Factsheet for Bra032080.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 5
vacuole 5
plasma membrane 4
golgi 4
nucleus 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, vacuole
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45587	Canola	endoplasmic reticulum, vacuole	98.89	98.58
CDY20330	Canola	vacuole	96.83	95.02
Bra007837.1-P	Field mustard	nucleus	66.24	81.96
AT2G24640.1	Thale cress	endoplasmic reticulum, vacuole	82.88	77.83
Bra011290.1-P	Field mustard	vacuole	63.55	65.52
PGSC0003DMT400076065	Potato	endoplasmic reticulum	35.18	63.79
GSMUA_Achr7P05090_001	Banana	vacuole	44.06	59.53
KRH15706	Soybean	golgi, plasma membrane, vacuole	53.88	46.64
KRH05330	Soybean	golgi, plasma membrane	53.41	45.73
KRH61621	Soybean	golgi	53.72	45.69
KRH52289	Soybean	golgi	52.77	45.37
Solyc08g069050.2.1	Tomato	extracellular	53.72	43.63
Solyc12g096430.1.1	Tomato	nucleus, plastid	42.95	43.57
VIT_04s0069g00760.t01	Wine grape	nucleus	50.4	36.81
Zm00001d036707_P006	Maize	plasma membrane	48.02	31.63
KXG20513	Sorghum	golgi, plasma membrane	47.07	30.43
Os06t0654000-01	Rice	cytosol, nucleus	44.06	29.45
Bra024386.1-P	Field mustard	golgi	34.39	28.29
TraesCS7D01G485600.1	Wheat	golgi, plasma membrane	45.64	27.04
TraesCS7A01G498400.1	Wheat	extracellular, golgi, plasma membrane	45.32	26.98
TraesCS7B01G405400.1	Wheat	golgi, plasma membrane	45.96	26.98
HORVU7Hr1G111430.5	Barley	cytosol, nucleus	44.53	26.74
GSMUA_Achr1P10260_001	Banana	endoplasmic reticulum, plasma membrane	47.54	26.53
Bra026003.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	36.61	26.34
Bra038533.1-P	Field mustard	nucleus	14.74	26.2
Bra016618.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	36.77	26.01
Bra010647.1-P	Field mustard	nucleus	14.42	24.46
Bra024037.1-P	Field mustard	cytosol	15.21	24.0
Bra013814.1-P	Field mustard	golgi	34.55	21.37
Bra019219.1-P	Field mustard	golgi	34.23	21.34
Bra011823.1-P	Field mustard	nucleus	14.42	20.63
Bra028566.1-P	Field mustard	cytosol	16.16	20.24
Bra027341.1-P	Field mustard	mitochondrion	20.29	18.63
Bra010268.1-P	Field mustard	cytosol	16.32	18.1
Bra021031.1-P	Field mustard	nucleus	18.07	17.76
Bra011230.1-P	Field mustard	endoplasmic reticulum, vacuole	16.16	17.29
Bra006790.1-P	Field mustard	nucleus, plastid	21.71	16.49
Bra022060.1-P	Field mustard	nucleus	17.27	16.39
Bra025000.1-P	Field mustard	endoplasmic reticulum	18.38	15.91
Bra020400.1-P	Field mustard	nucleus	20.6	15.61
Bra002683.1-P	Field mustard	nucleus	21.87	14.05

Protein Annotations

MapMan:19.2.3.1.1.7	Gene3D:3.30.60.180	Gene3D:3.90.70.10	EnsemblPlantsGene:Bra032080	EnsemblPlants:Bra032080.1	EnsemblPlants:Bra032080.1-P
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0006464	GO:GO:0006511
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016579	GO:GO:0016787	GO:GO:0019538	GO:GO:0036459	GO:GO:0046872	InterPro:IPR002893
InterPro:IPR028889	UniProt:M4ETE9	PFAM:PF00443	PFAM:PF01753	ScanProsite:PS00972	ScanProsite:PS01360
PFscan:PS50235	PFscan:PS50865	PANTHER:PTHR45499	InterPro:Papain_like_cys_pep_sf	InterPro:Peptidase_C19_UCH	SUPFAM:SSF144232
SUPFAM:SSF54001	TMHMM:TMhelix	UniParc:UPI0002544B69	InterPro:USP_CS	InterPro:USP_dom	InterPro:Znf_MYND
SEG:seg	:	:	:	:	:

Description

AT2G24640 (E=9e-249) UBP19 | UBP19 (UBIQUITIN-SPECIFIC PROTEASE 19); cysteine-type endopeptidase/ ubiquitin thiolesterase

Coordinates

chrA04:-:11017979..11021354

Molecular Weight (calculated)

70059.2 Da

IEP (calculated)

4.716

GRAVY (calculated)

-0.390

Length

631 amino acids

Sequence
(BLAST)

001: MHQVGLTWDL NSFTQLVLTL FLLSFALLFF VKRTAAKYFE VGGGGGSDSD LRRDFMVPDA SECSVCGNLT TKKCSRCKSV RYCSAECQRS DWNAGHKLKC
101: KVVKSTTGLK ASLFGNGSAS KTALSPKLSQ IIKPGDVLFP YETFVQYFNW DKPGLAPCGL TNCGNSCFAN VVLQCLSWTR PLVAYLLERG HKRECRRNDW
201: CFLCEFETHL ERANISRFPF SPMNIISRLP NIGGNLGYGR QEDAHELMRF VIDMMQSVCL DEFGGEKVVP PRAQETTLIQ YIFGGLLQSQ VQCTVCSNVS
301: DQYENMMDLT VEIHGDAVSL EECLDQFTAK EWLQGDNLYK CDRCNDYVKA CKRLSIRSAP NILTVALKRF QGGRFGKLNK RISFPETFDL GPYMSCCGGE
401: GSDVYKLYAV IVHLDMLNAS FFGHYICYVK DFRGDWYRID DSEVEKVELE DVLSQRAYML LYSRVQARPS SLRSEEVQDE KKTDTVDTEA SEDGSVESSG
501: AGTNGASVSS MCNGIISHSE NPECKKDSSS SASSTVSEVA ERVDTVDSES NPSIDMEHDS GTDHQEEAAA NGKEDSTVEN PAVDSPCSDI TTTSLSATTE
601: SKHIEKEDSD TEMIDNAESI QKDGEDKQGS F

Best Arabidopsis Sequence Match ( AT2G24640.1 )
(BLAST)

001: MHEVGLFVDL NSFTQLILTL FFVSIGLLYF VKRTAAKYFE VGGGSGGFDR DHRRDFMVSD TAECSVCGKA TTKKCSRCKS VRYCSAACQT SDWKSGHKLK
101: CKGFRSTDSS PVRRDDIDFE ASLFGNRSAS KKTRIALVPQ QSQSKATLKP TDVLFPYESF VRYYNWDRPI MAPCGLTNCG NSCFANVVLQ CLSWTRPLVA
201: YLLERGHKRE CRRNDWCFLC EFENHLDRAN YSRFPFSPMN IISRLPNIGG NLGYGRQEDA HELMRFAIDM MQSVCLDEFG GEKVVPPRAQ ETTLIQYIFG
301: GLLQSQVQCT ACSNVSDQYE NMMDLTVEIH GDAVSLEECL DQFTAKEWLQ GDNLYKCDRC DDYVKACKRL SIRCAPNILT IALKRFQGGR FGKLNKRISF
401: PETFDLGPYM SGGGEGSDVY KLYAVIVHLD MLNASFFGHY ICYVKDFRGN WYRIDDSEVE KVELEDVLSQ RAYMLLYSRV QPRPSNLRSE ESQDEKKTDT
501: LNTESNQDGS VESSGVGTND TSVSSLCNGI ISHSEDPEYE KESSLSASVP VSEEGKEVDV KVDTVDSESN RSIDMEHDSG TDHQEEEANG KEDPTVENLA
601: VDSSCLDITT PSPSAATEFI PQENERSDTE SKPLEKEHSD TESNKPLEKE HLDSESKPLE KEHSDTEMID AQ

Arabidopsis Description

UBP19Ubiquitin carboxyl-terminal hydrolase 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJA1]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.