Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 6
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra011290.1-P | Field mustard | vacuole | 97.38 | 97.22 |
| CDX68773 | Canola | nucleus, plasma membrane | 94.6 | 94.14 |
| AT4G31670.1 | Thale cress | endoplasmic reticulum, golgi | 80.52 | 77.97 |
| CDY45587 | Canola | endoplasmic reticulum, vacuole | 65.79 | 63.51 |
| CDY20330 | Canola | vacuole | 66.61 | 63.3 |
| CDY34761 | Canola | endoplasmic reticulum, vacuole | 65.96 | 62.58 |
| CDX76801 | Canola | endoplasmic reticulum, golgi, vacuole | 65.63 | 61.6 |
| GSMUA_Achr7P05090_001 | Banana | vacuole | 43.7 | 57.17 |
| PGSC0003DMT400076065 | Potato | endoplasmic reticulum | 31.91 | 56.03 |
| KRH61621 | Soybean | golgi | 52.86 | 43.53 |
| KRH15706 | Soybean | golgi, plasma membrane, vacuole | 51.88 | 43.48 |
| KRH52289 | Soybean | golgi | 51.72 | 43.05 |
| KRH05330 | Soybean | golgi, plasma membrane | 51.06 | 42.33 |
| Solyc12g096430.1.1 | Tomato | nucleus, plastid | 40.92 | 40.19 |
| Solyc08g069050.2.1 | Tomato | extracellular | 48.94 | 38.48 |
| VIT_04s0069g00760.t01 | Wine grape | nucleus | 48.45 | 34.26 |
| Zm00001d036707_P006 | Maize | plasma membrane | 45.34 | 28.91 |
| KXG20513 | Sorghum | golgi, plasma membrane | 45.34 | 28.38 |
| Os06t0654000-01 | Rice | cytosol, nucleus | 43.54 | 28.18 |
| CDY08792 | Canola | vacuole | 34.04 | 27.77 |
| CDY14564 | Canola | golgi | 34.21 | 27.43 |
| CDY13770 | Canola | nucleus | 15.71 | 26.97 |
| CDX76934 | Canola | nucleus | 15.55 | 26.84 |
| CDY68864 | Canola | nucleus | 15.71 | 25.81 |
| CDX96790 | Canola | nucleus | 35.19 | 25.75 |
| CDX69375 | Canola | nucleus | 15.55 | 25.61 |
| CDX83925 | Canola | nucleus | 35.35 | 25.5 |
| CDX72275 | Canola | cytosol | 15.38 | 25.41 |
| TraesCS7A01G498400.1 | Wheat | extracellular, golgi, plasma membrane | 44.03 | 25.38 |
| TraesCS7D01G485600.1 | Wheat | golgi, plasma membrane | 44.19 | 25.35 |
| CDY65125 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 36.33 | 25.31 |
| TraesCS7B01G405400.1 | Wheat | golgi, plasma membrane | 44.35 | 25.21 |
| GSMUA_Achr1P10260_001 | Banana | endoplasmic reticulum, plasma membrane | 46.64 | 25.2 |
| HORVU7Hr1G111430.5 | Barley | cytosol, nucleus | 43.21 | 25.12 |
| CDY48465 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 36.01 | 25.11 |
| CDY63898 | Canola | nucleus | 15.55 | 23.87 |
| CDY11021 | Canola | golgi | 35.52 | 21.51 |
| CDY03441 | Canola | golgi | 35.35 | 21.32 |
| CDX92643 | Canola | golgi | 35.19 | 21.22 |
| CDY34291 | Canola | golgi | 35.19 | 21.08 |
| CDY68683 | Canola | endoplasmic reticulum, vacuole | 15.88 | 19.92 |
| CDX87681 | Canola | nucleus | 19.8 | 19.21 |
| CDX76553 | Canola | cytosol | 19.8 | 18.85 |
| CDX75770 | Canola | mitochondrion, nucleus | 20.46 | 18.83 |
| CDY37145 | Canola | cytosol | 19.97 | 18.32 |
| CDX98449 | Canola | mitochondrion | 20.79 | 18.04 |
| CDX97571 | Canola | mitochondrion | 20.79 | 17.94 |
| CDY23262 | Canola | nucleus | 16.04 | 17.92 |
| CDY58499 | Canola | endoplasmic reticulum | 21.11 | 17.89 |
| CDX85744 | Canola | cytosol | 16.86 | 17.7 |
| CDX77686 | Canola | endoplasmic reticulum | 21.6 | 17.48 |
| CDY50263 | Canola | cytosol | 7.69 | 17.34 |
| CDY40119 | Canola | nucleus | 16.53 | 17.29 |
| CDY36465 | Canola | cytosol | 15.88 | 16.52 |
| CDY28224 | Canola | endoplasmic reticulum, vacuole | 15.88 | 16.44 |
| CDX68701 | Canola | endoplasmic reticulum, extracellular | 16.04 | 16.42 |
| CDY11838 | Canola | nucleus, plastid | 21.44 | 16.0 |
| CDY32735 | Canola | nucleus | 20.95 | 15.98 |
| CDY55010 | Canola | nucleus | 22.09 | 15.88 |
| CDY02782 | Canola | nucleus | 20.79 | 15.86 |
| CDX88651 | Canola | nucleus, plastid | 21.28 | 15.78 |
| CDY57464 | Canola | nucleus | 21.77 | 15.68 |
| CDX87682 | Canola | cytosol | 0.16 | 3.03 |
Protein Annotations
| MapMan:19.2.3.1.1.7 | Gene3D:3.30.60.180 | Gene3D:3.90.70.10 | GO:A0A078CJE3 | EnsemblPlants:CDX75188 | ProteinID:CDX75188 |
| ProteinID:CDX75188.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006464 | GO:GO:0006511 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016579 | GO:GO:0016787 | GO:GO:0019538 |
| GO:GO:0036459 | EnsemblPlantsGene:GSBRNA2T00121033001 | InterPro:IPR002893 | InterPro:IPR028889 | PFAM:PF00443 | PFAM:PF01753 |
| ScanProsite:PS00972 | PFscan:PS50235 | PFscan:PS50865 | PANTHER:PTHR45499 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C19_UCH |
| SUPFAM:SSF144232 | SUPFAM:SSF54001 | TMHMM:TMhelix | UniParc:UPI0004EE1183 | InterPro:USP_CS | InterPro:USP_dom |
| InterPro:Znf_MYND | SEG:seg | : | : | : | : |
Description
BnaA01g05140D
Coordinates
chrLK031804:-:7948..10728
Molecular Weight (calculated)
68723.7 Da
IEP (calculated)
4.751
GRAVY (calculated)
-0.383
Length
611 amino acids
Sequence
(BLAST)
(BLAST)
001: MHEVGFPLDL SVLTRLIPTL FFLAVGVFYF LKNTAAKYFD IGGAAAGGFD RELVAEDCTT KCSRCNSVRY CSEECQTSDW SSGHQRRCRE IGITTLTPSA
101: RNSLRFRASR FGDCPERDQN KINFKPREVL FPYEEFVRYF NWDNTDLAPC GLMNCGNSCF ANVILQCLSW TRPLVAYLLE RGHRSECMRD DWCFFCAFQT
201: HVERASQSRY PFSPVNIISR LTNIGGTLGY GRQEDAHEFM RYAIDTMQSV CLDEFGGEKM VPPRCQETTL VQYIFGGLLQ SQVQCTVCNN VSEQYENMMD
301: LTVEIHGDAV SLEECLDQFT AREWLQGDNM YKCDRCSDYV KACKRLTIRR PPNVLTIALK RFKGGRYGKL NKRISFPETL DLRPYMSQGG EGSDVYTLYA
401: VIVHLDMLNA SFFGHYICYI KDFSGNWYRI DDSEIESVEL EEVLSQRAYM LLYSRIQARS PLPCESIGSE AQEKETDTLA TKPCQKELVE SSMVEAIDTR
501: SSTNHATSED LECEQESSSS SSSSISSPSS PSVVTSESCT VDGLDSDSNP WIDDDSAIDH QESVVTNGNI DGEVKNHAVG SCSDVTASVP SSCSKPRHPV
601: RDTDTKMIGA Q
101: RNSLRFRASR FGDCPERDQN KINFKPREVL FPYEEFVRYF NWDNTDLAPC GLMNCGNSCF ANVILQCLSW TRPLVAYLLE RGHRSECMRD DWCFFCAFQT
201: HVERASQSRY PFSPVNIISR LTNIGGTLGY GRQEDAHEFM RYAIDTMQSV CLDEFGGEKM VPPRCQETTL VQYIFGGLLQ SQVQCTVCNN VSEQYENMMD
301: LTVEIHGDAV SLEECLDQFT AREWLQGDNM YKCDRCSDYV KACKRLTIRR PPNVLTIALK RFKGGRYGKL NKRISFPETL DLRPYMSQGG EGSDVYTLYA
401: VIVHLDMLNA SFFGHYICYI KDFSGNWYRI DDSEIESVEL EEVLSQRAYM LLYSRIQARS PLPCESIGSE AQEKETDTLA TKPCQKELVE SSMVEAIDTR
501: SSTNHATSED LECEQESSSS SSSSISSPSS PSVVTSESCT VDGLDSDSNP WIDDDSAIDH QESVVTNGNI DGEVKNHAVG SCSDVTASVP SSCSKPRHPV
601: RDTDTKMIGA Q
001: MHEVGFPLDL SVFTRLIATL FFLAVGVFYF LKNTAAKYFD IGAAAAGGFD RDFMAVDAED CSVCGNFSTK KCSRCKSVRY CSAECQRSDW SSGHQRNCRD
101: YGITTLTPSA KNGLRFRASP FGDSSASSIA LISERGQNKS SLKPREVLFP YEEFVEYFNW DNPELAPCGL MNCGNSCFAN VILQCLSWTR PLVAYLLEKG
201: HKRECMRNDW CFLCEFQTHV ERASQSRFPF SPMNIISRLT NIGGTLGYGR QEDAHEFMRY AIDMMQSVCL DEFGGEKIVP PRSQETTLIQ YIFGGLLQSQ
301: VQCTVCNHVS DQYENMMDLI VEMHGDAGSL EECLDQFTAE EWLHGDNMYK CDRCSDYVKA CKRLTIRRAP NILTIALKRY QGGRYGKLNK RISFPETLDL
401: NPYMSEGGDG SDVYKLYAVI VHLDMLNASF FGHYICYIKD FCGNWYRIDD SEIESVELED VLSQRAYMLL YSRIQARSSS SCLRSEVKDE KKTDTLDTES
501: CVKELVESSM VGAIESRSST HATIEDPVCE QSPSPSPSPS PSPSPSPSPS VLASECCSEV ERIDTLDSES NSSIDDSATD HQEDVANGNK DPEVKYQAAD
601: SWSDPTTSTP LVCTKSKPPV RDMDTKMIDA Q
101: YGITTLTPSA KNGLRFRASP FGDSSASSIA LISERGQNKS SLKPREVLFP YEEFVEYFNW DNPELAPCGL MNCGNSCFAN VILQCLSWTR PLVAYLLEKG
201: HKRECMRNDW CFLCEFQTHV ERASQSRFPF SPMNIISRLT NIGGTLGYGR QEDAHEFMRY AIDMMQSVCL DEFGGEKIVP PRSQETTLIQ YIFGGLLQSQ
301: VQCTVCNHVS DQYENMMDLI VEMHGDAGSL EECLDQFTAE EWLHGDNMYK CDRCSDYVKA CKRLTIRRAP NILTIALKRY QGGRYGKLNK RISFPETLDL
401: NPYMSEGGDG SDVYKLYAVI VHLDMLNASF FGHYICYIKD FCGNWYRIDD SEIESVELED VLSQRAYMLL YSRIQARSSS SCLRSEVKDE KKTDTLDTES
501: CVKELVESSM VGAIESRSST HATIEDPVCE QSPSPSPSPS PSPSPSPSPS VLASECCSEV ERIDTLDSES NSSIDDSATD HQEDVANGNK DPEVKYQAAD
601: SWSDPTTSTP LVCTKSKPPV RDMDTKMIDA Q
Arabidopsis Description
UBP18Ubiquitin carboxyl-terminal hydrolase 18 [Source:UniProtKB/Swiss-Prot;Acc:Q67XW5]
SUBAcon: [endoplasmic reticulum,golgi]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.