Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 7
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra019219.1-P | Field mustard | golgi | 96.53 | 96.25 |
| CDX92643 | Canola | golgi | 94.65 | 94.27 |
| CDY03441 | Canola | golgi | 80.67 | 80.36 |
| CDY34291 | Canola | golgi | 81.07 | 80.2 |
| AT4G24560.1 | Thale cress | extracellular, golgi | 77.4 | 77.48 |
| KRH72452 | Soybean | golgi, plasma membrane | 42.72 | 41.6 |
| KRH16837 | Soybean | golgi | 42.62 | 41.15 |
| GSMUA_Achr7P19020_001 | Banana | endoplasmic reticulum, golgi | 15.56 | 40.67 |
| KRH52893 | Soybean | extracellular, golgi, vacuole | 35.28 | 40.09 |
| GSMUA_Achr10P... | Banana | golgi | 17.74 | 39.78 |
| KRH62182 | Soybean | golgi, vacuole | 44.5 | 39.46 |
| CDY08792 | Canola | vacuole | 29.04 | 39.12 |
| GSMUA_Achr5P22990_001 | Banana | vacuole | 34.79 | 39.04 |
| VIT_18s0001g07370.t01 | Wine grape | golgi, vacuole | 47.37 | 39.02 |
| CDY14564 | Canola | golgi | 29.24 | 38.71 |
| GSMUA_Achr10P... | Banana | nucleus | 14.77 | 36.7 |
| CDX68773 | Canola | nucleus, plasma membrane | 21.7 | 35.67 |
| CDX75188 | Canola | vacuole | 21.51 | 35.52 |
| GSMUA_Achr7P19010_001 | Banana | nucleus | 16.06 | 35.22 |
| Zm00001d050489_P001 | Maize | nucleus | 15.76 | 34.79 |
| CDY34761 | Canola | endoplasmic reticulum, vacuole | 22.2 | 34.78 |
| HORVU5Hr1G069620.20 | Barley | cytosol, nucleus | 25.37 | 34.74 |
| CDY45587 | Canola | endoplasmic reticulum, vacuole | 21.7 | 34.6 |
| CDY20330 | Canola | vacuole | 21.8 | 34.21 |
| CDX76801 | Canola | endoplasmic reticulum, golgi, vacuole | 22.0 | 34.1 |
| GSMUA_AchrUn_... | Banana | golgi, vacuole | 33.0 | 32.87 |
| Os08t0478500-01 | Rice | plastid | 31.42 | 32.41 |
| OQU80649 | Sorghum | nucleus | 25.27 | 31.64 |
| TraesCS5D01G252600.2 | Wheat | endoplasmic reticulum, vacuole | 28.25 | 31.49 |
| Os09t0464400-00 | Rice | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 28.74 | 31.25 |
| TraesCS5B01G243400.1 | Wheat | vacuole | 28.15 | 31.0 |
| TraesCS7A01G282200.4 | Wheat | plastid | 30.23 | 30.84 |
| TraesCS7B01G179000.2 | Wheat | plastid | 30.23 | 30.71 |
| TraesCS7D01G280800.4 | Wheat | plastid | 29.93 | 30.44 |
| Zm00001d020769_P005 | Maize | nucleus | 25.07 | 29.56 |
| TraesCS5A01G246000.3 | Wheat | vacuole | 28.15 | 29.52 |
| OQU89635 | Sorghum | vacuole | 26.36 | 29.17 |
| CDY48465 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 25.07 | 28.88 |
| CDX96790 | Canola | nucleus | 23.89 | 28.86 |
| CDY65125 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 25.07 | 28.85 |
| CDX83925 | Canola | nucleus | 23.89 | 28.45 |
| HORVU7Hr1G064340.3 | Barley | endoplasmic reticulum | 27.06 | 27.49 |
| CDY13770 | Canola | nucleus | 9.51 | 26.97 |
| CDX76934 | Canola | nucleus | 9.32 | 26.55 |
| CDX72275 | Canola | cytosol | 9.61 | 26.22 |
| CDX69375 | Canola | nucleus | 9.32 | 25.34 |
| CDY68864 | Canola | nucleus | 9.32 | 25.27 |
| CDY63898 | Canola | nucleus | 9.32 | 23.62 |
| CDY68683 | Canola | endoplasmic reticulum, vacuole | 9.91 | 20.53 |
| CDY23262 | Canola | nucleus | 11.0 | 20.29 |
| CDX76553 | Canola | cytosol | 12.49 | 19.63 |
| CDY40119 | Canola | nucleus | 11.3 | 19.52 |
| CDX85744 | Canola | cytosol | 11.2 | 19.42 |
| CDX87681 | Canola | nucleus | 12.09 | 19.37 |
| CDX97571 | Canola | mitochondrion | 13.58 | 19.35 |
| CDX98449 | Canola | mitochondrion | 13.38 | 19.18 |
| CDY36465 | Canola | cytosol | 11.1 | 19.08 |
| CDY28224 | Canola | endoplasmic reticulum, vacuole | 11.1 | 18.98 |
| CDX75770 | Canola | mitochondrion, nucleus | 12.49 | 18.98 |
| CDY37145 | Canola | cytosol | 12.39 | 18.77 |
| CDX68701 | Canola | endoplasmic reticulum, extracellular | 11.0 | 18.59 |
| CDY58499 | Canola | endoplasmic reticulum | 12.59 | 17.61 |
| CDX77686 | Canola | endoplasmic reticulum | 13.08 | 17.48 |
| CDY02782 | Canola | nucleus | 13.78 | 17.35 |
| CDY50263 | Canola | cytosol | 4.66 | 17.34 |
| CDY11838 | Canola | nucleus, plastid | 14.07 | 17.34 |
| CDY32735 | Canola | nucleus | 13.68 | 17.23 |
| CDX88651 | Canola | nucleus, plastid | 13.97 | 17.11 |
| CDY57464 | Canola | nucleus | 14.27 | 16.98 |
| CDY55010 | Canola | nucleus | 14.27 | 16.94 |
| CDX87682 | Canola | cytosol | 0.2 | 6.06 |
Protein Annotations
| MapMan:19.2.3.1.1.7 | Gene3D:3.30.60.180 | Gene3D:3.90.70.10 | GO:A0A078FCJ0 | UniProt:A0A078FCJ0 | EnsemblPlants:CDY11021 |
| ProteinID:CDY11021 | ProteinID:CDY11021.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0006464 | GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 |
| GO:GO:0016579 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0036459 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00048972001 |
| InterPro:IPR002893 | InterPro:IPR028889 | PFAM:PF00443 | PFAM:PF01753 | ScanProsite:PS00972 | ScanProsite:PS01360 |
| PFscan:PS50235 | PFscan:PS50865 | PANTHER:PTHR45492 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C19_UCH | SUPFAM:SSF144232 |
| SUPFAM:SSF54001 | TMHMM:TMhelix | UniParc:UPI0004EDCB30 | InterPro:USP_CS | InterPro:USP_dom | InterPro:Znf_MYND |
| SEG:seg | : | : | : | : | : |
Description
BnaA03g46800DBnaA03g46800D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FCJ0]
Coordinates
chrLK032008:-:662721..667401
Molecular Weight (calculated)
110803.0 Da
IEP (calculated)
7.446
GRAVY (calculated)
-0.487
Length
1009 amino acids
Sequence
(BLAST)
(BLAST)
0001: MLLVLDLGLS SLFLLISLVL PVVAFVVRRK WRLAALRREE IRRLLIHASQ EAARAELESS VEFSSVYVPS SFQCPVCYSP ASTRCSRCKA VRYCSGKCQI
0101: IHWRQGHRDE CHPASVLYNT DDEKSDCDLK FREGNEGLTP DETLLLHTEQ VTTNVQVREA ILSNPVISPE DGGGESADNK DELMDKEEAV SVAETSGSSF
0201: SGFSSSPRND SGDDDDISFC ESSSSSDSEI SEPPRDAHVS VESEETFFGN IDDVKSKPLS PKFVQLVESA NDLANLSKLS LNKPGGDAGQ KPSQSSSLVS
0301: SVGTDGHQRS ADPSLLKSSD FWGTALGSVE RVSENCDGSK SGKPGKSSLH LSLGSSRDIS AAKVSEHRAA LGTRNFSGEV NSRERIAKRF DEAEISLPRS
0401: SSLDVPSPLN PTVLSTVTLQ KSKSTSAGSG FMLAPMKVEE VQRLSSKTSD TREFADVMKH SALGAKSGRV LDHQKQNSVD VHRIHSLNGR SGMKASVLKD
0501: VDQWTKPKSL AENEIAGNHS HKGLFSYELF SKLYTSKIEF QPCGLINCGN SCFANVVFQC LMFTAPLTTY FLQQLHSRTC PNKEQCFTCG FEKLVLMAKE
0601: GKSSLSPSGL LSQLQNIGIR LGNGKQEDAH EFLRFVVDTM QSVCIKASGY DMPKTKKLED TTLIGLTFGG YLRSKIKCMK CQEKSERREK MMDLTVEIDG
0701: DISTLEEALH RFTRTEILDG ENKYKCGRCK SYERAKKKLK ITEPPNVLTI ALKRFQSGKF GKLNKLVRFP ETLDLTPYVS GGSEKSHDYK LYGVIVHLDT
0801: MNAAFSGHYV CYVRNSQNKW YKADDSTVVT SDVESVLTKG AYMLFYARCS PTPPRLVLCN KSEASNKKSS VPVPKATVSR SVSTASPVLS SNTPGGDRPG
0901: NIQSFYSSFQ RLQRILEEDS SSDSSSLFDS TSDECSCSTD STSMDDFADF IFGDNQGRAH GQSEAPSPTS SSSSSSPPFT RHSRLGDLSR SCQETCRNSR
1001: HRVSLGRER
0101: IHWRQGHRDE CHPASVLYNT DDEKSDCDLK FREGNEGLTP DETLLLHTEQ VTTNVQVREA ILSNPVISPE DGGGESADNK DELMDKEEAV SVAETSGSSF
0201: SGFSSSPRND SGDDDDISFC ESSSSSDSEI SEPPRDAHVS VESEETFFGN IDDVKSKPLS PKFVQLVESA NDLANLSKLS LNKPGGDAGQ KPSQSSSLVS
0301: SVGTDGHQRS ADPSLLKSSD FWGTALGSVE RVSENCDGSK SGKPGKSSLH LSLGSSRDIS AAKVSEHRAA LGTRNFSGEV NSRERIAKRF DEAEISLPRS
0401: SSLDVPSPLN PTVLSTVTLQ KSKSTSAGSG FMLAPMKVEE VQRLSSKTSD TREFADVMKH SALGAKSGRV LDHQKQNSVD VHRIHSLNGR SGMKASVLKD
0501: VDQWTKPKSL AENEIAGNHS HKGLFSYELF SKLYTSKIEF QPCGLINCGN SCFANVVFQC LMFTAPLTTY FLQQLHSRTC PNKEQCFTCG FEKLVLMAKE
0601: GKSSLSPSGL LSQLQNIGIR LGNGKQEDAH EFLRFVVDTM QSVCIKASGY DMPKTKKLED TTLIGLTFGG YLRSKIKCMK CQEKSERREK MMDLTVEIDG
0701: DISTLEEALH RFTRTEILDG ENKYKCGRCK SYERAKKKLK ITEPPNVLTI ALKRFQSGKF GKLNKLVRFP ETLDLTPYVS GGSEKSHDYK LYGVIVHLDT
0801: MNAAFSGHYV CYVRNSQNKW YKADDSTVVT SDVESVLTKG AYMLFYARCS PTPPRLVLCN KSEASNKKSS VPVPKATVSR SVSTASPVLS SNTPGGDRPG
0901: NIQSFYSSFQ RLQRILEEDS SSDSSSLFDS TSDECSCSTD STSMDDFADF IFGDNQGRAH GQSEAPSPTS SSSSSSPPFT RHSRLGDLSR SCQETCRNSR
1001: HRVSLGRER
0001: MLLVLDLGIS SLVLVVSLVL PLIGLFVRHK WRVAAQRREE IRRLLIHASE EAARAELEAS VEFSSVAVSN VFHCPVCYCL ATTRCSRCKA VRYCSGKCQI
0101: IHWRQGHKDE CHPASIVYDS EDESDSDLRL GEENGQNTPE ETLLVGPEPV TIPIGESLLS NRARSPEDGN GDIADNKDDL IDKEEAVSVA ETSGSSFSGF
0201: SSSPRNDSGD EISRCESFSS SESERSESLL DAHVSVEPED TCFSTIEDAP SKLLSPKFVH LVESVDNLAN LPKLSVHKPE DDAGQNQSQS RSLHSLVTDR
0301: HPVSADPSLK SSDFWGTALG SAERVSDSCV KSKSGRPGNS SLHFSFGSGS SRDTSAAKVS EQRSSILKEA PRGTGYISDG VNLRERNAKR FDEAEIALPI
0401: SSSTDALSPL DSSNLSHVTL PKSKSASSEN GSMLAPLKVG EVQLLASKAS NTKKCADLMK HSPLGAKSVR VLDHQKQNGA VVQHINSLHG RSGLKASVLK
0501: VVDQWTRPKS ENEMAGRHGH KGLFPYEVFA KLYTYKIEFQ PCGLINVGNS CFANVVFQCL MFTPPLTTYF LQQFHSRACT KKEQCFTCGF EKLVVKAKEE
0601: KSPLSPNGLL SQLQNIGIFL GNGKEEDAHE FLRFVVDTMQ SVCIKASEYD MTKSSKLEDT TLIGLTFGGY LRSKIKCMKC QVKSELREKM MDLTVEIDGD
0701: ISTLDDALRR FTRTEILDGE NKYRCGSCKS YERAKKKLKI TEPPNVLTIA LKRFQAGKFG KLNKLIRFPE TLDLAPYVSG GSEKSHDYKL YGVIVHLDVM
0801: NAAFSGHYVC YIRNQNKWYK ADDSTVVTSD VERILTKGAY MLFYARCTPT PPRLAVCTKT EASNKKSRVP LPKANEKSTI SRSVSTSSPE LSSNTPGGGR
0901: SGNIQSFYSS FQRLQKILEE DSASDSSSLF DSNSDECSCS TDSTSMDDFA DFIFGDHQGR AHGQSETPSP TSSSSSSSPP FTRRSPLSRS SPETYGTSRH
1001: QLPLGGER
0101: IHWRQGHKDE CHPASIVYDS EDESDSDLRL GEENGQNTPE ETLLVGPEPV TIPIGESLLS NRARSPEDGN GDIADNKDDL IDKEEAVSVA ETSGSSFSGF
0201: SSSPRNDSGD EISRCESFSS SESERSESLL DAHVSVEPED TCFSTIEDAP SKLLSPKFVH LVESVDNLAN LPKLSVHKPE DDAGQNQSQS RSLHSLVTDR
0301: HPVSADPSLK SSDFWGTALG SAERVSDSCV KSKSGRPGNS SLHFSFGSGS SRDTSAAKVS EQRSSILKEA PRGTGYISDG VNLRERNAKR FDEAEIALPI
0401: SSSTDALSPL DSSNLSHVTL PKSKSASSEN GSMLAPLKVG EVQLLASKAS NTKKCADLMK HSPLGAKSVR VLDHQKQNGA VVQHINSLHG RSGLKASVLK
0501: VVDQWTRPKS ENEMAGRHGH KGLFPYEVFA KLYTYKIEFQ PCGLINVGNS CFANVVFQCL MFTPPLTTYF LQQFHSRACT KKEQCFTCGF EKLVVKAKEE
0601: KSPLSPNGLL SQLQNIGIFL GNGKEEDAHE FLRFVVDTMQ SVCIKASEYD MTKSSKLEDT TLIGLTFGGY LRSKIKCMKC QVKSELREKM MDLTVEIDGD
0701: ISTLDDALRR FTRTEILDGE NKYRCGSCKS YERAKKKLKI TEPPNVLTIA LKRFQAGKFG KLNKLIRFPE TLDLAPYVSG GSEKSHDYKL YGVIVHLDVM
0801: NAAFSGHYVC YIRNQNKWYK ADDSTVVTSD VERILTKGAY MLFYARCTPT PPRLAVCTKT EASNKKSRVP LPKANEKSTI SRSVSTSSPE LSSNTPGGGR
0901: SGNIQSFYSS FQRLQKILEE DSASDSSSLF DSNSDECSCS TDSTSMDDFA DFIFGDHQGR AHGQSETPSP TSSSSSSSPP FTRRSPLSRS SPETYGTSRH
1001: QLPLGGER
Arabidopsis Description
UBP16Ubiquitin carboxyl-terminal hydrolase 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9SB51]
SUBAcon: [golgi,extracellular]
SUBAcon: [golgi,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.