Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G129600.2 | Wheat | cytosol | 88.67 | 87.29 |
| TraesCS2B01G149000.2 | Wheat | cytosol | 87.88 | 86.51 |
| TraesCS2A01G127200.3 | Wheat | cytosol | 85.24 | 86.5 |
| Os07t0661300-01 | Rice | cytosol, plasma membrane | 44.93 | 69.73 |
| Zm00001d022414_P001 | Maize | cytosol | 50.46 | 69.38 |
| GSMUA_Achr1P11380_001 | Banana | cytosol | 31.36 | 63.81 |
| CDX72275 | Canola | cytosol | 29.38 | 60.27 |
| Bra024037.1-P | Field mustard | cytosol | 29.91 | 56.75 |
| GSMUA_Achr8P09770_001 | Banana | cytosol | 31.49 | 55.84 |
| OQU90420 | Sorghum | mitochondrion | 51.12 | 52.65 |
| KRH39864 | Soybean | cytosol | 35.97 | 51.32 |
| KRH23933 | Soybean | cytosol | 35.84 | 50.28 |
| PGSC0003DMT400034298 | Potato | cytosol | 34.39 | 48.88 |
| VIT_13s0019g01690.t01 | Wine grape | cytosol | 35.57 | 48.82 |
| Solyc11g065210.1.1 | Tomato | cytosol | 34.26 | 48.69 |
| CDY23262 | Canola | nucleus | 34.78 | 48.26 |
| AT4G30890.2 | Thale cress | cytosol | 34.78 | 47.91 |
| Solyc01g068240.2.1 | Tomato | cytosol | 33.6 | 47.84 |
| PGSC0003DMT400033175 | Potato | mitochondrion | 10.28 | 46.71 |
| Bra010268.1-P | Field mustard | cytosol | 34.91 | 46.57 |
| PGSC0003DMT400033184 | Potato | cytosol | 11.2 | 46.45 |
| PGSC0003DMT400033182 | Potato | cytosol | 8.56 | 46.1 |
| CDY36465 | Canola | cytosol | 34.78 | 44.97 |
| Bra011230.1-P | Field mustard | endoplasmic reticulum, vacuole | 34.78 | 44.75 |
| CDY28224 | Canola | endoplasmic reticulum, vacuole | 34.78 | 44.75 |
| CDX68701 | Canola | endoplasmic reticulum, extracellular | 34.52 | 43.89 |
| PGSC0003DMT400033173 | Potato | mitochondrion | 16.73 | 35.77 |
| Zm00001d007096_P007 | Maize | mitochondrion | 50.99 | 32.71 |
| HORVU4Hr1G078590.1 | Barley | cytosol | 12.25 | 25.41 |
| HORVU6Hr1G050090.1 | Barley | nucleus, plastid | 12.25 | 22.79 |
| HORVU2Hr1G079230.7 | Barley | mitochondrion | 11.86 | 21.74 |
| HORVU2Hr1G114330.1 | Barley | cytosol | 10.94 | 14.82 |
| HORVU1Hr1G077630.2 | Barley | plastid | 11.33 | 13.25 |
| HORVU6Hr1G067180.4 | Barley | nucleus | 11.86 | 12.18 |
| HORVU5Hr1G069620.20 | Barley | cytosol, nucleus | 11.73 | 12.08 |
| HORVU7Hr1G030300.1 | Barley | nucleus | 13.04 | 10.65 |
| HORVU7Hr1G064340.3 | Barley | endoplasmic reticulum | 12.52 | 9.57 |
| HORVU7Hr1G111430.5 | Barley | cytosol, nucleus | 12.91 | 9.32 |
Protein Annotations
| MapMan:19.2.3.1.1.10 | Gene3D:3.90.70.10 | UniProt:A0A287HC12 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006464 |
| GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016579 |
| GO:GO:0016787 | GO:GO:0019538 | GO:GO:0036459 | EnsemblPlantsGene:HORVU2Hr1G022340 | EnsemblPlants:HORVU2Hr1G022340.2 | InterPro:IPR028889 |
| PFAM:PF00443 | ScanProsite:PS00972 | ScanProsite:PS00973 | PFscan:PS50235 | PANTHER:PTHR44747 | InterPro:Papain_like_cys_pep_sf |
| InterPro:Peptidase_C19_UCH | SUPFAM:SSF54001 | UniParc:UPI000B46F643 | InterPro:USP_CS | InterPro:USP_dom | SEG:seg |
Description
No Description!
Coordinates
chrchr2H:-:64607630..64614159
Molecular Weight (calculated)
80604.7 Da
IEP (calculated)
8.952
GRAVY (calculated)
-0.341
Length
759 amino acids
Sequence
(BLAST)
(BLAST)
001: LHPHIRPVHG IHTAAEMSGA DKVVLFGSFT EDETKLFQGQ PAKSEEKSWE LPEIQFGSLN FSVLSLEKVS NAITEGCAHS PKPTYGHTKD LAGSDQKETV
101: TSSLPNGGPV LFNGFPADVS PTNGILKNVK SEASVPSAGL ASNLKETKAT VPSAGPVSNV KKNETPVPSA HPVNDVKKNE ARPINNVKKE CTAPSAGPVN
201: NVKKAEATAP SAGPVNNVKK AEATAPSAGP VNNVKKAEAT APSAGPANNV KKAEATAPSA GPANNVKKAE AMVPSVKPAN NVKKPEAKVP SPGPVNNVKK
301: AEAMVPSPGP VNKVEAAAPS PGPANDVKKT ESVVPSVAPI KSISSSTPIA GSGPHHVGLR CTESSGSAML VTENGSAGAD APIIAAPADE SVTSSNEENK
401: PLLPHGLKNT GNICFLNATL QAFLSCFPFV QLVQDLKNRN IPKAGYPTLS AFIELVSQFD VLDESTMKKD ERFALVAAKV INPTMFDQVL RNFTPDVPAG
501: TSARPRQEDA QEFLSFAMDR MHDELLRLNG NGLNSKEGMV VSSDDDDAWE TVGRKNKSAI MRTQSFVPSD LSAIFGGKLQ SVVKAAGNKA SATVQPFLLL
601: HLDIFPDAVQ TLDDALHLFS TPESLEGYRT TAGKAGVVTA RKSFKIHELS KIMILHLKRF SYGNRGCTKL YKPLHFPLEL VLNRDLLSSP SSEGRRYELV
701: ATITHHGSGP ARGHYTADAK RDGGQWLRFD DGHVMPIHVN KVLHNPAYIL FYKQVKDCC
101: TSSLPNGGPV LFNGFPADVS PTNGILKNVK SEASVPSAGL ASNLKETKAT VPSAGPVSNV KKNETPVPSA HPVNDVKKNE ARPINNVKKE CTAPSAGPVN
201: NVKKAEATAP SAGPVNNVKK AEATAPSAGP VNNVKKAEAT APSAGPANNV KKAEATAPSA GPANNVKKAE AMVPSVKPAN NVKKPEAKVP SPGPVNNVKK
301: AEAMVPSPGP VNKVEAAAPS PGPANDVKKT ESVVPSVAPI KSISSSTPIA GSGPHHVGLR CTESSGSAML VTENGSAGAD APIIAAPADE SVTSSNEENK
401: PLLPHGLKNT GNICFLNATL QAFLSCFPFV QLVQDLKNRN IPKAGYPTLS AFIELVSQFD VLDESTMKKD ERFALVAAKV INPTMFDQVL RNFTPDVPAG
501: TSARPRQEDA QEFLSFAMDR MHDELLRLNG NGLNSKEGMV VSSDDDDAWE TVGRKNKSAI MRTQSFVPSD LSAIFGGKLQ SVVKAAGNKA SATVQPFLLL
601: HLDIFPDAVQ TLDDALHLFS TPESLEGYRT TAGKAGVVTA RKSFKIHELS KIMILHLKRF SYGNRGCTKL YKPLHFPLEL VLNRDLLSSP SSEGRRYELV
701: ATITHHGSGP ARGHYTADAK RDGGQWLRFD DGHVMPIHVN KVLHNPAYIL FYKQVKDCC
001: MSEKKVFVFG SFTEHETRSF FEQKPTKDPQ NSKDKCVGSI QFGSLNLAAE NSSVNTNGEL KKGEADGTVK SAGSQERLDA SRPASSDKNN DSDAKLPRKN
101: SLRVPEHVVQ NGIIKEISES NKSLNNGVAV KTDPIGLDNL SMSDGESDPV YKASSSKFQA LDNEDFSSDS SSGSIQRKKN LKVPTESVPP VKDFTPRGLI
201: NAGNLCFLNA TLQALLSCSP FVQLLQKIQL QDIPKADSPT LAAFSEFISE LDVPSSSSIR NNVTVVEAGR PFRPAMFEGV LRNFTPDVLN NMSGRPRQED
301: AQEFLSFIMD QMHDELLKLK EQSPKVTASK SSVISSANDD GDEWETVGPK NKSAVTRTQS FVPSELSEIF GGQLKSVVKA KGTKASATVQ PYLLLHLDIH
401: PDGVQGIEDA LHLFSAQEDL EGYRASVTGK TGVVSASKSI KIQKLSKIMI LHLMRFSYGS QGSTKLRKGV KFPLELNLNR SHLVSLSNES LRYELVATIT
501: HHGWDPSKGH YTTDARRKNG QWLRFDDASV TPIGTKLVLH DQAYVLFYKQ V
101: SLRVPEHVVQ NGIIKEISES NKSLNNGVAV KTDPIGLDNL SMSDGESDPV YKASSSKFQA LDNEDFSSDS SSGSIQRKKN LKVPTESVPP VKDFTPRGLI
201: NAGNLCFLNA TLQALLSCSP FVQLLQKIQL QDIPKADSPT LAAFSEFISE LDVPSSSSIR NNVTVVEAGR PFRPAMFEGV LRNFTPDVLN NMSGRPRQED
301: AQEFLSFIMD QMHDELLKLK EQSPKVTASK SSVISSANDD GDEWETVGPK NKSAVTRTQS FVPSELSEIF GGQLKSVVKA KGTKASATVQ PYLLLHLDIH
401: PDGVQGIEDA LHLFSAQEDL EGYRASVTGK TGVVSASKSI KIQKLSKIMI LHLMRFSYGS QGSTKLRKGV KFPLELNLNR SHLVSLSNES LRYELVATIT
501: HHGWDPSKGH YTTDARRKNG QWLRFDDASV TPIGTKLVLH DQAYVLFYKQ V
Arabidopsis Description
UBP24Ubiquitin carboxyl-terminal hydrolase 24 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPS3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.