72
CDX84624 Canola cytosol 18.89 12.51
CDY43642 Canola cytosol 18.39 12.43
CDX88629 Canola cytosol, plastid 2.77 6.81
CDX70426 Canola cytosol 0.76 1.93
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1Gene3D:1.10.510.10
MapMan:11.5.2.2MapMan:18.4.1.30Gene3D:3.30.200.20GO:A0A078CXX4EnsemblPlants:CDX80884ProteinID:CDX80884
ProteinID:CDX80884.1InterPro:CTR1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672
GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00134284001InterPro:IPR000719
InterPro:Kinase-like_dom_sfPFAM:PF07714PFAM:PF14381PRINTS:PR00109ScanProsite:PS00107ScanProsite:PS00108
PFscan:PS50011PANTHER:PTHR44329PANTHER:PTHR44329:SF1InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220
SUPFAM:SSF56112InterPro:Ser-Thr/Tyr_kinase_cat_domInterPro:Ser/Thr_kinase_ASUniParc:UPI0004EEE211SEG:seg:
Description
BnaC03g01380D
Coordinates
chrLK031823:-:629908..635090
Molecular Weight (calculated)
87274.7 Da
IEP (calculated)
5.565
GRAVY (calculated)
-0.315
Length
794 amino acids
Sequence
(BLAST)
001: MEMPGRRSNY TLLSQFPDDQ VSVSVTGAPP PHYDSFSSEN RSGGGSNGKT KGGFDWDPNR GAGNTYASPL GLQRQSSGSS FGESSLSGDY YVPAAAGSSE
101: IESAGFPLDV GFGGCGGGDL RIQMAAGEAG GSASGKSWAQ QTEESYQLQL ALALRLSSEA TCADDPNFLD PVPDESALRT SPSSAETVSH RFWVNGCLSY
201: YDKVPDGFYM IDGLDPYIWT LCIDLHESGR IPSIGSLRAV DSGVDSSLEA ILVDRRSDPA FKELHNRVHD ISCSCITTKE VVDQLAKLIC NRMGGPVIMG
301: EDELVPMWKE CINGLKECFK VVVPIGSLSV GLCRHRALLF KVLADIIDLP CRIAKGCKYC DRDDAASCLV RFGLDREYLV DLVGKPGHLW EPDSLLNGPS
401: TISISSPLRF PRPRPVEPAV DYRSLAKQYF TDSQSLNLVF DPASDDMGFS MFHRGGENDV MAENGGGSFP PSANMPPQNM MRASSQLQEA VPISAPPTNQ
501: PFPNRANREL GLDGDDMDIP WCDLNIKERI GAGSFGTVHR AEWHGSDVAV KILMEQDFHA ERVNEFLREV AIMKRLRHPN IVLFMGAVTQ PPNLSIVTEY
601: LSRGSLYRLL HKSGAREQLD ERRRLSMAYD VAKGMNYLHN RNPPIVHRDL KSPNLLVDKK YTVKVCDFGL SRLKASTFLS SKTAAGTPEW MAPEVLRDEQ
701: SNEKSDVYSF GVILWELATL QQPWGNLNPA QVVAAVGFKN KRLEIPRNLN PQVAAIIETC WTNEPWKRPS FATIMDLLRP LIKSAVPPPN RLDM
Best Arabidopsis Sequence Match ( AT5G03730.2 )
(BLAST)
001: MEMPGRRSNY TLLSQFSDDQ VSVSVTGAPP PHYDSLSSEN RSNHNSGNTG KAKAERGGFD WDPSGGGGGD HRLNNQPNRV GNNMYASSLG LQRQSSGSSF
101: GESSLSGDYY MPTLSAAANE IESVGFPQDD GFRLGFGGGG GDLRIQMAAD SAGGSSSGKS WAQQTEESYQ LQLALALRLS SEATCADDPN FLDPVPDESA
201: LRTSPSSAET VSHRFWVNGC LSYYDKVPDG FYMMNGLDPY IWTLCIDLHE SGRIPSIESL RAVDSGVDSS LEAIIVDRRS DPAFKELHNR VHDISCSCIT
301: TKEVVDQLAK LICNRMGGPV IMGEDELVPM WKECIDGLKE IFKVVVPIGS LSVGLCRHRA LLFKVLADII DLPCRIAKGC KYCNRDDAAS CLVRFGLDRE
401: YLVDLVGKPG HLWEPDSLLN GPSSISISSP LRFPRPKPVE PAVDFRLLAK QYFSDSQSLN LVFDPASDDM GFSMFHRQYD NPGGENDALA ENGGGSLPPS
501: ANMPPQNMMR ASNQIEAAPM NAPPISQPVP NRANRELGLD GDDMDIPWCD LNIKEKIGAG SFGTVHRAEW HGSDVAVKIL MEQDFHAERV NEFLREVAIM
601: KRLRHPNIVL FMGAVTQPPN LSIVTEYLSR GSLYRLLHKS GAREQLDERR RLSMAYDVAK GMNYLHNRNP PIVHRDLKSP NLLVDKKYTV KVCDFGLSRL
701: KASTFLSSKS AAGTPEWMAP EVLRDEPSNE KSDVYSFGVI LWELATLQQP WGNLNPAQVV AAVGFKCKRL EIPRNLNPQV AAIIEGCWTN EPWKRPSFAT
801: IMDLLRPLIK SAVPPPNRSD L
Arabidopsis Description
CTR1Serine/threonine-protein kinase CTR1 [Source:UniProtKB/Swiss-Prot;Acc:Q05609]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.