Subcellular Localization
min:
: max
Winner_takes_all: extracellular, golgi, plasma membrane
Predictor Summary:
Predictor Summary:
- golgi 2
- extracellular 2
- plasma membrane 2
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G485600.1 | Wheat | golgi, plasma membrane | 95.66 | 95.21 |
| TraesCS7B01G405400.1 | Wheat | golgi, plasma membrane | 94.34 | 93.02 |
| HORVU7Hr1G111430.5 | Barley | cytosol, nucleus | 86.51 | 87.25 |
| KXG20513 | Sorghum | golgi, plasma membrane | 60.0 | 65.16 |
| Zm00001d036707_P006 | Maize | plasma membrane | 56.89 | 62.94 |
| GSMUA_Achr7P05090_001 | Banana | vacuole | 27.36 | 62.1 |
| Os06t0654000-01 | Rice | cytosol, nucleus | 55.0 | 61.76 |
| PGSC0003DMT400076065 | Potato | endoplasmic reticulum | 18.21 | 55.46 |
| Bra007837.1-P | Field mustard | nucleus | 21.98 | 45.69 |
| Bra032080.1-P | Field mustard | endoplasmic reticulum, vacuole | 26.98 | 45.32 |
| CDY45587 | Canola | endoplasmic reticulum, vacuole | 26.79 | 44.87 |
| Bra011290.1-P | Field mustard | vacuole | 25.66 | 44.44 |
| CDY20330 | Canola | vacuole | 26.89 | 44.32 |
| KRH15706 | Soybean | golgi, plasma membrane, vacuole | 30.47 | 44.31 |
| AT4G31670.1 | Thale cress | endoplasmic reticulum, golgi | 26.23 | 44.06 |
| CDX75188 | Canola | vacuole | 25.38 | 44.03 |
| KRH52289 | Soybean | golgi | 30.38 | 43.87 |
| CDX76801 | Canola | endoplasmic reticulum, golgi, vacuole | 26.89 | 43.78 |
| KRH61621 | Soybean | golgi | 30.57 | 43.67 |
| CDX68773 | Canola | nucleus, plasma membrane | 25.28 | 43.65 |
| CDY34761 | Canola | endoplasmic reticulum, vacuole | 26.51 | 43.63 |
| KRH05330 | Soybean | golgi, plasma membrane | 30.09 | 43.28 |
| AT2G24640.1 | Thale cress | endoplasmic reticulum, vacuole | 27.36 | 43.15 |
| Solyc12g096430.1.1 | Tomato | nucleus, plastid | 24.72 | 42.12 |
| Solyc08g069050.2.1 | Tomato | extracellular | 29.81 | 40.67 |
| VIT_04s0069g00760.t01 | Wine grape | nucleus | 29.72 | 36.46 |
| GSMUA_Achr1P10260_001 | Banana | endoplasmic reticulum, plasma membrane | 32.36 | 30.33 |
| TraesCS4A01G406600.1 | Wheat | cytosol | 9.15 | 26.5 |
| TraesCS2A01G516100.1 | Wheat | mitochondrion | 8.96 | 25.68 |
| TraesCS2A01G340100.1 | Wheat | cytosol | 8.77 | 25.14 |
| TraesCS5A01G246000.3 | Wheat | vacuole | 21.51 | 23.7 |
| TraesCS6A01G192600.1 | Wheat | plasma membrane | 21.79 | 23.57 |
| TraesCS6A01G203500.1 | Wheat | nucleus, plastid | 8.77 | 22.79 |
| TraesCS7A01G282200.4 | Wheat | plastid | 20.19 | 21.64 |
| TraesCS1A01G329200.2 | Wheat | plastid | 11.32 | 18.49 |
| TraesCS7A01G147900.1 | Wheat | nucleus | 14.81 | 17.05 |
| TraesCS6A01G264800.1 | Wheat | nucleus | 11.51 | 16.62 |
| TraesCS1A01G192900.1 | Wheat | cytosol | 9.62 | 15.22 |
| TraesCS6A01G357500.1 | Wheat | mitochondrion, nucleus | 14.43 | 14.29 |
| TraesCS2A01G127200.3 | Wheat | cytosol | 9.53 | 13.5 |
Protein Annotations
| MapMan:19.2.3.1.1.7 | Gene3D:3.30.60.180 | Gene3D:3.90.70.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006464 |
| GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016579 |
| GO:GO:0016787 | GO:GO:0019538 | GO:GO:0036459 | InterPro:IPR002893 | InterPro:IPR028889 | PFAM:PF00443 |
| PFAM:PF01753 | ScanProsite:PS00972 | ScanProsite:PS01360 | PFscan:PS50235 | PFscan:PS50865 | InterPro:Papain_like_cys_pep_sf |
| InterPro:Peptidase_C19_UCH | SUPFAM:SSF144232 | SUPFAM:SSF54001 | EnsemblPlantsGene:TraesCS7A01G498400 | EnsemblPlants:TraesCS7A01G498400.1 | InterPro:USP_CS |
| InterPro:USP_dom | InterPro:Znf_MYND | TIGR:cd02661 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr7A:+:688960704..688967847
Molecular Weight (calculated)
115465.0 Da
IEP (calculated)
6.307
GRAVY (calculated)
-0.538
Length
1060 amino acids
Sequence
(BLAST)
(BLAST)
0001: MPGGGIGGGG PGFDFDFDFP AVIQAALVGF VLLAAAAAAL RRAASRYFLV DAAGFAAAYE DHHHHIAPAY AMPPQGDQQP PPSSPLGQGG QLQAAAPELG
0101: PCAQCGAAGT KKCSGCKRMR YCSGECQSKH WQSDHKFKCK QMKLLDPIDK LPCGVEANSK KSPVSGHRGI SLVPGHRKLN KVIYPYDDFL KLYNWKCNDS
0201: KYSDFLTCGL VNCGNSCFAN VVLQCLSYTR PLVAYLLGKD HYRQCAIRHE DWCFLCELQS HIQRAFDSVH PFAPTNILSH LPNIGGNLGF GRQEDAHEFM
0301: RFAIDKMQSA CLDEFGGEKV VDHSTQETTV IQHIFGGRLQ SQVQCTACGM VSNRYENMMD LTVEIHGDAE SLEKCLDQFT AIEWLDGDNK YKCDGCNDYV
0401: KARKHLTVHQ APNILTITLK RFQSGRFGKL NKKVTFPTKL DLTPYMSTTD GTDQYDLYAV VVHLDMLNAS FFGHYICYIK HYRGRWLKLD DCKGMAVDEE
0501: EVHAQGAYML LYSRRTARPV PLLPVKEPIK QEKQCKVPPL NGQNHLIPED VSLKCESLSK PSEDLREDSE SSNDSLHRMD TVDQVSDLDL HMNIERDKFV
0601: TNESIHQPIS SALHVLEEDT RDSGSLLEGN NTMRADQFGN YACESSSVNS SEEECKEPAP GIDSVDYMDI DMEAGTEVET QNVQQQPILG DSVGVIGNKT
0701: SVPTFENCMA GKPKPLFSIG FLDKPSRKKS DSREECQNGG SMAVSSQKID GHCNEHLSRP EQGLIANSLG GSPSSANGSV HCNGDVFVTP SNGVLVNGDT
0801: QSDNYSLDAA KRDVPSVRGF NPRPYRSPSS SNPNRNNTSK GEMSFFPRGF LANPRSGEKA VKVDDGLPFS NGNGKPSSSS SVNGNGISNT NSSPRSTTGG
0901: MGMSPGFLAK RSRESAAASF MGDLQSSNTS REQEHVGAAA LLPDKIQERR SSYCTTNGID AQHGAASVHD VSGHSDENGH AFVGTKKGIH GEKNGSNGTL
1001: DMHDSSCQMD ENGHGVLDIK DVVFREQNVS NGTLDTHGMG SEDADHVVKS PAAPAHDGLR
0101: PCAQCGAAGT KKCSGCKRMR YCSGECQSKH WQSDHKFKCK QMKLLDPIDK LPCGVEANSK KSPVSGHRGI SLVPGHRKLN KVIYPYDDFL KLYNWKCNDS
0201: KYSDFLTCGL VNCGNSCFAN VVLQCLSYTR PLVAYLLGKD HYRQCAIRHE DWCFLCELQS HIQRAFDSVH PFAPTNILSH LPNIGGNLGF GRQEDAHEFM
0301: RFAIDKMQSA CLDEFGGEKV VDHSTQETTV IQHIFGGRLQ SQVQCTACGM VSNRYENMMD LTVEIHGDAE SLEKCLDQFT AIEWLDGDNK YKCDGCNDYV
0401: KARKHLTVHQ APNILTITLK RFQSGRFGKL NKKVTFPTKL DLTPYMSTTD GTDQYDLYAV VVHLDMLNAS FFGHYICYIK HYRGRWLKLD DCKGMAVDEE
0501: EVHAQGAYML LYSRRTARPV PLLPVKEPIK QEKQCKVPPL NGQNHLIPED VSLKCESLSK PSEDLREDSE SSNDSLHRMD TVDQVSDLDL HMNIERDKFV
0601: TNESIHQPIS SALHVLEEDT RDSGSLLEGN NTMRADQFGN YACESSSVNS SEEECKEPAP GIDSVDYMDI DMEAGTEVET QNVQQQPILG DSVGVIGNKT
0701: SVPTFENCMA GKPKPLFSIG FLDKPSRKKS DSREECQNGG SMAVSSQKID GHCNEHLSRP EQGLIANSLG GSPSSANGSV HCNGDVFVTP SNGVLVNGDT
0801: QSDNYSLDAA KRDVPSVRGF NPRPYRSPSS SNPNRNNTSK GEMSFFPRGF LANPRSGEKA VKVDDGLPFS NGNGKPSSSS SVNGNGISNT NSSPRSTTGG
0901: MGMSPGFLAK RSRESAAASF MGDLQSSNTS REQEHVGAAA LLPDKIQERR SSYCTTNGID AQHGAASVHD VSGHSDENGH AFVGTKKGIH GEKNGSNGTL
1001: DMHDSSCQMD ENGHGVLDIK DVVFREQNVS NGTLDTHGMG SEDADHVVKS PAAPAHDGLR
001: MHEVGLFVDL NSFTQLILTL FFVSIGLLYF VKRTAAKYFE VGGGSGGFDR DHRRDFMVSD TAECSVCGKA TTKKCSRCKS VRYCSAACQT SDWKSGHKLK
101: CKGFRSTDSS PVRRDDIDFE ASLFGNRSAS KKTRIALVPQ QSQSKATLKP TDVLFPYESF VRYYNWDRPI MAPCGLTNCG NSCFANVVLQ CLSWTRPLVA
201: YLLERGHKRE CRRNDWCFLC EFENHLDRAN YSRFPFSPMN IISRLPNIGG NLGYGRQEDA HELMRFAIDM MQSVCLDEFG GEKVVPPRAQ ETTLIQYIFG
301: GLLQSQVQCT ACSNVSDQYE NMMDLTVEIH GDAVSLEECL DQFTAKEWLQ GDNLYKCDRC DDYVKACKRL SIRCAPNILT IALKRFQGGR FGKLNKRISF
401: PETFDLGPYM SGGGEGSDVY KLYAVIVHLD MLNASFFGHY ICYVKDFRGN WYRIDDSEVE KVELEDVLSQ RAYMLLYSRV QPRPSNLRSE ESQDEKKTDT
501: LNTESNQDGS VESSGVGTND TSVSSLCNGI ISHSEDPEYE KESSLSASVP VSEEGKEVDV KVDTVDSESN RSIDMEHDSG TDHQEEEANG KEDPTVENLA
601: VDSSCLDITT PSPSAATEFI PQENERSDTE SKPLEKEHSD TESNKPLEKE HLDSESKPLE KEHSDTEMID AQ
101: CKGFRSTDSS PVRRDDIDFE ASLFGNRSAS KKTRIALVPQ QSQSKATLKP TDVLFPYESF VRYYNWDRPI MAPCGLTNCG NSCFANVVLQ CLSWTRPLVA
201: YLLERGHKRE CRRNDWCFLC EFENHLDRAN YSRFPFSPMN IISRLPNIGG NLGYGRQEDA HELMRFAIDM MQSVCLDEFG GEKVVPPRAQ ETTLIQYIFG
301: GLLQSQVQCT ACSNVSDQYE NMMDLTVEIH GDAVSLEECL DQFTAKEWLQ GDNLYKCDRC DDYVKACKRL SIRCAPNILT IALKRFQGGR FGKLNKRISF
401: PETFDLGPYM SGGGEGSDVY KLYAVIVHLD MLNASFFGHY ICYVKDFRGN WYRIDDSEVE KVELEDVLSQ RAYMLLYSRV QPRPSNLRSE ESQDEKKTDT
501: LNTESNQDGS VESSGVGTND TSVSSLCNGI ISHSEDPEYE KESSLSASVP VSEEGKEVDV KVDTVDSESN RSIDMEHDSG TDHQEEEANG KEDPTVENLA
601: VDSSCLDITT PSPSAATEFI PQENERSDTE SKPLEKEHSD TESNKPLEKE HLDSESKPLE KEHSDTEMID AQ
Arabidopsis Description
UBP19Ubiquitin carboxyl-terminal hydrolase 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJA1]
SUBAcon: [endoplasmic reticulum,vacuole]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.