Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 2
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU2Hr1G110110.2 | |
| HORVU4Hr1G011500.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G24560.1 | HORVU2Hr1G110110.2 | AT4G13930.1 | 23232097 |
| AT4G24560.1 | HORVU4Hr1G011500.1 | AT4G37930.1 | 23232097 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G282200.4 | Wheat | plastid | 80.97 | 81.29 |
| TraesCS7D01G280800.4 | Wheat | plastid | 80.97 | 81.05 |
| TraesCS7B01G179000.2 | Wheat | plastid | 80.97 | 80.97 |
| Zm00001d050489_P001 | Maize | nucleus | 32.02 | 69.58 |
| OQU80649 | Sorghum | nucleus | 52.87 | 65.14 |
| Os08t0478500-01 | Rice | plastid | 58.41 | 59.3 |
| HORVU5Hr1G069620.20 | Barley | cytosol, nucleus | 38.87 | 52.37 |
| GSMUA_Achr10P... | Banana | nucleus | 19.23 | 47.04 |
| GSMUA_Achr7P19010_001 | Banana | nucleus | 20.34 | 43.91 |
| GSMUA_Achr5P22990_001 | Banana | vacuole | 32.93 | 36.37 |
| AT5G65450.2 | Thale cress | endoplasmic reticulum, golgi, mitochondrion, nucleus | 27.19 | 36.0 |
| CDY08792 | Canola | vacuole | 26.99 | 35.78 |
| Bra024386.1-P | Field mustard | golgi | 27.09 | 35.07 |
| CDY14564 | Canola | golgi | 26.89 | 35.04 |
| VIT_00s0407g00030.t01 | Wine grape | golgi, vacuole | 25.68 | 34.46 |
| GSMUA_Achr10P... | Banana | golgi | 15.31 | 33.78 |
| VIT_00s0199g00030.t01 | Wine grape | vacuole | 29.91 | 32.89 |
| KRH69660 | Soybean | golgi | 29.91 | 31.66 |
| KRH74502 | Soybean | golgi, plasma membrane, vacuole | 29.41 | 31.5 |
| GSMUA_Achr7P19020_001 | Banana | endoplasmic reticulum, golgi | 12.08 | 31.09 |
| KRH16837 | Soybean | golgi | 30.71 | 29.19 |
| KRH52893 | Soybean | extracellular, golgi, vacuole | 26.08 | 29.17 |
| KRH72452 | Soybean | golgi, plasma membrane | 29.51 | 28.28 |
| KRH62182 | Soybean | golgi, vacuole | 31.82 | 27.77 |
| Solyc04g076210.2.1 | Tomato | nucleus | 30.51 | 27.57 |
| AT4G24560.1 | Thale cress | extracellular, golgi | 27.59 | 27.18 |
| CDY11021 | Canola | golgi | 27.49 | 27.06 |
| VIT_18s0001g07370.t01 | Wine grape | golgi, vacuole | 33.13 | 26.86 |
| CDX92643 | Canola | golgi | 27.39 | 26.85 |
| Bra019219.1-P | Field mustard | golgi | 27.29 | 26.78 |
| HORVU4Hr1G078590.1 | Barley | cytosol | 9.87 | 26.78 |
| CDY03441 | Canola | golgi | 27.29 | 26.75 |
| Bra013814.1-P | Field mustard | golgi | 27.09 | 26.37 |
| CDY34291 | Canola | golgi | 27.09 | 26.37 |
| HORVU2Hr1G079230.7 | Barley | mitochondrion | 9.97 | 23.91 |
| HORVU6Hr1G050090.1 | Barley | nucleus, plastid | 9.77 | 23.77 |
| HORVU1Hr1G077630.2 | Barley | plastid | 12.79 | 19.57 |
| HORVU7Hr1G111430.5 | Barley | cytosol, nucleus | 20.44 | 19.31 |
| HORVU6Hr1G067180.4 | Barley | nucleus | 12.69 | 17.05 |
| HORVU2Hr1G114330.1 | Barley | cytosol | 9.57 | 16.96 |
| HORVU7Hr1G030300.1 | Barley | nucleus | 14.7 | 15.7 |
| HORVU2Hr1G022340.2 | Barley | cytosol | 9.57 | 12.52 |
Protein Annotations
| MapMan:19.2.3.1.1.7 | Gene3D:3.90.70.10 | UniProt:A0A287WQ89 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006464 |
| GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016579 |
| GO:GO:0016787 | GO:GO:0019538 | GO:GO:0036459 | EnsemblPlantsGene:HORVU7Hr1G064340 | EnsemblPlants:HORVU7Hr1G064340.3 | InterPro:IPR028889 |
| PFAM:PF00443 | ScanProsite:PS00972 | PFscan:PS50235 | PANTHER:PTHR45499 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C19_UCH |
| SUPFAM:SSF54001 | UniParc:UPI000B487C9D | InterPro:USP_CS | InterPro:USP_dom | SEG:seg | : |
Description
No Description!
Coordinates
chrchr7H:-:317687666..317709623
Molecular Weight (calculated)
108785.0 Da
IEP (calculated)
8.012
GRAVY (calculated)
-0.562
Length
993 amino acids
Sequence
(BLAST)
(BLAST)
001: HHCTAGPFRY EIANSVLCSI GVLAAAKYCS KFCIQDSGSS PSNSTMFNLA GLTVRGLLLL SIGVLTLLFI QCHCSLTHSL CFVDPKVGVP VGLLQSTIHS
101: TQQQQHTAPP LPSPPQQHQQ LRPTPWANNS SNCPSCSWLN ISSFKCQISH WRKGHKEECH PPNANAKPDD GAPILVAKEG SLEHRRAYEE NVVPGVQPVH
201: VVKSSNDKRK DTLFKEVSAT TEIPEKGDSD NVVKLRQITP QVASFDSTRT ESNTKSTNFV ENSSYMKDSD EILVRKSQAS APKMNGLTSS IHEDISVHCK
301: DHGNTEDADV SEDCSRINHI RKPADRSNSQ TVATAVPAPK SSRTSLCVEV EPCKIKATGK EKSEGSKLVS SVLAVDKVSS IHGGRPVAPN PSKRADNPTD
401: RGXXXXXXXX SAANNLATSL KKIVRQQTTP KVVRHYPSEL TLFPYDVFIK LYDKVELRPF GLHNLGNSCY ANVVLQCLMF TRPLTTYLLG GFHSKNCSKK
501: AWCFMCEFER LIVEGKQGKT ALSPTGILSH LHEIGSSFGP GKQEDAHEFL RHSIDAMQSV CMKEARKGGA HCSAEETTLV QLIFGGYLRS KIKCTRCHIS
601: SEQYERMLDL TVEIDGDIGS LEEALQRFTS TEVLDGDNRY QCNRCKSYER AKKKLTISEA PNVLTIALKR YQSGKFGKIS KAIRFPETLN LSCYMNSTDD
701: NSPVYSLYGM VVHHDVMNAA FSGHYVCYVK DTHGKWYKID DSQVKPVSLE NVMSKCAYML LYARCSPRAP NSVRHAMMAN DPSYAKKAKH KPNSEQTPLQ
801: GGSLNRHQGA ELHRDCITDN LTRRFNEFGE APYPAAESPS PSESSSLFSN SDAGSHSTVS TDSSESTRNS TSNDDYEQYF FGSSDQMYLG GPRAAHEEIG
901: YMTYSRSRSA LGTSSSGQEV DEERSVEQRF GDSRGGWVEG GESSPLSYTH PSKQHLLTEQ YRQFGGSEHD PGEARGSVLL RRSAREKTAQ TFY
101: TQQQQHTAPP LPSPPQQHQQ LRPTPWANNS SNCPSCSWLN ISSFKCQISH WRKGHKEECH PPNANAKPDD GAPILVAKEG SLEHRRAYEE NVVPGVQPVH
201: VVKSSNDKRK DTLFKEVSAT TEIPEKGDSD NVVKLRQITP QVASFDSTRT ESNTKSTNFV ENSSYMKDSD EILVRKSQAS APKMNGLTSS IHEDISVHCK
301: DHGNTEDADV SEDCSRINHI RKPADRSNSQ TVATAVPAPK SSRTSLCVEV EPCKIKATGK EKSEGSKLVS SVLAVDKVSS IHGGRPVAPN PSKRADNPTD
401: RGXXXXXXXX SAANNLATSL KKIVRQQTTP KVVRHYPSEL TLFPYDVFIK LYDKVELRPF GLHNLGNSCY ANVVLQCLMF TRPLTTYLLG GFHSKNCSKK
501: AWCFMCEFER LIVEGKQGKT ALSPTGILSH LHEIGSSFGP GKQEDAHEFL RHSIDAMQSV CMKEARKGGA HCSAEETTLV QLIFGGYLRS KIKCTRCHIS
601: SEQYERMLDL TVEIDGDIGS LEEALQRFTS TEVLDGDNRY QCNRCKSYER AKKKLTISEA PNVLTIALKR YQSGKFGKIS KAIRFPETLN LSCYMNSTDD
701: NSPVYSLYGM VVHHDVMNAA FSGHYVCYVK DTHGKWYKID DSQVKPVSLE NVMSKCAYML LYARCSPRAP NSVRHAMMAN DPSYAKKAKH KPNSEQTPLQ
801: GGSLNRHQGA ELHRDCITDN LTRRFNEFGE APYPAAESPS PSESSSLFSN SDAGSHSTVS TDSSESTRNS TSNDDYEQYF FGSSDQMYLG GPRAAHEEIG
901: YMTYSRSRSA LGTSSSGQEV DEERSVEQRF GDSRGGWVEG GESSPLSYTH PSKQHLLTEQ YRQFGGSEHD PGEARGSVLL RRSAREKTAQ TFY
0001: MLLVLDLGIS SLVLVVSLVL PLIGLFVRHK WRVAAQRREE IRRLLIHASE EAARAELEAS VEFSSVAVSN VFHCPVCYCL ATTRCSRCKA VRYCSGKCQI
0101: IHWRQGHKDE CHPASIVYDS EDESDSDLRL GEENGQNTPE ETLLVGPEPV TIPIGESLLS NRARSPEDGN GDIADNKDDL IDKEEAVSVA ETSGSSFSGF
0201: SSSPRNDSGD EISRCESFSS SESERSESLL DAHVSVEPED TCFSTIEDAP SKLLSPKFVH LVESVDNLAN LPKLSVHKPE DDAGQNQSQS RSLHSLVTDR
0301: HPVSADPSLK SSDFWGTALG SAERVSDSCV KSKSGRPGNS SLHFSFGSGS SRDTSAAKVS EQRSSILKEA PRGTGYISDG VNLRERNAKR FDEAEIALPI
0401: SSSTDALSPL DSSNLSHVTL PKSKSASSEN GSMLAPLKVG EVQLLASKAS NTKKCADLMK HSPLGAKSVR VLDHQKQNGA VVQHINSLHG RSGLKASVLK
0501: VVDQWTRPKS ENEMAGRHGH KGLFPYEVFA KLYTYKIEFQ PCGLINVGNS CFANVVFQCL MFTPPLTTYF LQQFHSRACT KKEQCFTCGF EKLVVKAKEE
0601: KSPLSPNGLL SQLQNIGIFL GNGKEEDAHE FLRFVVDTMQ SVCIKASEYD MTKSSKLEDT TLIGLTFGGY LRSKIKCMKC QVKSELREKM MDLTVEIDGD
0701: ISTLDDALRR FTRTEILDGE NKYRCGSCKS YERAKKKLKI TEPPNVLTIA LKRFQAGKFG KLNKLIRFPE TLDLAPYVSG GSEKSHDYKL YGVIVHLDVM
0801: NAAFSGHYVC YIRNQNKWYK ADDSTVVTSD VERILTKGAY MLFYARCTPT PPRLAVCTKT EASNKKSRVP LPKANEKSTI SRSVSTSSPE LSSNTPGGGR
0901: SGNIQSFYSS FQRLQKILEE DSASDSSSLF DSNSDECSCS TDSTSMDDFA DFIFGDHQGR AHGQSETPSP TSSSSSSSPP FTRRSPLSRS SPETYGTSRH
1001: QLPLGGER
0101: IHWRQGHKDE CHPASIVYDS EDESDSDLRL GEENGQNTPE ETLLVGPEPV TIPIGESLLS NRARSPEDGN GDIADNKDDL IDKEEAVSVA ETSGSSFSGF
0201: SSSPRNDSGD EISRCESFSS SESERSESLL DAHVSVEPED TCFSTIEDAP SKLLSPKFVH LVESVDNLAN LPKLSVHKPE DDAGQNQSQS RSLHSLVTDR
0301: HPVSADPSLK SSDFWGTALG SAERVSDSCV KSKSGRPGNS SLHFSFGSGS SRDTSAAKVS EQRSSILKEA PRGTGYISDG VNLRERNAKR FDEAEIALPI
0401: SSSTDALSPL DSSNLSHVTL PKSKSASSEN GSMLAPLKVG EVQLLASKAS NTKKCADLMK HSPLGAKSVR VLDHQKQNGA VVQHINSLHG RSGLKASVLK
0501: VVDQWTRPKS ENEMAGRHGH KGLFPYEVFA KLYTYKIEFQ PCGLINVGNS CFANVVFQCL MFTPPLTTYF LQQFHSRACT KKEQCFTCGF EKLVVKAKEE
0601: KSPLSPNGLL SQLQNIGIFL GNGKEEDAHE FLRFVVDTMQ SVCIKASEYD MTKSSKLEDT TLIGLTFGGY LRSKIKCMKC QVKSELREKM MDLTVEIDGD
0701: ISTLDDALRR FTRTEILDGE NKYRCGSCKS YERAKKKLKI TEPPNVLTIA LKRFQAGKFG KLNKLIRFPE TLDLAPYVSG GSEKSHDYKL YGVIVHLDVM
0801: NAAFSGHYVC YIRNQNKWYK ADDSTVVTSD VERILTKGAY MLFYARCTPT PPRLAVCTKT EASNKKSRVP LPKANEKSTI SRSVSTSSPE LSSNTPGGGR
0901: SGNIQSFYSS FQRLQKILEE DSASDSSSLF DSNSDECSCS TDSTSMDDFA DFIFGDHQGR AHGQSETPSP TSSSSSSSPP FTRRSPLSRS SPETYGTSRH
1001: QLPLGGER
Arabidopsis Description
UBP16Ubiquitin carboxyl-terminal hydrolase 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9SB51]
SUBAcon: [golgi,extracellular]
SUBAcon: [golgi,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.