Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 6
- plasma membrane 5
- golgi 4
- mitochondrion 1
- plastid 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
GSMUA_Achr7P19020_001 | Banana | endoplasmic reticulum, golgi | 28.14 | 65.54 |
GSMUA_Achr10P... | Banana | golgi | 31.81 | 63.56 |
GSMUA_Achr10P... | Banana | nucleus | 23.14 | 51.23 |
GSMUA_Achr7P19010_001 | Banana | nucleus | 24.25 | 47.39 |
GSMUA_Achr7P05090_001 | Banana | vacuole | 23.8 | 45.82 |
Zm00001d050489_P001 | Maize | nucleus | 22.02 | 43.33 |
VIT_00s0407g00030.t01 | Wine grape | golgi, vacuole | 33.48 | 40.68 |
AT5G65450.2 | Thale cress | endoplasmic reticulum, golgi, mitochondrion, nucleus | 33.59 | 40.27 |
CDY08792 | Canola | vacuole | 33.26 | 39.92 |
VIT_00s0199g00030.t01 | Wine grape | vacuole | 40.04 | 39.87 |
HORVU5Hr1G069620.20 | Barley | cytosol, nucleus | 32.37 | 39.48 |
Bra024386.1-P | Field mustard | golgi | 33.59 | 39.37 |
CDY14564 | Canola | golgi | 33.26 | 39.24 |
OQU80649 | Sorghum | nucleus | 34.71 | 38.71 |
KRH74502 | Soybean | golgi, plasma membrane, vacuole | 38.82 | 37.65 |
Os09t0464400-00 | Rice | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 38.6 | 37.39 |
Os08t0478500-01 | Rice | plastid | 40.38 | 37.12 |
KRH69660 | Soybean | golgi | 38.49 | 36.89 |
GSMUA_AchrUn_... | Banana | golgi, vacuole | 41.38 | 36.72 |
KRH72452 | Soybean | golgi, plasma membrane | 41.71 | 36.2 |
TraesCS5B01G243400.1 | Wheat | vacuole | 36.71 | 36.03 |
TraesCS7A01G282200.4 | Wheat | plastid | 39.49 | 35.89 |
KRH16837 | Soybean | golgi | 41.6 | 35.79 |
TraesCS7B01G179000.2 | Wheat | plastid | 39.49 | 35.75 |
TraesCS5D01G252600.2 | Wheat | endoplasmic reticulum, vacuole | 35.82 | 35.58 |
TraesCS7D01G280800.4 | Wheat | plastid | 39.15 | 35.48 |
OQU89635 | Sorghum | vacuole | 35.71 | 35.2 |
Zm00001d020769_P005 | Maize | nucleus | 33.48 | 35.16 |
CDY11021 | Canola | golgi | 39.04 | 34.79 |
CDY03441 | Canola | golgi | 38.71 | 34.35 |
KRH52893 | Soybean | extracellular, golgi, vacuole | 33.93 | 34.35 |
CDY34291 | Canola | golgi | 38.71 | 34.12 |
Bra013814.1-P | Field mustard | golgi | 38.6 | 34.02 |
Bra019219.1-P | Field mustard | golgi | 38.26 | 33.99 |
CDX92643 | Canola | golgi | 38.26 | 33.96 |
KRH62182 | Soybean | golgi, vacuole | 42.83 | 33.83 |
TraesCS5A01G246000.3 | Wheat | vacuole | 35.71 | 33.37 |
VIT_18s0001g07370.t01 | Wine grape | golgi, vacuole | 45.16 | 33.14 |
AT4G24560.1 | Thale cress | extracellular, golgi | 36.93 | 32.94 |
HORVU7Hr1G064340.3 | Barley | endoplasmic reticulum | 36.37 | 32.93 |
Solyc04g076210.2.1 | Tomato | nucleus | 39.38 | 32.21 |
GSMUA_Achr3P03560_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 28.7 | 30.79 |
GSMUA_Achr10P... | Banana | cytosol | 11.46 | 29.86 |
GSMUA_Achr7P19170_001 | Banana | cytosol | 4.34 | 29.1 |
GSMUA_Achr4P19070_001 | Banana | cytosol, golgi, mitochondrion, plastid | 11.23 | 28.69 |
GSMUA_Achr8P14390_001 | Banana | cytosol | 11.57 | 28.42 |
GSMUA_Achr10P... | Banana | nucleus | 11.46 | 27.54 |
GSMUA_Achr3P17560_001 | Banana | endoplasmic reticulum, golgi | 27.92 | 27.11 |
GSMUA_Achr2P20080_001 | Banana | plasma membrane | 28.14 | 26.89 |
GSMUA_Achr7P05330_001 | Banana | cytosol | 9.34 | 26.33 |
GSMUA_Achr7P19160_001 | Banana | mitochondrion | 8.9 | 26.23 |
GSMUA_Achr1P11380_001 | Banana | cytosol | 10.46 | 25.2 |
GSMUA_Achr3P04660_001 | Banana | nucleus | 15.02 | 22.5 |
GSMUA_Achr8P09770_001 | Banana | cytosol | 10.57 | 22.2 |
GSMUA_Achr1P10260_001 | Banana | endoplasmic reticulum, plasma membrane | 27.14 | 21.57 |
GSMUA_Achr5P13990_001 | Banana | endoplasmic reticulum | 13.68 | 20.99 |
GSMUA_Achr7P17050_001 | Banana | plastid | 12.01 | 20.69 |
GSMUA_Achr9P10330_001 | Banana | mitochondrion | 14.13 | 20.39 |
GSMUA_Achr4P01920_001 | Banana | nucleus | 16.13 | 15.01 |
GSMUA_Achr6P01970_001 | Banana | nucleus, plastid | 12.57 | 13.31 |
Protein Annotations
MapMan:19.2.3.1.1.7 | Gene3D:3.30.60.180 | Gene3D:3.90.70.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
GO:GO:0006464 | GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 |
GO:GO:0016579 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0036459 | GO:GO:0046872 | EnsemblPlantsGene:GSMUA_Achr5G22990_001 |
EnsemblPlants:GSMUA_Achr5P22990_001 | EnsemblPlants:GSMUA_Achr5T22990_001 | InterPro:IPR002893 | InterPro:IPR028889 | UniProt:M0T0X4 | PFAM:PF00443 |
PFAM:PF01753 | ScanProsite:PS00972 | ScanProsite:PS01360 | PFscan:PS50235 | PFscan:PS50865 | PANTHER:PTHR45492 |
InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C19_UCH | SUPFAM:SSF144232 | SUPFAM:SSF54001 | TMHMM:TMhelix | UniParc:UPI000295D32C |
InterPro:USP_CS | InterPro:USP_dom | InterPro:Znf_MYND | SEG:seg | : | : |
Description
Putative Ubiquitin carboxyl-terminal hydrolase 17 [Source:GMGC_GENE;Acc:GSMUA_Achr5G22990_001]
Coordinates
chr5:+:24853473..24862707
Molecular Weight (calculated)
99070.2 Da
IEP (calculated)
8.586
GRAVY (calculated)
-0.493
Length
899 amino acids
Sequence
(BLAST)
(BLAST)
001: MPLRGDLGPS AAALLVLLFA PVLAFVVRRR WRLAVARREE VRRLALLAAQ EASRAEVEAM ETYAAAWTSA AVAAKGVTKD PSARPECPVC FCPAIARCAR
101: CKAIRYCSGK CQIVHWRQGH KDECHPPPVN DNYNGATSVS CSEVVQAEQP GLEHKEDLNM KAVEIGKPHL LHNARLEKSS SSEIPTTSVR KAVNNNDANL
201: TTFSTPKLST SSPLVNGTFS SVDSTSEISS HVSASSKAKS QSENKKMQAS NKEESGSVAN GMKTEVQSLK SKACRPLASA SDQLSTNGGA HPVAIHKTSK
301: IGNASREPIR LSDSSGAIAN GLSKYAKRLV KQSTSPKVSR HYPSETMLFP YDLFIKLYNS DNIELRPCGL INCGNSCYAN AVLQCLAFTR PLTAYLLEGL
401: HSKRCPKKDW CFTCEFESLV MNTKQGKSPL SPIGILSHLH NIGSNFGHGK EEDAHEFLRY AIDIMQSVCL KEAGAKPDDV LAEETTLIQQ TFGGYLQSKI
501: RCYRCKSNSE RCERMMDLTV EIHGDIATLD EALSCFTSPE ILDGKNKYEC DRCKSRERAR KRLSILEAPN VLTIVLKRFQ SGKYGKLNKA VRFPEYLNLA
601: HYMSGDDASS MYQLYAVIVH KDVMNASFSG HYVCYVKDTQ GKWYKIDDSE VKPVELKKVL SKSAYMLLYA RCSPHAPSLV RKAISHDPLQ ARKIRSKEAS
701: GKSGGSSITE QRSHFYPQPM MGDRANFQSS DLFRPSLNDS SSDNSSLFDE GSSCSTESTR DSASTEENWE CMSGESDCIN SNSLRGSKES NGLTHSPLFS
801: RHSSKKVLHD DSGRNASSSG REIDHVEVGR LGPMKHQGGR TTCSEGSKSS SFLYHDKSQI CRVTEHCSTV EIDWINPSEV KSGVVLRRPS REITAQTFY
101: CKAIRYCSGK CQIVHWRQGH KDECHPPPVN DNYNGATSVS CSEVVQAEQP GLEHKEDLNM KAVEIGKPHL LHNARLEKSS SSEIPTTSVR KAVNNNDANL
201: TTFSTPKLST SSPLVNGTFS SVDSTSEISS HVSASSKAKS QSENKKMQAS NKEESGSVAN GMKTEVQSLK SKACRPLASA SDQLSTNGGA HPVAIHKTSK
301: IGNASREPIR LSDSSGAIAN GLSKYAKRLV KQSTSPKVSR HYPSETMLFP YDLFIKLYNS DNIELRPCGL INCGNSCYAN AVLQCLAFTR PLTAYLLEGL
401: HSKRCPKKDW CFTCEFESLV MNTKQGKSPL SPIGILSHLH NIGSNFGHGK EEDAHEFLRY AIDIMQSVCL KEAGAKPDDV LAEETTLIQQ TFGGYLQSKI
501: RCYRCKSNSE RCERMMDLTV EIHGDIATLD EALSCFTSPE ILDGKNKYEC DRCKSRERAR KRLSILEAPN VLTIVLKRFQ SGKYGKLNKA VRFPEYLNLA
601: HYMSGDDASS MYQLYAVIVH KDVMNASFSG HYVCYVKDTQ GKWYKIDDSE VKPVELKKVL SKSAYMLLYA RCSPHAPSLV RKAISHDPLQ ARKIRSKEAS
701: GKSGGSSITE QRSHFYPQPM MGDRANFQSS DLFRPSLNDS SSDNSSLFDE GSSCSTESTR DSASTEENWE CMSGESDCIN SNSLRGSKES NGLTHSPLFS
801: RHSSKKVLHD DSGRNASSSG REIDHVEVGR LGPMKHQGGR TTCSEGSKSS SFLYHDKSQI CRVTEHCSTV EIDWINPSEV KSGVVLRRPS REITAQTFY
001: MMLVFLLIRR QWRSASVRRE EVIRLIALAT EESYLAEEVR PATVDYGGDS VSDVYRCAVC LYPTTTRCSQ CKSVRYCSSK CQILHWRRGH KEECRSPDYD
101: EEKEEYVQSD YDAKESNVDF PSRGTAYESS SNVSVDVACD MSTSRPSIHK VQPRSEAVDF TTSLNIKDNL YETRPLSRKK SRNRTDKVES ASNYSKGKTD
201: AKLRKLGNQN SRRSGDSANM SISDQFLSVG FEEEMNALKH ERITSEPSSA SAAMSSSSTL LLPSKANSKP KVSQASSSGL KTSVQKVVQH FRPPQSSKKS
301: QPSSSIDEMS FSYELFVKLY CDRVELQPFG LVNLGNSCYA NAVLQCLAFT RPLISYLIRG LHSKTCRKKS WCFVCEFEHL ILKARGGESP LSPIKILSKL
401: QKIGKHLGPG KEEDAHEFLR CAVDTMQSVF LKEAPAAGPF AEETTLVGLT FGGYLHSKIK CMACLHKSER PELMMDLTVE IDGDIGSLEE ALAQFTAYEV
501: LDGENRYFCG RCKSYQKAKK KLMILEGPNI LTVVLKRFQS DNFGKLSKPI HFPELLDISP YMSDPNHGDH PVYSLYAVVV HLDAMSTLFS GHYVCYIKTL
601: DGDWFKIDDS NVFPVQLETV LLEGAYMLLY ARDSPRPVSK NGGRKSKQRR NLAAIPSRKG NKKQRDGDNN SLLPRVDWSS GSLSSMFSSS DTTSSCSTKD
701: SSGIENLSDY LFGGVEPVWK WDRHNKSQTF D
101: EEKEEYVQSD YDAKESNVDF PSRGTAYESS SNVSVDVACD MSTSRPSIHK VQPRSEAVDF TTSLNIKDNL YETRPLSRKK SRNRTDKVES ASNYSKGKTD
201: AKLRKLGNQN SRRSGDSANM SISDQFLSVG FEEEMNALKH ERITSEPSSA SAAMSSSSTL LLPSKANSKP KVSQASSSGL KTSVQKVVQH FRPPQSSKKS
301: QPSSSIDEMS FSYELFVKLY CDRVELQPFG LVNLGNSCYA NAVLQCLAFT RPLISYLIRG LHSKTCRKKS WCFVCEFEHL ILKARGGESP LSPIKILSKL
401: QKIGKHLGPG KEEDAHEFLR CAVDTMQSVF LKEAPAAGPF AEETTLVGLT FGGYLHSKIK CMACLHKSER PELMMDLTVE IDGDIGSLEE ALAQFTAYEV
501: LDGENRYFCG RCKSYQKAKK KLMILEGPNI LTVVLKRFQS DNFGKLSKPI HFPELLDISP YMSDPNHGDH PVYSLYAVVV HLDAMSTLFS GHYVCYIKTL
601: DGDWFKIDDS NVFPVQLETV LLEGAYMLLY ARDSPRPVSK NGGRKSKQRR NLAAIPSRKG NKKQRDGDNN SLLPRVDWSS GSLSSMFSSS DTTSSCSTKD
701: SSGIENLSDY LFGGVEPVWK WDRHNKSQTF D
Arabidopsis Description
UBP17ubiquitin-specific protease 17 [Source:TAIR;Acc:AT5G65450]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.