CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX68773
CDX70827
CDX75188
CDX88930
CDX90482
CDX90696
CDX92599
CDY02077	nucleus
CDY02615
CDY03835
CDY05028
CDY09637
CDY12903
CDY13902
CDY15020
CDY23001	nucleus
CDY26347
CDY47581
CDY53458	nucleus
CDY57375
CDY58103
CDY69679	nucleus

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G73660.1	CDY03835	AT1G61520.1	24320620
AT1G73660.1	CDY12903	AT1G61520.1	24320620
AT1G73660.1	CDY15020	AT1G61520.1	24320620
AT1G73660.1	CDY26347	AT1G61520.1	24320620
AT1G73660.1	CDY47581	AT1G61520.1	24320620
AT1G73660.1	CDY57375	AT1G61520.1	24320620
AT1G73660.1	CDY02077	AT3G50740.1	24320620
AT1G73660.1	CDY23001	AT3G50740.1	24320620
AT1G73660.1	CDY53458	AT3G50740.1	24320620
AT1G73660.1	CDY69679	AT3G50740.1	24320620
AT1G73660.1	CDY02077	AT3G50740.1	24320620
AT1G73660.1	CDY23001	AT3G50740.1	24320620
AT1G73660.1	CDY53458	AT3G50740.1	24320620
AT1G73660.1	CDY69679	AT3G50740.1	24320620
AT1G73660.1	CDX90696	AT4G08850.1	24320620
AT1G73660.1	CDY05028	AT4G08850.1	24320620
AT1G73660.1	CDX90482	AT4G17250.1	24320620
AT1G73660.1	CDY09637	AT4G17250.1	24320620
AT1G73660.1	CDX68773	AT4G31670.1	24320620
AT1G73660.1	CDX75188	AT4G31670.1	24320620
AT1G73660.1	CDX70827	AT5G18580.1	24320620
AT1G73660.1	CDX88930	AT5G18580.1	24320620
AT1G73660.1	CDX92599	AT5G18580.1	24320620
AT1G73660.1	CDY02615	AT5G18580.1	24320620
AT1G73660.1	CDY13902	AT5G18580.1	24320620
AT1G73660.1	CDY58103	AT5G18580.1	24320620

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96491	Canola	cytosol	93.89	95.15
Bra015976.1-P	Field mustard	cytosol	93.18	95.11
AT1G73660.1	Thale cress	cytosol	83.6	79.71
CDY26183	Canola	cytosol	72.61	71.8
CDY19193	Canola	cytosol	72.4	71.31
Solyc06g068980.2.1	Tomato	nucleus	62.42	61.98
KRH60519	Soybean	cytosol, plastid	63.44	61.32
VIT_17s0000g02540.t01	Wine grape	cytosol	64.15	60.99
KRH41805	Soybean	cytosol, plastid	62.32	60.18
Solyc03g119140.2.1	Tomato	extracellular	62.02	59.07
KRH48620	Soybean	cytosol, plastid	61.71	59.06
KRH39096	Soybean	cytosol, plastid	61.2	58.81
PGSC0003DMT400074057	Potato	cytosol, plastid	54.18	58.65
GSMUA_Achr10P...	Banana	cytosol	52.55	56.46
CDX91191	Canola	extracellular, plasma membrane	5.5	55.1
Os06t0232100-02	Rice	plasma membrane	32.69	53.68
CDY57621	Canola	cytosol	15.89	52.35
CDY57623	Canola	cytosol	15.89	50.49
HORVU7Hr1G038650.1	Barley	cytosol, plastid	49.49	45.76
TraesCS7B01G095300.2	Wheat	cytosol, plastid	49.29	45.57
TraesCS7D01G191400.1	Wheat	cytosol	49.19	45.39
TraesCS7A01G190300.1	Wheat	cytosol	48.98	45.21
KXG19659	Sorghum	cytosol, plastid	49.59	44.97
Os02t0743500-02	Rice	plasma membrane	50.71	44.82
Zm00001d044814_P002	Maize	cytosol, plastid	49.69	44.48
HORVU6Hr1G076070.3	Barley	cytosol	49.29	43.72
TraesCS6A01G308500.1	Wheat	cytosol	49.39	43.62
TraesCS6B01G337200.1	Wheat	cytosol	49.39	43.62
TraesCS6D01G287700.1	Wheat	cytosol	49.19	43.55
CDX70425	Canola	plastid	38.9	43.51
EES07274	Sorghum	cytosol	49.39	43.15
CDX91190	Canola	plastid	38.59	42.58
CDY67589	Canola	cytosol, plastid	34.83	42.33
CDX78447	Canola	cytosol, plastid	39.21	41.94
CDY22667	Canola	cytosol	36.35	41.71
CDY10360	Canola	cytosol	28.11	37.65
CDX70289	Canola	cytosol	28.21	37.08
CDX80884	Canola	cytosol	28.72	35.52
CDY11267	Canola	cytosol	28.72	35.43
Zm00001d018025_P001	Maize	cytosol	35.03	34.96
CDY14849	Canola	cytosol	16.8	32.35
CDX74096	Canola	cytosol	20.26	31.74
CDY00031	Canola	cytosol	22.61	30.71
CDY49603	Canola	nucleus	22.4	30.56
CDY65536	Canola	cytosol	28.0	30.42
CDY34937	Canola	cytosol	22.61	30.2
CDY05282	Canola	cytosol	22.2	30.19
CDY61011	Canola	cytosol	28.0	30.19
CDY34940	Canola	cytosol	22.61	30.12
CDY24677	Canola	cytosol	22.0	30.04
CDY24676	Canola	cytosol	22.1	29.93
CDX94149	Canola	cytosol	19.55	29.77
CDX88630	Canola	cytosol	11.41	29.47
CDY06328	Canola	cytosol	35.64	29.14
CDY05283	Canola	cytosol	22.2	28.57
CDY70084	Canola	nucleus	16.8	28.35
CDX97769	Canola	cytosol	21.59	27.86
CDY58984	Canola	cytosol	21.59	27.86
CDX84808	Canola	cytosol	21.18	27.48
CDY23971	Canola	cytosol	21.18	27.48
CDX98785	Canola	cytosol	20.37	27.43
CDX91799	Canola	cytosol, plasma membrane, plastid	13.95	26.97
CDX67756	Canola	cytosol	20.57	26.13
CDX98314	Canola	cytosol	20.57	25.96
CDX71938	Canola	cytosol	21.18	25.77
CDY49240	Canola	cytosol	21.08	25.62
CDY47984	Canola	cytosol	13.95	23.46
CDY19453	Canola	cytosol	14.26	16.49
CDY68740	Canola	cytosol	14.36	16.26
CDY52846	Canola	cytosol	15.48	15.17
CDY15117	Canola	cytosol	14.26	14.24
CDX81758	Canola	cytosol	15.89	14.23
CDY18251	Canola	cytosol	14.46	14.09
CDX89796	Canola	cytosol	14.46	14.07
CDY11861	Canola	cytosol, plastid	14.77	14.02
CDX93034	Canola	cytosol	14.05	14.01
CDY35076	Canola	cytosol	15.48	13.92
CDX67987	Canola	cytosol	15.99	13.57
CDY33347	Canola	cytosol	15.38	13.49
CDX88548	Canola	cytosol	14.97	13.42
CDX79590	Canola	cytosol	15.78	13.17
CDY64646	Canola	cytosol	15.27	13.16
CDX84624	Canola	cytosol	15.89	13.01
CDX87374	Canola	cytosol	15.07	12.78
CDX79328	Canola	cytosol	15.78	12.57
CDY43642	Canola	cytosol	14.97	12.51
CDX88629	Canola	cytosol, plastid	2.65	8.05
CDX70426	Canola	cytosol	0.61	1.93

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.30	Gene3D:3.30.200.20	GO:A0A078C9X9	EnsemblPlants:CDX72999	ProteinID:CDX72999
ProteinID:CDX72999.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00103437001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
PFAM:PF07714	PFAM:PF14381	PRINTS:PR00109	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR44741	PANTHER:PTHR44741:SF2	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EE8461	SEG:seg	:	:

Description

BnaC06g34470D

Coordinates

chrLK031797:-:1586549..1591688

Molecular Weight (calculated)

107175.0 Da

IEP (calculated)

5.178

GRAVY (calculated)

-0.407

Length

982 amino acids

Sequence
(BLAST)

001: MPDSVRSMKM NMKSFLKKLH ITPNQPDEAA DIPTNNNNKP SDASSSPHHQ SPEVKPFSGL SNWLSSVGHR KSPSPPNSLN ATNDEHQQDS KEDPEVEEEY
101: QIQLALELSA REDPEAAQIE AMKQFSLGSC APDNSPAELV AYRYWNYNCL GYDDKILDGF YDLYGVLNAS SAEKIPSLLD LQGTPVSDGV TWEAVLVNRS
201: GDYNLLRVEQ MGIDIAANTE SVSSSSFVNS ELVRKLAVLV GDYMGGPVVD PDSMLRAWRS LSYSLKATLG SMVLPLGSLT IGLARHRALL FKVLCDSVGV
301: PCRIVKGQQY TGSEDVAMNY IKTDDGREYI VDLMGDPGTL IPADAAGLQV DYDEPVCSTS PGDNDSFHDA SSTNGIESSF QQNIGFPPWE HSSSTKSSKE
401: DVANVEKAPP AQNLSSRPIH SFTHMRSPSW TEGVSSPAAR RMKVKDVSQY MIDAAKENPR LAQKLHDVLL ESGVVAPPNL FSEVYPQQLD ATVEIKNLTE
501: AKKEKGNDLG PVRFLPPLPR LHSKADTQDQ HDHGKAVSQS ESSHSEASST EYARTVPAAV AAAAVVASSM VAAAAKNANI ESSTLELPAA AAATATAAAV
601: VATAAAVSKH LELGSNSDEP QGSGDSPHGP NSGGDRVSDR STGDESSKSD GTLDDVSDCE ILWEEITLGE RIGLGSYGEV YRGDWHGTEV AAKKFLDQDL
701: TGEALEEFRS EVQIMKKLRH PNIVLFMGAV TRPPNLSIIT EFLPRGSLYR LIHRPNNQLD ERRRLRMALD AARGMNYLHS CSPMIVHRDL KSPNLLVDKN
801: WVVKVCDFGL SRMKNSTYLS SKSTAGTAEW MAPEVLRNEP ADEKCDVYSY GVILWELFTL QQPWGRMNAM QVVGAVGFQH RRLDIPDFVD PAIAELISKC
901: WQTDSKLRPS FAEIMVTLKK LQRPATGSNI PRPVPSASSL TAEQEQKDSS VGFLTQLVGR AIKIKFMGEG HHSRVQGTEC MF

Best Arabidopsis Sequence Match ( AT1G73660.1 )
(BLAST)

0001: MKVKEETLKN LGDGVVLRPV DHCSSIWSMK MNMKNFLKKL HISPNQSDEA EGSISTTKSN HHKSIDVSSS SSPRSHHSNS PEIKPFSGLS NWLSSVGHRK
0101: IPSPPNSFNA KNRAATVDDT VVVNGSEHVD LGSKDPAVEE ENQIQLALEL SAREDPEATQ IEAIKQFSLG SCAPENSPAE LIAYRYWNYN CLGYDDKILD
0201: GFYDLYGVLN ASSAERIPPL LDLQGTPVSD GVTWEAVLVN RSGDSNLLRL EQMALDIAAK SRSVSSSGFV NSELVRKLAI LVGDYMGGPV VHPESMLRAW
0301: RSLSYSLKAT LGSMVLPLGS LTIGLARHRA LLFKVLCDSV GVPCRIVKGQ QYTGSEDVAM NFIKADDGRE YIVDLMGDPG TLIPADAAGL QIDYDESAYS
0401: ASPGDNDSIH VASSSNGIES SYEENTEFRT GEHRSSTKSS GERNQSGGGG DLIVHPNISR EDVKNQKKVE KAPFQNLSSR PIHSFTHMRS PSWTEGVSSP
0501: AAQRMKVKDV SQYMIDAAKE NPRLAQKLHD VLLESGVVAP PNLFSEVYPQ QLEATVESKN STEAKKERGK DLETTQEGRH QNGFGPVRFL PPLPRVQSKT
0601: NAHDQRDNGK VVSQSDSSHS EASSTEYART VPAAVAAAAV VASSMVAAAA AKSANSDSSP IELPAAAAAT ATAAAVVATA AAVSRQLELG SNSDGDDGSG
0701: GHEPQGSGDS NHGPNSGGER ISDKSIGNES SKSDCDDVSD CEILWEEITV GERIGLGSYG EVYRGDWHGT EVAVKKFLDQ DLTGEALEEF RSEVRIMKKL
0801: RHPNIVLFMG AVTRPPNLSI VTEFLPRGSL YRLIHRPNNQ LDERRRLRMA LDAARGMNYL HSCNPMIVHR DLKSPNLLVD KNWVVKVCDF GLSRMKHSTY
0901: LSSKSTAGTA EWMAPEVLRN EPADEKCDVY SYGVILWELF TLQQPWGKMN PMQVVGAVGF QHRRLDIPDF VDPAIADLIS KCWQTDSKLR PSFAEIMASL
1001: KRLQKPVTGS NIPRPVPSSS SLPTEHEQKD

Arabidopsis Description

SIS8Probable serine/threonine-protein kinase SIS8 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9U5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.