CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi

Predictor Summary:

nucleus 1
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d036707_P006	Maize	plasma membrane	83.4	84.97
GSMUA_Achr7P05090_001	Banana	vacuole	30.64	64.03
Os06t0654000-01	Rice	cytosol, nucleus	59.94	61.97
TraesCS7A01G498400.1	Wheat	extracellular, golgi, plasma membrane	65.16	60.0
TraesCS7D01G485600.1	Wheat	golgi, plasma membrane	64.86	59.44
TraesCS7B01G405400.1	Wheat	golgi, plasma membrane	64.86	58.88
HORVU7Hr1G111430.5	Barley	cytosol, nucleus	62.4	57.94
PGSC0003DMT400076065	Potato	endoplasmic reticulum	20.18	56.61
Bra007837.1-P	Field mustard	nucleus	24.9	47.65
Bra032080.1-P	Field mustard	endoplasmic reticulum, vacuole	30.43	47.07
CDY45587	Canola	endoplasmic reticulum, vacuole	30.23	46.6
CDY34761	Canola	endoplasmic reticulum, vacuole	30.33	45.96
CDX76801	Canola	endoplasmic reticulum, golgi, vacuole	30.53	45.78
Bra011290.1-P	Field mustard	vacuole	28.69	45.75
CDY20330	Canola	vacuole	30.02	45.57
AT4G31670.1	Thale cress	endoplasmic reticulum, golgi	29.41	45.48
KRH15706	Soybean	golgi, plasma membrane, vacuole	33.91	45.4
CDX75188	Canola	vacuole	28.38	45.34
CDX68773	Canola	nucleus, plasma membrane	28.18	44.79
KRH05330	Soybean	golgi, plasma membrane	33.81	44.78
AT2G24640.1	Thale cress	endoplasmic reticulum, vacuole	30.53	44.35
Solyc12g096430.1.1	Tomato	nucleus, plastid	27.97	43.89
KRH61621	Soybean	golgi	32.99	43.4
KRH52289	Soybean	golgi	32.27	42.92
Solyc08g069050.2.1	Tomato	extracellular	32.38	40.67
VIT_04s0069g00760.t01	Wine grape	nucleus	32.38	36.57
GSMUA_Achr1P10260_001	Banana	endoplasmic reticulum, plasma membrane	36.17	31.21
EER92723	Sorghum	nucleus	10.25	27.32
EES12269	Sorghum	cytosol	10.04	26.63
OQU84698	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	24.59	24.84
OQU80649	Sorghum	nucleus	19.36	23.45
EES07024	Sorghum	mitochondrion	9.94	23.15
OQU89635	Sorghum	vacuole	21.21	22.7
EES12962	Sorghum	plastid	11.99	20.71
KXG22316	Sorghum	plastid	12.09	17.43
OQU85579	Sorghum	nucleus	12.81	16.78
OQU81355	Sorghum	cytosol, nucleus, plastid	1.33	16.67
EER89337	Sorghum	nucleus	15.57	16.58
OQU90420	Sorghum	mitochondrion	10.86	14.38
OQU92076	Sorghum	nucleus	12.5	14.09

Protein Annotations

MapMan:19.2.3.1.1.7	Gene3D:3.30.60.180	Gene3D:3.90.70.10	UniProt:A0A194YKN0	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0006464	GO:GO:0006511	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009987	GO:GO:0016579	GO:GO:0016787	GO:GO:0019538	GO:GO:0036459	GO:GO:0046872
InterPro:IPR002893	InterPro:IPR028889	EnsemblPlants:KXG20513	ProteinID:KXG20513	ProteinID:KXG20513.1	PFAM:PF00443
PFAM:PF01753	ScanProsite:PS00972	ScanProsite:PS01360	PFscan:PS50235	PFscan:PS50865	PANTHER:PTHR45499
InterPro:Papain_like_cys_pep_sf	InterPro:Peptidase_C19_UCH	EnsemblPlantsGene:SORBI_3010G213500	SUPFAM:SSF144232	SUPFAM:SSF54001	UniParc:UPI0007F23B54
InterPro:USP_CS	InterPro:USP_dom	InterPro:Znf_MYND	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr10:-:55635934..55642561

Molecular Weight (calculated)

106110.0 Da

IEP (calculated)

5.566

GRAVY (calculated)

-0.471

Length

976 amino acids

Sequence
(BLAST)

001: MLGGGAGGGG AGLGLDFSAV IQAAVVGLVL FSAAVVAVRR AASRYFVVDA AGFAASYDDH HHDPMGNPQE QGAAAADLMG PCAACGGVAS KKCSRCKRVR
101: YCSQECQTNH WQSDHKFKCK QMKSLDPADK LSSGGEANNK KTSGFGRISL VPACKKISKG QVLFPYDEFL KLYNWKEFDF VPCGLMNCGN SCFANVVLQC
201: LSCTRPLVSY LLGKDHSREC SMRHEDWCFL CELQCHIHRA SGSLHPFAPT NILSHLPNIG GNLGFGRQED AHEFMRFAID KMQSACLDEY GGEKAVDLST
301: QETTIIQHIF GGRLQSQVQC TACGMVSNRY DNMMDLTVEI QGDAESLEKC LDQFTAIEWL DGDNKYKCDG CNDYVKARKH LSVHQAPNIL TITLKRFQSG
401: RFGKLNKRVT FPMELDLTPY TSCTDGSDLY DLYAVVVHLD MLNASFFGHY ICYIKGYQGR WYKIDDCKVM VVDEEEVHAQ GAYMLLYSRR TARPKPLVTV
501: DESVKQQQQC KLLPSNGQSH MILADATLNC ESSLKTTEDP LRQDCESNNG SLHEMDIKDQ ESDLDLCTSI EDDKFISNEN LHIPGSHVLE DTRAPDSFAE
601: QCEVQLGPPL EGGRITMSSV QFGSSTCKAS SEHSFAEQCE VPAPCIDSVD YMDLDTEAAA EVVLDDSVGR PNNNSEIPTA NGMSGEPKPS FSSGFFDKPS
701: RKRSSFAEED SAGSPRKLNG YCNGHLSSLE QGILANSGSE KCNGDTLATS SNGNCYAVNG DAQSRNDSLD ADKGDVPFVS HGFEPRPYKV LSDSNNNCSR
801: TSNGKPKAYQ GDMSFLPRGF LGRSSSRGIS VKADDGLPFS NGASSSFGNG KSKSSNHSSS IGGLSPGFLT RHRRESIALG TSSDISMDTK SNGAAVMPEG
901: AEEMVSDCTT NGSSFQIRAS DHLDENGLAI LHTKSNSCGQ ENDSNGTPSM NHDGSEHGLR RRITSKFFEQ DGIDAQ

Best Arabidopsis Sequence Match ( AT2G24640.1 )
(BLAST)

001: MHEVGLFVDL NSFTQLILTL FFVSIGLLYF VKRTAAKYFE VGGGSGGFDR DHRRDFMVSD TAECSVCGKA TTKKCSRCKS VRYCSAACQT SDWKSGHKLK
101: CKGFRSTDSS PVRRDDIDFE ASLFGNRSAS KKTRIALVPQ QSQSKATLKP TDVLFPYESF VRYYNWDRPI MAPCGLTNCG NSCFANVVLQ CLSWTRPLVA
201: YLLERGHKRE CRRNDWCFLC EFENHLDRAN YSRFPFSPMN IISRLPNIGG NLGYGRQEDA HELMRFAIDM MQSVCLDEFG GEKVVPPRAQ ETTLIQYIFG
301: GLLQSQVQCT ACSNVSDQYE NMMDLTVEIH GDAVSLEECL DQFTAKEWLQ GDNLYKCDRC DDYVKACKRL SIRCAPNILT IALKRFQGGR FGKLNKRISF
401: PETFDLGPYM SGGGEGSDVY KLYAVIVHLD MLNASFFGHY ICYVKDFRGN WYRIDDSEVE KVELEDVLSQ RAYMLLYSRV QPRPSNLRSE ESQDEKKTDT
501: LNTESNQDGS VESSGVGTND TSVSSLCNGI ISHSEDPEYE KESSLSASVP VSEEGKEVDV KVDTVDSESN RSIDMEHDSG TDHQEEEANG KEDPTVENLA
601: VDSSCLDITT PSPSAATEFI PQENERSDTE SKPLEKEHSD TESNKPLEKE HLDSESKPLE KEHSDTEMID AQ

Arabidopsis Description

UBP19Ubiquitin carboxyl-terminal hydrolase 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJA1]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.