Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY45587 | Canola | endoplasmic reticulum, vacuole | 95.8 | 97.31 |
| Bra032080.1-P | Field mustard | endoplasmic reticulum, vacuole | 95.02 | 96.83 |
| CDY34761 | Canola | endoplasmic reticulum, vacuole | 83.51 | 83.39 |
| CDX76801 | Canola | endoplasmic reticulum, golgi, vacuole | 83.51 | 82.49 |
| AT2G24640.1 | Thale cress | endoplasmic reticulum, vacuole | 82.27 | 78.72 |
| CDX68773 | Canola | nucleus, plasma membrane | 64.54 | 67.59 |
| CDX75188 | Canola | vacuole | 63.3 | 66.61 |
| PGSC0003DMT400076065 | Potato | endoplasmic reticulum | 34.53 | 63.79 |
| GSMUA_Achr7P05090_001 | Banana | vacuole | 43.7 | 60.17 |
| KRH15706 | Soybean | golgi, plasma membrane, vacuole | 53.34 | 47.05 |
| KRH61621 | Soybean | golgi | 53.34 | 46.23 |
| KRH05330 | Soybean | golgi, plasma membrane | 52.88 | 46.13 |
| KRH52289 | Soybean | golgi | 52.41 | 45.91 |
| Solyc08g069050.2.1 | Tomato | extracellular | 52.88 | 43.76 |
| Solyc12g096430.1.1 | Tomato | nucleus, plastid | 41.84 | 43.25 |
| VIT_04s0069g00760.t01 | Wine grape | nucleus | 49.46 | 36.81 |
| Zm00001d036707_P006 | Maize | plasma membrane | 46.5 | 31.21 |
| KXG20513 | Sorghum | golgi, plasma membrane | 45.57 | 30.02 |
| Os06t0654000-01 | Rice | cytosol, nucleus | 42.92 | 29.24 |
| CDY14564 | Canola | golgi | 34.06 | 28.74 |
| CDY08792 | Canola | vacuole | 33.44 | 28.7 |
| TraesCS7D01G485600.1 | Wheat | golgi, plasma membrane | 44.63 | 26.95 |
| TraesCS7A01G498400.1 | Wheat | extracellular, golgi, plasma membrane | 44.32 | 26.89 |
| TraesCS7B01G405400.1 | Wheat | golgi, plasma membrane | 44.95 | 26.88 |
| CDX96790 | Canola | nucleus | 34.84 | 26.83 |
| GSMUA_Achr1P10260_001 | Banana | endoplasmic reticulum, plasma membrane | 47.12 | 26.79 |
| HORVU7Hr1G111430.5 | Barley | cytosol, nucleus | 43.7 | 26.74 |
| CDX83925 | Canola | nucleus | 35.15 | 26.68 |
| CDY65125 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 36.39 | 26.68 |
| CDY48465 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 35.93 | 26.37 |
| CDX76934 | Canola | nucleus | 14.31 | 25.99 |
| CDX72275 | Canola | cytosol | 14.93 | 25.95 |
| CDY13770 | Canola | nucleus | 14.31 | 25.84 |
| CDY68864 | Canola | nucleus | 14.46 | 25.0 |
| CDX69375 | Canola | nucleus | 14.31 | 24.8 |
| CDY63898 | Canola | nucleus | 14.31 | 23.12 |
| CDY11021 | Canola | golgi | 34.21 | 21.8 |
| CDX92643 | Canola | golgi | 33.9 | 21.52 |
| CDY03441 | Canola | golgi | 33.75 | 21.42 |
| CDY34291 | Canola | golgi | 33.75 | 21.27 |
| CDX75770 | Canola | mitochondrion, nucleus | 20.22 | 19.58 |
| CDY68683 | Canola | endoplasmic reticulum, vacuole | 14.62 | 19.3 |
| CDY23262 | Canola | nucleus | 15.86 | 18.65 |
| CDX98449 | Canola | mitochondrion | 20.06 | 18.32 |
| CDX97571 | Canola | mitochondrion | 20.06 | 18.22 |
| CDY40119 | Canola | nucleus | 16.33 | 17.98 |
| CDX85744 | Canola | cytosol | 16.17 | 17.87 |
| CDX76553 | Canola | cytosol | 17.73 | 17.76 |
| CDY36465 | Canola | cytosol | 15.71 | 17.21 |
| CDY28224 | Canola | endoplasmic reticulum, vacuole | 15.71 | 17.12 |
| CDX68701 | Canola | endoplasmic reticulum, extracellular | 15.86 | 17.09 |
| CDX87681 | Canola | nucleus | 16.64 | 16.98 |
| CDY02782 | Canola | nucleus | 21.15 | 16.98 |
| CDX88651 | Canola | nucleus, plastid | 21.46 | 16.75 |
| CDY37145 | Canola | cytosol | 17.26 | 16.67 |
| CDY58499 | Canola | endoplasmic reticulum | 18.66 | 16.64 |
| CDY11838 | Canola | nucleus, plastid | 21.15 | 16.61 |
| CDY32735 | Canola | nucleus | 20.53 | 16.48 |
| CDY50263 | Canola | cytosol | 6.84 | 16.24 |
| CDX77686 | Canola | endoplasmic reticulum | 18.97 | 16.16 |
| CDY55010 | Canola | nucleus | 21.0 | 15.88 |
| CDY57464 | Canola | nucleus | 20.84 | 15.8 |
| CDX87682 | Canola | cytosol | 0.16 | 3.03 |
Protein Annotations
| MapMan:19.2.3.1.1.7 | Gene3D:3.30.60.180 | Gene3D:3.90.70.10 | GO:A0A078G199 | UniProt:A0A078G199 | EnsemblPlants:CDY20330 |
| ProteinID:CDY20330 | ProteinID:CDY20330.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0006464 | GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016579 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0036459 |
| GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00012274001 | InterPro:IPR002893 | InterPro:IPR028889 | PFAM:PF00443 | PFAM:PF01753 |
| ScanProsite:PS00972 | ScanProsite:PS01360 | PFscan:PS50235 | PFscan:PS50865 | PANTHER:PTHR45499 | InterPro:Papain_like_cys_pep_sf |
| InterPro:Peptidase_C19_UCH | SUPFAM:SSF144232 | SUPFAM:SSF54001 | TMHMM:TMhelix | UniParc:UPI0004EE9C1B | InterPro:USP_CS |
| InterPro:USP_dom | InterPro:Znf_MYND | SEG:seg | : | : | : |
Description
BnaC04g36260DBnaC04g36260D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G199]
Coordinates
chrLK032105:-:663090..666885
Molecular Weight (calculated)
71325.6 Da
IEP (calculated)
4.727
GRAVY (calculated)
-0.404
Length
643 amino acids
Sequence
(BLAST)
(BLAST)
001: MHEVGLTWDL NSFTQLVLTL FLLSFGLLFF VKRTAAKYFE VGGGGSGGFD SDLRRDFMVP DASECSVCGN LTTKKCSRCK SVRYCSAECQ RSDWNGGHKL
101: KCKVVKTTTG SSPVRRDDLG LKASLFGNGS ASKTALSPKL SQIIKPGGVL FPYETFVQYF NWDKPGLAPC GLTNCGNSCF ANVVLQCLSW TRPLVAYLLE
201: RGHKRECERN DWCFLCEFET HLERANISRF PFSPMNIISR LPNIGGNLGY GRQEDAHELM RFVIDMMQSV CLDEFGGEKV VPPRAQETTL IQYIFGGLLQ
301: SQVQCTVCSN VSDQYENMMD LTVEIHGDAV SLEECLDQFT AKEWLQGDNL YKCDRCNDYV KACKRLSIRS APNILTVALK RFQGGRFGKL NKRISFPETF
401: DLGPYMSCCG GKGSDVYKLY AVIVHLDMLN ASFFGHYICY VKDFRGDWYR IDDSEVEKVE LEDVLSQRAY MLLYSRVQAR PSSLRSEEVQ DEKKTDTVDS
501: EAGEDGFVES SGEGTNGASV SSMCNGIISH SENPECKKDS SSSASSTVSE VAERVDTVDS ESNPSIDIEH DSGTDHQEAA VANGKEDPTV ENPAVDSPCS
601: DITNSSLSAT TESKHREKED SDTEMIDNAE SIQKDGEDQQ GSF
101: KCKVVKTTTG SSPVRRDDLG LKASLFGNGS ASKTALSPKL SQIIKPGGVL FPYETFVQYF NWDKPGLAPC GLTNCGNSCF ANVVLQCLSW TRPLVAYLLE
201: RGHKRECERN DWCFLCEFET HLERANISRF PFSPMNIISR LPNIGGNLGY GRQEDAHELM RFVIDMMQSV CLDEFGGEKV VPPRAQETTL IQYIFGGLLQ
301: SQVQCTVCSN VSDQYENMMD LTVEIHGDAV SLEECLDQFT AKEWLQGDNL YKCDRCNDYV KACKRLSIRS APNILTVALK RFQGGRFGKL NKRISFPETF
401: DLGPYMSCCG GKGSDVYKLY AVIVHLDMLN ASFFGHYICY VKDFRGDWYR IDDSEVEKVE LEDVLSQRAY MLLYSRVQAR PSSLRSEEVQ DEKKTDTVDS
501: EAGEDGFVES SGEGTNGASV SSMCNGIISH SENPECKKDS SSSASSTVSE VAERVDTVDS ESNPSIDIEH DSGTDHQEAA VANGKEDPTV ENPAVDSPCS
601: DITNSSLSAT TESKHREKED SDTEMIDNAE SIQKDGEDQQ GSF
001: MHEVGLFVDL NSFTQLILTL FFVSIGLLYF VKRTAAKYFE VGGGSGGFDR DHRRDFMVSD TAECSVCGKA TTKKCSRCKS VRYCSAACQT SDWKSGHKLK
101: CKGFRSTDSS PVRRDDIDFE ASLFGNRSAS KKTRIALVPQ QSQSKATLKP TDVLFPYESF VRYYNWDRPI MAPCGLTNCG NSCFANVVLQ CLSWTRPLVA
201: YLLERGHKRE CRRNDWCFLC EFENHLDRAN YSRFPFSPMN IISRLPNIGG NLGYGRQEDA HELMRFAIDM MQSVCLDEFG GEKVVPPRAQ ETTLIQYIFG
301: GLLQSQVQCT ACSNVSDQYE NMMDLTVEIH GDAVSLEECL DQFTAKEWLQ GDNLYKCDRC DDYVKACKRL SIRCAPNILT IALKRFQGGR FGKLNKRISF
401: PETFDLGPYM SGGGEGSDVY KLYAVIVHLD MLNASFFGHY ICYVKDFRGN WYRIDDSEVE KVELEDVLSQ RAYMLLYSRV QPRPSNLRSE ESQDEKKTDT
501: LNTESNQDGS VESSGVGTND TSVSSLCNGI ISHSEDPEYE KESSLSASVP VSEEGKEVDV KVDTVDSESN RSIDMEHDSG TDHQEEEANG KEDPTVENLA
601: VDSSCLDITT PSPSAATEFI PQENERSDTE SKPLEKEHSD TESNKPLEKE HLDSESKPLE KEHSDTEMID AQ
101: CKGFRSTDSS PVRRDDIDFE ASLFGNRSAS KKTRIALVPQ QSQSKATLKP TDVLFPYESF VRYYNWDRPI MAPCGLTNCG NSCFANVVLQ CLSWTRPLVA
201: YLLERGHKRE CRRNDWCFLC EFENHLDRAN YSRFPFSPMN IISRLPNIGG NLGYGRQEDA HELMRFAIDM MQSVCLDEFG GEKVVPPRAQ ETTLIQYIFG
301: GLLQSQVQCT ACSNVSDQYE NMMDLTVEIH GDAVSLEECL DQFTAKEWLQ GDNLYKCDRC DDYVKACKRL SIRCAPNILT IALKRFQGGR FGKLNKRISF
401: PETFDLGPYM SGGGEGSDVY KLYAVIVHLD MLNASFFGHY ICYVKDFRGN WYRIDDSEVE KVELEDVLSQ RAYMLLYSRV QPRPSNLRSE ESQDEKKTDT
501: LNTESNQDGS VESSGVGTND TSVSSLCNGI ISHSEDPEYE KESSLSASVP VSEEGKEVDV KVDTVDSESN RSIDMEHDSG TDHQEEEANG KEDPTVENLA
601: VDSSCLDITT PSPSAATEFI PQENERSDTE SKPLEKEHSD TESNKPLEKE HLDSESKPLE KEHSDTEMID AQ
Arabidopsis Description
UBP19Ubiquitin carboxyl-terminal hydrolase 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJA1]
SUBAcon: [endoplasmic reticulum,vacuole]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.