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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 6
  • plasma membrane 5
  • golgi 4
  • mitochondrion 1
  • plastid 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr7P19020_001 Banana endoplasmic reticulum, golgi 28.14 65.54
GSMUA_Achr10P... Banana golgi 31.81 63.56
GSMUA_Achr10P... Banana nucleus 23.14 51.23
GSMUA_Achr7P19010_001 Banana nucleus 24.25 47.39
GSMUA_Achr7P05090_001 Banana vacuole 23.8 45.82
Zm00001d050489_P001 Maize nucleus 22.02 43.33
VIT_00s0407g00030.t01 Wine grape golgi, vacuole 33.48 40.68
AT5G65450.2 Thale cress endoplasmic reticulum, golgi, mitochondrion, nucleus 33.59 40.27
CDY08792 Canola vacuole 33.26 39.92
VIT_00s0199g00030.t01 Wine grape vacuole 40.04 39.87
HORVU5Hr1G069620.20 Barley cytosol, nucleus 32.37 39.48
Bra024386.1-P Field mustard golgi 33.59 39.37
CDY14564 Canola golgi 33.26 39.24
OQU80649 Sorghum nucleus 34.71 38.71
KRH74502 Soybean golgi, plasma membrane, vacuole 38.82 37.65
Os09t0464400-00 Rice endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole 38.6 37.39
Os08t0478500-01 Rice plastid 40.38 37.12
KRH69660 Soybean golgi 38.49 36.89
GSMUA_AchrUn_... Banana golgi, vacuole 41.38 36.72
KRH72452 Soybean golgi, plasma membrane 41.71 36.2
TraesCS5B01G243400.1 Wheat vacuole 36.71 36.03
TraesCS7A01G282200.4 Wheat plastid 39.49 35.89
KRH16837 Soybean golgi 41.6 35.79
TraesCS7B01G179000.2 Wheat plastid 39.49 35.75
TraesCS5D01G252600.2 Wheat endoplasmic reticulum, vacuole 35.82 35.58
TraesCS7D01G280800.4 Wheat plastid 39.15 35.48
OQU89635 Sorghum vacuole 35.71 35.2
Zm00001d020769_P005 Maize nucleus 33.48 35.16
CDY11021 Canola golgi 39.04 34.79
CDY03441 Canola golgi 38.71 34.35
KRH52893 Soybean extracellular, golgi, vacuole 33.93 34.35
CDY34291 Canola golgi 38.71 34.12
Bra013814.1-P Field mustard golgi 38.6 34.02
Bra019219.1-P Field mustard golgi 38.26 33.99
CDX92643 Canola golgi 38.26 33.96
KRH62182 Soybean golgi, vacuole 42.83 33.83
TraesCS5A01G246000.3 Wheat vacuole 35.71 33.37
VIT_18s0001g07370.t01 Wine grape golgi, vacuole 45.16 33.14
AT4G24560.1 Thale cress extracellular, golgi 36.93 32.94
HORVU7Hr1G064340.3 Barley endoplasmic reticulum 36.37 32.93
Solyc04g076210.2.1 Tomato nucleus 39.38 32.21
GSMUA_Achr3P03560_001 Banana endoplasmic reticulum, plasma membrane, vacuole 28.7 30.79
GSMUA_Achr10P... Banana cytosol 11.46 29.86
GSMUA_Achr7P19170_001 Banana cytosol 4.34 29.1
GSMUA_Achr4P19070_001 Banana cytosol, golgi, mitochondrion, plastid 11.23 28.69
GSMUA_Achr8P14390_001 Banana cytosol 11.57 28.42
GSMUA_Achr10P... Banana nucleus 11.46 27.54
GSMUA_Achr3P17560_001 Banana endoplasmic reticulum, golgi 27.92 27.11
GSMUA_Achr2P20080_001 Banana plasma membrane 28.14 26.89
GSMUA_Achr7P05330_001 Banana cytosol 9.34 26.33
GSMUA_Achr7P19160_001 Banana mitochondrion 8.9 26.23
GSMUA_Achr1P11380_001 Banana cytosol 10.46 25.2
GSMUA_Achr3P04660_001 Banana nucleus 15.02 22.5
GSMUA_Achr8P09770_001 Banana cytosol 10.57 22.2
GSMUA_Achr1P10260_001 Banana endoplasmic reticulum, plasma membrane 27.14 21.57
GSMUA_Achr5P13990_001 Banana endoplasmic reticulum 13.68 20.99
GSMUA_Achr7P17050_001 Banana plastid 12.01 20.69
GSMUA_Achr9P10330_001 Banana mitochondrion 14.13 20.39
GSMUA_Achr4P01920_001 Banana nucleus 16.13 15.01
GSMUA_Achr6P01970_001 Banana nucleus, plastid 12.57 13.31
Protein Annotations
MapMan:19.2.3.1.1.7Gene3D:3.30.60.180Gene3D:3.90.70.10GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0006464GO:GO:0006511GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009987
GO:GO:0016579GO:GO:0016787GO:GO:0019538GO:GO:0036459GO:GO:0046872EnsemblPlantsGene:GSMUA_Achr5G22990_001
EnsemblPlants:GSMUA_Achr5P22990_001EnsemblPlants:GSMUA_Achr5T22990_001InterPro:IPR002893InterPro:IPR028889UniProt:M0T0X4PFAM:PF00443
PFAM:PF01753ScanProsite:PS00972ScanProsite:PS01360PFscan:PS50235PFscan:PS50865PANTHER:PTHR45492
InterPro:Papain_like_cys_pep_sfInterPro:Peptidase_C19_UCHSUPFAM:SSF144232SUPFAM:SSF54001TMHMM:TMhelixUniParc:UPI000295D32C
InterPro:USP_CSInterPro:USP_domInterPro:Znf_MYNDSEG:seg::
Description
Putative Ubiquitin carboxyl-terminal hydrolase 17 [Source:GMGC_GENE;Acc:GSMUA_Achr5G22990_001]
Coordinates
chr5:+:24853473..24862707
Molecular Weight (calculated)
99070.2 Da
IEP (calculated)
8.586
GRAVY (calculated)
-0.493
Length
899 amino acids
Sequence
(BLAST)
001: MPLRGDLGPS AAALLVLLFA PVLAFVVRRR WRLAVARREE VRRLALLAAQ EASRAEVEAM ETYAAAWTSA AVAAKGVTKD PSARPECPVC FCPAIARCAR
101: CKAIRYCSGK CQIVHWRQGH KDECHPPPVN DNYNGATSVS CSEVVQAEQP GLEHKEDLNM KAVEIGKPHL LHNARLEKSS SSEIPTTSVR KAVNNNDANL
201: TTFSTPKLST SSPLVNGTFS SVDSTSEISS HVSASSKAKS QSENKKMQAS NKEESGSVAN GMKTEVQSLK SKACRPLASA SDQLSTNGGA HPVAIHKTSK
301: IGNASREPIR LSDSSGAIAN GLSKYAKRLV KQSTSPKVSR HYPSETMLFP YDLFIKLYNS DNIELRPCGL INCGNSCYAN AVLQCLAFTR PLTAYLLEGL
401: HSKRCPKKDW CFTCEFESLV MNTKQGKSPL SPIGILSHLH NIGSNFGHGK EEDAHEFLRY AIDIMQSVCL KEAGAKPDDV LAEETTLIQQ TFGGYLQSKI
501: RCYRCKSNSE RCERMMDLTV EIHGDIATLD EALSCFTSPE ILDGKNKYEC DRCKSRERAR KRLSILEAPN VLTIVLKRFQ SGKYGKLNKA VRFPEYLNLA
601: HYMSGDDASS MYQLYAVIVH KDVMNASFSG HYVCYVKDTQ GKWYKIDDSE VKPVELKKVL SKSAYMLLYA RCSPHAPSLV RKAISHDPLQ ARKIRSKEAS
701: GKSGGSSITE QRSHFYPQPM MGDRANFQSS DLFRPSLNDS SSDNSSLFDE GSSCSTESTR DSASTEENWE CMSGESDCIN SNSLRGSKES NGLTHSPLFS
801: RHSSKKVLHD DSGRNASSSG REIDHVEVGR LGPMKHQGGR TTCSEGSKSS SFLYHDKSQI CRVTEHCSTV EIDWINPSEV KSGVVLRRPS REITAQTFY
Best Arabidopsis Sequence Match ( AT5G65450.1 )
(BLAST)
001: MMLVFLLIRR QWRSASVRRE EVIRLIALAT EESYLAEEVR PATVDYGGDS VSDVYRCAVC LYPTTTRCSQ CKSVRYCSSK CQILHWRRGH KEECRSPDYD
101: EEKEEYVQSD YDAKESNVDF PSRGTAYESS SNVSVDVACD MSTSRPSIHK VQPRSEAVDF TTSLNIKDNL YETRPLSRKK SRNRTDKVES ASNYSKGKTD
201: AKLRKLGNQN SRRSGDSANM SISDQFLSVG FEEEMNALKH ERITSEPSSA SAAMSSSSTL LLPSKANSKP KVSQASSSGL KTSVQKVVQH FRPPQSSKKS
301: QPSSSIDEMS FSYELFVKLY CDRVELQPFG LVNLGNSCYA NAVLQCLAFT RPLISYLIRG LHSKTCRKKS WCFVCEFEHL ILKARGGESP LSPIKILSKL
401: QKIGKHLGPG KEEDAHEFLR CAVDTMQSVF LKEAPAAGPF AEETTLVGLT FGGYLHSKIK CMACLHKSER PELMMDLTVE IDGDIGSLEE ALAQFTAYEV
501: LDGENRYFCG RCKSYQKAKK KLMILEGPNI LTVVLKRFQS DNFGKLSKPI HFPELLDISP YMSDPNHGDH PVYSLYAVVV HLDAMSTLFS GHYVCYIKTL
601: DGDWFKIDDS NVFPVQLETV LLEGAYMLLY ARDSPRPVSK NGGRKSKQRR NLAAIPSRKG NKKQRDGDNN SLLPRVDWSS GSLSSMFSSS DTTSSCSTKD
701: SSGIENLSDY LFGGVEPVWK WDRHNKSQTF D
Arabidopsis Description
UBP17ubiquitin-specific protease 17 [Source:TAIR;Acc:AT5G65450]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.