Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra010268.1-P | Field mustard | cytosol | 90.63 | 93.5 |
| CDY23262 | Canola | nucleus | 87.05 | 93.42 |
| CDX72275 | Canola | cytosol | 57.92 | 91.89 |
| CDY28224 | Canola | endoplasmic reticulum, vacuole | 85.01 | 84.58 |
| CDX68701 | Canola | endoplasmic reticulum, extracellular | 84.33 | 82.91 |
| AT4G30890.2 | Thale cress | cytosol | 74.11 | 78.95 |
| GSMUA_Achr1P11380_001 | Banana | cytosol | 44.29 | 69.71 |
| KRH39864 | Soybean | cytosol | 53.66 | 59.21 |
| KRH23933 | Soybean | cytosol | 54.51 | 59.15 |
| GSMUA_Achr8P09770_001 | Banana | cytosol | 42.93 | 58.88 |
| VIT_13s0019g01690.t01 | Wine grape | cytosol | 53.83 | 57.14 |
| OQU81355 | Sorghum | cytosol, nucleus, plastid | 7.33 | 55.13 |
| Solyc01g068240.2.1 | Tomato | cytosol | 48.38 | 53.28 |
| Zm00001d022414_P001 | Maize | cytosol | 47.02 | 50.0 |
| PGSC0003DMT400033182 | Potato | cytosol | 11.93 | 49.65 |
| PGSC0003DMT400033175 | Potato | mitochondrion | 13.97 | 49.1 |
| Os07t0661300-01 | Rice | cytosol, plasma membrane | 39.52 | 47.44 |
| PGSC0003DMT400033184 | Potato | cytosol | 14.65 | 46.99 |
| TraesCS2A01G127200.3 | Wheat | cytosol | 45.49 | 35.7 |
| PGSC0003DMT400033173 | Potato | mitochondrion | 21.12 | 34.93 |
| HORVU2Hr1G022340.2 | Barley | cytosol | 44.97 | 34.78 |
| TraesCS2D01G129600.2 | Wheat | cytosol | 45.49 | 34.63 |
| TraesCS2B01G149000.2 | Wheat | cytosol | 44.8 | 34.11 |
| CDX76934 | Canola | nucleus | 15.84 | 26.27 |
| CDY13770 | Canola | nucleus | 15.84 | 26.12 |
| CDY68864 | Canola | nucleus | 16.01 | 25.27 |
| CDX69375 | Canola | nucleus | 15.84 | 25.07 |
| CDY63898 | Canola | nucleus | 16.01 | 23.62 |
| Zm00001d007096_P007 | Maize | mitochondrion | 44.97 | 22.32 |
| CDY68683 | Canola | endoplasmic reticulum, vacuole | 16.35 | 19.71 |
| CDY50263 | Canola | cytosol | 8.18 | 17.71 |
| CDY34761 | Canola | endoplasmic reticulum, vacuole | 17.72 | 16.15 |
| CDY45587 | Canola | endoplasmic reticulum, vacuole | 17.21 | 15.96 |
| CDX75188 | Canola | vacuole | 16.52 | 15.88 |
| CDX68773 | Canola | nucleus, plasma membrane | 16.52 | 15.8 |
| CDY20330 | Canola | vacuole | 17.21 | 15.71 |
| CDX76801 | Canola | endoplasmic reticulum, golgi, vacuole | 17.38 | 15.67 |
| CDY40119 | Canola | nucleus | 15.16 | 15.24 |
| CDX85744 | Canola | cytosol | 14.48 | 14.6 |
| CDX87681 | Canola | nucleus | 15.67 | 14.6 |
| CDY37145 | Canola | cytosol | 15.5 | 13.66 |
| CDX76553 | Canola | cytosol | 14.65 | 13.4 |
| CDY58499 | Canola | endoplasmic reticulum | 16.35 | 13.31 |
| CDY14564 | Canola | golgi | 17.04 | 13.12 |
| CDY08792 | Canola | vacuole | 16.7 | 13.08 |
| CDX75770 | Canola | mitochondrion, nucleus | 14.48 | 12.8 |
| CDX77686 | Canola | endoplasmic reticulum | 16.01 | 12.45 |
| CDX98449 | Canola | mitochondrion | 14.82 | 12.36 |
| CDX97571 | Canola | mitochondrion | 14.82 | 12.29 |
| CDY32735 | Canola | nucleus | 16.52 | 12.11 |
| CDY02782 | Canola | nucleus | 16.35 | 11.98 |
| CDX96790 | Canola | nucleus | 16.87 | 11.86 |
| CDY11838 | Canola | nucleus, plastid | 16.35 | 11.72 |
| CDX83925 | Canola | nucleus | 16.87 | 11.69 |
| CDX88651 | Canola | nucleus, plastid | 16.35 | 11.65 |
| CDY48465 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 17.38 | 11.64 |
| CDY65125 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 17.38 | 11.63 |
| CDY57464 | Canola | nucleus | 16.7 | 11.56 |
| CDY55010 | Canola | nucleus | 16.7 | 11.53 |
| CDY11021 | Canola | golgi | 19.08 | 11.1 |
| CDY03441 | Canola | golgi | 18.57 | 10.76 |
| CDX92643 | Canola | golgi | 18.4 | 10.66 |
| CDY34291 | Canola | golgi | 18.4 | 10.59 |
| CDX87682 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| MapMan:19.2.3.1.1.10 | Gene3D:3.90.70.10 | GO:A0A078HDN0 | UniProt:A0A078HDN0 | EnsemblPlants:CDY36465 | ProteinID:CDY36465 |
| ProteinID:CDY36465.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006464 | GO:GO:0006511 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016579 | GO:GO:0016787 | GO:GO:0019538 |
| GO:GO:0036459 | EnsemblPlantsGene:GSBRNA2T00062117001 | InterPro:IPR028889 | PFAM:PF00443 | ScanProsite:PS00972 | ScanProsite:PS00973 |
| PFscan:PS50235 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C19_UCH | SUPFAM:SSF54001 | UniParc:UPI0004EECD04 | InterPro:USP_CS |
| InterPro:USP_dom | : | : | : | : | : |
Description
BnaC03g67850DBnaC03g67850D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HDN0]
Coordinates
chrLK032376:+:339435..342550
Molecular Weight (calculated)
64389.0 Da
IEP (calculated)
8.365
GRAVY (calculated)
-0.465
Length
587 amino acids
Sequence
(BLAST)
(BLAST)
001: MLVDTCCVFV FGSFTEHETR SLLEQKPINP PQSHKEKSVK SIQFGSFNPV AENSPVNSAN GELKKGQTDE AVKSRPSSSR KEDTSFQSAL TQRSLDASRP
101: SSSHKEDKSF QSAESQKRLG ASRPSSSDKI NDNAAKKLSG EHVEENGIIK EVSERKPPLN NGVAEKAADP IGLEKLCVSD GESDSLCIAS SSKFQALDTD
201: IFSNDSSSGT TIPRKNSQMV PTESIPPMKD FTPRGLINAG NLCFLNATLQ ALLSCSPFVQ LLQGIQLQNI PKAESPTLAA FSEFISELDV PSSSSFRNNV
301: AVVESGRPFT PAMFERVLRN FTPDVLNNMS GRPRSEDAQE FLSFIMDQMH DELLKLRGVS PKLTASKSSV VSSANEDDEW ETVGPKNKSA VTRTQSFVPS
401: QLSDIFGGQL RSVVKAKGNK DSATVQPYLL LHLDIHPEAV STIEDALHLF SAPEDLEGYR ASVTGKAGVV SARKSIKIQK LSKIMILHLM RFSYGNQGST
501: KLHKRVHFPL DLNLGRYLLV SPSNGGLKYE LVATITHHGR DPSKGHYTTD ARRKNNQWLR FDDASVTAIG TKQVLHDQAY VLFYKQV
101: SSSHKEDKSF QSAESQKRLG ASRPSSSDKI NDNAAKKLSG EHVEENGIIK EVSERKPPLN NGVAEKAADP IGLEKLCVSD GESDSLCIAS SSKFQALDTD
201: IFSNDSSSGT TIPRKNSQMV PTESIPPMKD FTPRGLINAG NLCFLNATLQ ALLSCSPFVQ LLQGIQLQNI PKAESPTLAA FSEFISELDV PSSSSFRNNV
301: AVVESGRPFT PAMFERVLRN FTPDVLNNMS GRPRSEDAQE FLSFIMDQMH DELLKLRGVS PKLTASKSSV VSSANEDDEW ETVGPKNKSA VTRTQSFVPS
401: QLSDIFGGQL RSVVKAKGNK DSATVQPYLL LHLDIHPEAV STIEDALHLF SAPEDLEGYR ASVTGKAGVV SARKSIKIQK LSKIMILHLM RFSYGNQGST
501: KLHKRVHFPL DLNLGRYLLV SPSNGGLKYE LVATITHHGR DPSKGHYTTD ARRKNNQWLR FDDASVTAIG TKQVLHDQAY VLFYKQV
001: MSEKKVFVFG SFTEHETRSF FEQKPTKDPQ NSKDKCVGSI QFGSLNLAAE NSSVNTNGEL KKGEADGTVK SAGSQERLDA SRPASSDKNN DSDAKLPRKN
101: SLRVPEHVVQ NGIIKEISES NKSLNNGVAV KTDPIGLDNL SMSDGESDPV YKASSSKFQA LDNEDFSSDS SSGSIQRKKN LKVPTESVPP VKDFTPRGLI
201: NAGNLCFLNA TLQALLSCSP FVQLLQKIQL QDIPKADSPT LAAFSEFISE LDVPSSSSIR NNVTVVEAGR PFRPAMFEGV LRNFTPDVLN NMSGRPRQED
301: AQEFLSFIMD QMHDELLKLK EQSPKVTASK SSVISSANDD GDEWETVGPK NKSAVTRTQS FVPSELSEIF GGQLKSVVKA KGTKASATVQ PYLLLHLDIH
401: PDGVQGIEDA LHLFSAQEDL EGYRASVTGK TGVVSASKSI KIQKLSKIMI LHLMRFSYGS QGSTKLRKGV KFPLELNLNR SHLVSLSNES LRYELVATIT
501: HHGWDPSKGH YTTDARRKNG QWLRFDDASV TPIGTKLVLH DQAYVLFYKQ V
101: SLRVPEHVVQ NGIIKEISES NKSLNNGVAV KTDPIGLDNL SMSDGESDPV YKASSSKFQA LDNEDFSSDS SSGSIQRKKN LKVPTESVPP VKDFTPRGLI
201: NAGNLCFLNA TLQALLSCSP FVQLLQKIQL QDIPKADSPT LAAFSEFISE LDVPSSSSIR NNVTVVEAGR PFRPAMFEGV LRNFTPDVLN NMSGRPRQED
301: AQEFLSFIMD QMHDELLKLK EQSPKVTASK SSVISSANDD GDEWETVGPK NKSAVTRTQS FVPSELSEIF GGQLKSVVKA KGTKASATVQ PYLLLHLDIH
401: PDGVQGIEDA LHLFSAQEDL EGYRASVTGK TGVVSASKSI KIQKLSKIMI LHLMRFSYGS QGSTKLRKGV KFPLELNLNR SHLVSLSNES LRYELVATIT
501: HHGWDPSKGH YTTDARRKNG QWLRFDDASV TPIGTKLVLH DQAYVLFYKQ V
Arabidopsis Description
UBP24Ubiquitin carboxyl-terminal hydrolase 24 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPS3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.