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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY70084 Canola nucleus 2.25 1.2
CDX70425 Canola plastid 3.22 1.14
CDY67589 Canola cytosol, plastid 2.89 1.11
CDY49603 Canola nucleus 2.57 1.11
CDY00031 Canola cytosol 2.57 1.11
CDY24676 Canola cytosol 2.57 1.1
CDX78447 Canola cytosol, plastid 3.22 1.09
CDY05283 Canola cytosol 2.57 1.05
TraesCS6D01G173100.2 Wheat mitochondrion 2.89 1.04
HORVU6Hr1G039740.6 Barley mitochondrion 2.89 1.04
AT5G11850.1 Thale cress mitochondrion 2.89 1.02
CDX91190 Canola plastid 2.89 1.01
GSMUA_Achr7P09040_001 Banana mitochondrion 2.89 1.01
CDY24677 Canola cytosol 2.25 0.97
CDY05282 Canola cytosol 2.25 0.97
Bra006122.1-P Field mustard cytosol, mitochondrion 3.22 0.96
CDY34937 Canola cytosol 2.25 0.95
CDY34940 Canola cytosol 2.25 0.95
Zm00001d053575_P005 Maize mitochondrion 2.57 0.94
CDY22667 Canola cytosol 2.57 0.93
TraesCS6B01G215100.2 Wheat mitochondrion 2.57 0.93
TraesCS6A01G186100.1 Wheat mitochondrion 2.57 0.92
OQU84648 Sorghum mitochondrion 2.57 0.91
CDY26183 Canola cytosol 2.89 0.91
CDY19193 Canola cytosol 2.89 0.9
Os02t0220700-01 Rice plasma membrane 2.25 0.88
CDX74096 Canola cytosol 1.61 0.8
GSMUA_Achr2P16720_001 Banana cytosol 1.93 0.77
VIT_04s0008g01310.t01 Wine grape cytosol, mitochondrion 2.25 0.77
CDX80884 Canola cytosol 1.93 0.76
CDY11267 Canola cytosol 1.93 0.75
CDX96491 Canola cytosol 2.25 0.72
CDY06328 Canola cytosol 2.57 0.67
KRH15528 Soybean mitochondrion, plastid 1.93 0.65
KRH05467 Soybean mitochondrion, plastid 1.93 0.64
CDX72999 Canola cytosol 1.93 0.61
CDY61011 Canola cytosol 1.61 0.55
CDY65536 Canola cytosol 1.29 0.44
CDY52846 Canola cytosol 1.29 0.4
CDX88548 Canola cytosol 1.29 0.37
CDX81758 Canola cytosol 1.29 0.36
CDY33347 Canola cytosol 1.29 0.36
CDY64646 Canola cytosol 1.29 0.35
CDX67987 Canola cytosol 1.29 0.35
CDX87374 Canola cytosol 1.29 0.35
CDY47984 Canola cytosol 0.64 0.34
CDY43642 Canola cytosol 1.29 0.34
CDX79328 Canola cytosol 1.29 0.32
CDY35076 Canola cytosol 0.96 0.27
CDX98785 Canola cytosol 0.64 0.27
CDX79590 Canola cytosol 0.96 0.25
CDX84624 Canola cytosol 0.96 0.25
CDY15117 Canola cytosol 0.64 0.2
CDX91799 Canola cytosol, plasma membrane, plastid 0.32 0.2
CDY10360 Canola cytosol 0.32 0.14
CDX70289 Canola cytosol 0.32 0.13
CDY68740 Canola cytosol 0.32 0.12
CDX93034 Canola cytosol 0.32 0.1
CDY18251 Canola cytosol 0.32 0.1
CDX89796 Canola cytosol 0.32 0.1
CDX84808 Canola cytosol 0.0 0.0
CDX67756 Canola cytosol 0.0 0.0
CDX88630 Canola cytosol 0.0 0.0
CDX88629 Canola cytosol, plastid 0.0 0.0
CDX91191 Canola extracellular, plasma membrane 0.0 0.0
CDX94149 Canola cytosol 0.0 0.0
Solyc08g065250.2.1 Tomato cytosol 0.0 0.0
CDX97769 Canola cytosol 0.0 0.0
CDX98314 Canola cytosol 0.0 0.0
CDY58984 Canola cytosol 0.0 0.0
CDY11861 Canola cytosol, plastid 0.0 0.0
CDY14849 Canola cytosol 0.0 0.0
CDX71938 Canola cytosol 0.0 0.0
CDY19453 Canola cytosol 0.0 0.0
CDY23971 Canola cytosol 0.0 0.0
CDY49240 Canola cytosol 0.0 0.0
CDY57621 Canola cytosol 0.0 0.0
CDY57623 Canola cytosol 0.0 0.0
Protein Annotations
MapMan:15.3.2.4MapMan:18.4.25.1.1Gene3D:3.40.50.1000GO:A0A078C0G1EnsemblPlants:CDX70426ProteinID:CDX70426
ProteinID:CDX70426.1InterPro:Dullard_phosphataseInterPro:FCP1_domGO:GO:0003674GO:GO:0003824GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016787GO:GO:0016791EnsemblPlantsGene:GSBRNA2T00140236001InterPro:HAD-like_sf
InterPro:HAD_sfInterPro:IPR004274InterPro:IPR023214PFAM:PF03031PFscan:PS50969PANTHER:PTHR12210
PANTHER:PTHR12210:SF105SMART:SM00577SUPFAM:SSF56784TIGRFAMs:TIGR02251UniParc:UPI0004EF34AASEG:seg
Description
BnaC03g05100D
Coordinates
chrLK031791:-:368027..370346
Molecular Weight (calculated)
35403.7 Da
IEP (calculated)
4.229
GRAVY (calculated)
-0.297
Length
311 amino acids
Sequence
(BLAST)
001: MEDDGSASSS SSRDLDAQNR YDRLLALNAS PVDSNCNLDS VSAIYLAMTS SKLECVDERG QGSLITSVCN MEDEEEDEEE LDEFDPYLFI KNLPHLSSVV
101: PTFRPVLLPK QTRSCPPISL VLDLDETLVH STLEPCDEVD FTFPVHFNEE EHTVYVRCRP HLQEFMERVS RLFEIIIFTA SQSIYAEQLL NVLDPKRKLF
201: RHRVYRDSCV FFDGNYLKDL SVLGRDLSRV IIVDNSPQAF GFQVENGVPI ESWFNDPSDK ELLHLLPFLE SLIGAEDVRP MIAKKFNLKE KIEAAVDAPE
301: YPAEAGDPFE R
Best Arabidopsis Sequence Match ( AT5G11860.3 )
(BLAST)
001: MEDDDSPSSR DLDAQNPYDR LLALDTSTVD PNCNLDSVSA IYLAMKSSKL ECVDERGQDS LITSVCMEDE EDEELDEFDP YLFIKNLPNL SSVVPTFRPV
101: LLPKQTRSCP PISLVLDLDE TLVHSTLEPC GEVDFTFPVN FNEEEHMVYV RCRPHLKEFM ERVSRLFEII IFTASQSIYA EQLLNVLDPK RKLFRHRVYR
201: DSCVFFDGNY LKDLSVLGRD LSRVIIVDNS PQAFGFQVEN GVPIESWFND PSDKELLHLL PFLESLIGVE DVRPMIAKKF NLREKIDAAV AAPEYPAEAG
301: DPFER
Arabidopsis Description
SSP5At5g11860 [Source:UniProtKB/TrEMBL;Acc:Q9LYI7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.