Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 4
- endoplasmic reticulum 6
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra025000.1-P | Field mustard | endoplasmic reticulum | 95.98 | 94.92 |
| CDX77686 | Canola | endoplasmic reticulum | 90.15 | 86.09 |
| CDY37145 | Canola | cytosol | 62.69 | 67.87 |
| CDX87681 | Canola | nucleus | 58.25 | 66.67 |
| CDX87682 | Canola | cytosol | 2.77 | 60.61 |
| AT5G46740.1 | Thale cress | nucleus, plastid | 54.09 | 53.28 |
| CDX76553 | Canola | cytosol | 37.17 | 41.74 |
| GSMUA_Achr4P19070_001 | Banana | cytosol, golgi, mitochondrion, plastid | 20.25 | 41.48 |
| Solyc09g015580.1.1 | Tomato | vacuole | 17.06 | 39.55 |
| Solyc09g015600.1.1 | Tomato | extracellular | 16.92 | 39.1 |
| PGSC0003DMT400093121 | Potato | cytosol | 15.26 | 38.06 |
| Solyc08g048410.1.1 | Tomato | cytosol | 8.32 | 35.93 |
| VIT_02s0012g01340.t01 | Wine grape | nucleus | 25.66 | 35.24 |
| Solyc09g017980.1.1 | Tomato | extracellular | 9.99 | 34.78 |
| Solyc08g048310.1.1 | Tomato | extracellular, vacuole | 10.12 | 33.8 |
| Solyc08g005080.1.1 | Tomato | cytosol | 22.05 | 32.78 |
| Solyc09g017990.1.1 | Tomato | plastid | 21.36 | 32.29 |
| Solyc08g021830.1.1 | Tomato | cytosol | 15.53 | 32.0 |
| Solyc09g015610.1.1 | Tomato | cytosol | 5.55 | 31.75 |
| Solyc08g021790.1.1 | Tomato | extracellular, vacuole | 10.26 | 31.62 |
| Solyc02g005600.1.1 | Tomato | vacuole | 21.08 | 31.15 |
| Solyc10g047480.1.1 | Tomato | nucleus | 20.53 | 30.83 |
| PGSC0003DMT400045160 | Potato | nucleus | 29.68 | 30.06 |
| PGSC0003DMT400046008 | Potato | cytosol | 22.05 | 29.94 |
| Solyc08g076910.2.1 | Tomato | nucleus | 29.4 | 29.69 |
| PGSC0003DMT400089939 | Potato | cytosol | 15.4 | 29.68 |
| CDX76934 | Canola | nucleus | 14.29 | 29.1 |
| PGSC0003DMT400093591 | Potato | cytosol | 10.12 | 29.08 |
| GSMUA_Achr5P13990_001 | Banana | endoplasmic reticulum | 23.44 | 28.84 |
| Solyc08g023360.1.1 | Tomato | extracellular | 10.12 | 28.74 |
| KRH39541 | Soybean | nucleus | 29.26 | 28.55 |
| KRH74417 | Soybean | nucleus | 28.57 | 28.49 |
| Zm00001d051513_P001 | Maize | nucleus | 23.3 | 28.43 |
| CDY13770 | Canola | nucleus | 14.01 | 28.37 |
| CDX69375 | Canola | nucleus | 14.29 | 27.76 |
| CDY68864 | Canola | nucleus | 14.29 | 27.69 |
| CDY63898 | Canola | nucleus | 14.29 | 25.88 |
| PGSC0003DMT400088084 | Potato | cytosol | 11.37 | 24.4 |
| CDX72275 | Canola | cytosol | 12.48 | 24.32 |
| Zm00001d017686_P002 | Maize | mitochondrion, nucleus | 24.41 | 23.78 |
| TraesCS6A01G264800.1 | Wheat | nucleus | 23.86 | 23.43 |
| OQU85579 | Sorghum | nucleus | 24.13 | 23.36 |
| HORVU6Hr1G067180.4 | Barley | nucleus | 23.86 | 23.27 |
| TraesCS6D01G250100.1 | Wheat | nucleus | 23.86 | 23.27 |
| TraesCS6B01G291800.1 | Wheat | nucleus | 23.72 | 23.14 |
| CDY68683 | Canola | endoplasmic reticulum, vacuole | 14.84 | 21.97 |
| CDX75188 | Canola | vacuole | 17.89 | 21.11 |
| CDX68773 | Canola | nucleus, plasma membrane | 17.75 | 20.85 |
| CDY45587 | Canola | endoplasmic reticulum, vacuole | 16.5 | 18.8 |
| CDY20330 | Canola | vacuole | 16.64 | 18.66 |
| CDY34761 | Canola | endoplasmic reticulum, vacuole | 15.95 | 17.86 |
| CDX76801 | Canola | endoplasmic reticulum, golgi, vacuole | 16.09 | 17.82 |
| CDY02782 | Canola | nucleus | 19.69 | 17.73 |
| CDY32735 | Canola | nucleus | 19.56 | 17.6 |
| CDY11838 | Canola | nucleus, plastid | 19.97 | 17.58 |
| CDX88651 | Canola | nucleus, plastid | 19.97 | 17.48 |
| CDX85744 | Canola | cytosol | 14.01 | 17.35 |
| CDY23262 | Canola | nucleus | 13.04 | 17.18 |
| CDY55010 | Canola | nucleus | 20.25 | 17.18 |
| CDY50263 | Canola | cytosol | 6.38 | 16.97 |
| CDY57464 | Canola | nucleus | 19.83 | 16.86 |
| CDY28224 | Canola | endoplasmic reticulum, vacuole | 13.73 | 16.78 |
| CDY40119 | Canola | nucleus | 13.31 | 16.44 |
| CDY36465 | Canola | cytosol | 13.31 | 16.35 |
| CDX75770 | Canola | mitochondrion, nucleus | 14.98 | 16.27 |
| CDX68701 | Canola | endoplasmic reticulum, extracellular | 13.45 | 16.25 |
| CDX97571 | Canola | mitochondrion | 15.81 | 16.1 |
| CDX98449 | Canola | mitochondrion | 15.53 | 15.91 |
| CDY08792 | Canola | vacuole | 15.26 | 14.69 |
| CDY14564 | Canola | golgi | 15.4 | 14.57 |
| CDX96790 | Canola | nucleus | 15.4 | 13.29 |
| CDX83925 | Canola | nucleus | 15.4 | 13.11 |
| CDY48465 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 15.67 | 12.9 |
| CDY65125 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 15.67 | 12.88 |
| CDY03441 | Canola | golgi | 17.89 | 12.73 |
| CDY11021 | Canola | golgi | 17.61 | 12.59 |
| CDY34291 | Canola | golgi | 17.75 | 12.55 |
| CDX92643 | Canola | golgi | 17.2 | 12.24 |
Protein Annotations
| Gene3D:3.90.70.10 | MapMan:35.1 | GO:A0A078J5Y3 | UniProt:A0A078J5Y3 | EnsemblPlants:CDY58499 | ProteinID:CDY58499 |
| ProteinID:CDY58499.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0006464 | GO:GO:0006511 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016579 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0036459 | EnsemblPlantsGene:GSBRNA2T00023681001 | InterPro:IPR028889 |
| PFAM:PF00443 | ScanProsite:PS00972 | ScanProsite:PS00973 | PFscan:PS50235 | PANTHER:PTHR44033 | PANTHER:PTHR44033:SF1 |
| InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C19_UCH | SUPFAM:SSF54001 | TMHMM:TMhelix | UniParc:UPI0004EEA35E | InterPro:USP_CS |
| InterPro:USP_dom | SEG:seg | : | : | : | : |
Description
BnaA06g40310DBnaA06g40310D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J5Y3]
Coordinates
chrLK033674:-:11933..15352
Molecular Weight (calculated)
82296.5 Da
IEP (calculated)
6.428
GRAVY (calculated)
-0.589
Length
721 amino acids
Sequence
(BLAST)
(BLAST)
001: MNFPLNSKPF LIDSPCLLLA AIFLLSFLYL TKPRTFFLRI FDLGFLLMAE PSPIIETLDE DESPPQIQTL DESPSDDSSN EIGSRNRRPR RNMRYFDYSS
101: DDDDDLSNGI FRNRSAVYGD LYNRRPRRYM QSFDYSSDDD VEMELPKPID IFSCSSPENK PTGVGAGLNN SGNTCFIASV LQCLTHTVPL LHSLRSYKYH
201: CPCNCGNESF CVLRTLRYHI EHALRSSGCD IMIDRFRDNL NYFSSDFQIN HQEDAHEFLQ SFLDKLEKCC LDRSRRDNPP SVSSQDVNIV DNIFGGRLVS
301: KLRCCNCNSV SETFETSPGW SLEIEDVEDL SSALESFTCV ENLEDQFTCD DCKEKVSKEK QLKFDKLPLV ATFHLKRFKN NGVYMQKINK DVKFPLELDL
401: LPYMSSNENP EVSTKYHLYA MVEHLGSGTY FGHYSAYVRS APETWHHFDD EKVRRISEEC VLSKSAYMLF YAREGTPCFA SAFEELKTLF DATPMNFSPK
501: SCVSDLSYQT VSDSSNACNG SVGVSIPCGN SSDYHCDEAQ DEVFHSAESN SGDEYFAFKS PKADDSEKPF AATFHQEERP LYSDGNRATT DDAYVPVVKI
601: QEQVSSPKRE AAERAIVGEE TFLTKRKMRK RNPFSKRQGK TFQIRHEHLQ NKKKREETCI TNPFRSIVAA ASDPKEKKHA VSYLRSRPCS SRSRLLVAAL
701: GVNVKKKKVS NIRRSSLHRN L
101: DDDDDLSNGI FRNRSAVYGD LYNRRPRRYM QSFDYSSDDD VEMELPKPID IFSCSSPENK PTGVGAGLNN SGNTCFIASV LQCLTHTVPL LHSLRSYKYH
201: CPCNCGNESF CVLRTLRYHI EHALRSSGCD IMIDRFRDNL NYFSSDFQIN HQEDAHEFLQ SFLDKLEKCC LDRSRRDNPP SVSSQDVNIV DNIFGGRLVS
301: KLRCCNCNSV SETFETSPGW SLEIEDVEDL SSALESFTCV ENLEDQFTCD DCKEKVSKEK QLKFDKLPLV ATFHLKRFKN NGVYMQKINK DVKFPLELDL
401: LPYMSSNENP EVSTKYHLYA MVEHLGSGTY FGHYSAYVRS APETWHHFDD EKVRRISEEC VLSKSAYMLF YAREGTPCFA SAFEELKTLF DATPMNFSPK
501: SCVSDLSYQT VSDSSNACNG SVGVSIPCGN SSDYHCDEAQ DEVFHSAESN SGDEYFAFKS PKADDSEKPF AATFHQEERP LYSDGNRATT DDAYVPVVKI
601: QEQVSSPKRE AAERAIVGEE TFLTKRKMRK RNPFSKRQGK TFQIRHEHLQ NKKKREETCI TNPFRSIVAA ASDPKEKKHA VSYLRSRPCS SRSRLLVAAL
701: GVNVKKKKVS NIRRSSLHRN L
001: MAEFSDPPPS NLSSSHKLTK PNQTLDESSP TAPIRDLVTN SLSLSSPIRQ IQALSPAKPD GSSSSPPDKT LNFNPEENRD VNPDESSSSP SDKTLIAPPA
101: QISPVSNNNH LRITNTSDSY LYRPPRRYIE YESDDDELNK MEPTKPLQLS WWYPRIEPTG VGAGLYNSGN TCFIASVLQC FTHTVPLIDS LRSFMYGNPC
201: NCGNEKFCVM QALRDHIELA LRSSGYGINI DRFRDNLTYF SSDFMINHQE DAHEFLQSFL DKLERCCLDP KNQLGSVSSQ DLNIVDNVFG GGLMSTLCCC
301: NCNSVSNTFE PSLGWSLEIE DVNTLWKALE SFTCVEKLED QLTCDNCKEK VTKEKQLRFD KLPPVATFHL KRFTNDGVTM EKIFDHIEFP LELDLSPFMS
401: SNHDPEVSTR YHLYAFVEHI GIRATFGHYS SYVRSAPETW HNFDDSKVTR ISEERVLSRP AYILFYAREG TPWFSSTFEQ LKTVFEATPL HFSPVSVLDN
501: SYESVDNSSK ACNDSVGVSI PDVKWPDSCC QEPKEEVFHS AESSNNEDSS AMIDALGSPQ SEKPFAETSQ QTEPESCPTE NKAYIDKSEK PFAETSQPKE
601: PKPFADRASI DAPLLKVQNQ DISPKRKAGE RATLGGPKLK YQKPNSHQKR QGTFQIQRAH LQTKKQEESR KTKRPLFRSN VAASAPDPKY KNHALSYLNR
701: AQTPRARKLA NALSDSPTKK KKSSNMRRSI KL
101: QISPVSNNNH LRITNTSDSY LYRPPRRYIE YESDDDELNK MEPTKPLQLS WWYPRIEPTG VGAGLYNSGN TCFIASVLQC FTHTVPLIDS LRSFMYGNPC
201: NCGNEKFCVM QALRDHIELA LRSSGYGINI DRFRDNLTYF SSDFMINHQE DAHEFLQSFL DKLERCCLDP KNQLGSVSSQ DLNIVDNVFG GGLMSTLCCC
301: NCNSVSNTFE PSLGWSLEIE DVNTLWKALE SFTCVEKLED QLTCDNCKEK VTKEKQLRFD KLPPVATFHL KRFTNDGVTM EKIFDHIEFP LELDLSPFMS
401: SNHDPEVSTR YHLYAFVEHI GIRATFGHYS SYVRSAPETW HNFDDSKVTR ISEERVLSRP AYILFYAREG TPWFSSTFEQ LKTVFEATPL HFSPVSVLDN
501: SYESVDNSSK ACNDSVGVSI PDVKWPDSCC QEPKEEVFHS AESSNNEDSS AMIDALGSPQ SEKPFAETSQ QTEPESCPTE NKAYIDKSEK PFAETSQPKE
601: PKPFADRASI DAPLLKVQNQ DISPKRKAGE RATLGGPKLK YQKPNSHQKR QGTFQIQRAH LQTKKQEESR KTKRPLFRSN VAASAPDPKY KNHALSYLNR
701: AQTPRARKLA NALSDSPTKK KKSSNMRRSI KL
Arabidopsis Description
UBP21Ubiquitin carboxyl-terminal hydrolase 21 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIQ1]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.