CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 7
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH52289	Soybean	golgi	88.81	89.78
KRH15706	Soybean	golgi, plasma membrane, vacuole	65.23	66.39
KRH05330	Soybean	golgi, plasma membrane	64.69	65.13
GSMUA_Achr7P05090_001	Banana	vacuole	40.3	64.03
PGSC0003DMT400076065	Potato	endoplasmic reticulum	29.78	63.51
AT4G31670.1	Thale cress	endoplasmic reticulum, golgi	45.96	54.04
Bra032080.1-P	Field mustard	endoplasmic reticulum, vacuole	45.69	53.72
CDY45587	Canola	endoplasmic reticulum, vacuole	45.82	53.71
CDY20330	Canola	vacuole	46.23	53.34
CDX68773	Canola	nucleus, plasma membrane	43.8	52.93
CDX75188	Canola	vacuole	43.53	52.86
Bra011290.1-P	Field mustard	vacuole	43.53	52.78
Bra007837.1-P	Field mustard	nucleus	36.12	52.55
CDY34761	Canola	endoplasmic reticulum, vacuole	45.01	51.86
CDX76801	Canola	endoplasmic reticulum, golgi, vacuole	45.15	51.46
AT2G24640.1	Thale cress	endoplasmic reticulum, vacuole	45.69	50.45
Solyc08g069050.2.1	Tomato	extracellular	49.73	47.49
Solyc12g096430.1.1	Tomato	nucleus, plastid	37.06	44.21
VIT_04s0069g00760.t01	Wine grape	nucleus	48.38	41.55
Zm00001d036707_P006	Maize	plasma membrane	42.72	33.09
KXG20513	Sorghum	golgi, plasma membrane	43.4	32.99
Os06t0654000-01	Rice	cytosol, nucleus	41.91	32.94
TraesCS7D01G485600.1	Wheat	golgi, plasma membrane	44.07	30.7
HORVU7Hr1G111430.5	Barley	cytosol, nucleus	43.4	30.64
TraesCS7B01G405400.1	Wheat	golgi, plasma membrane	44.34	30.6
TraesCS7A01G498400.1	Wheat	extracellular, golgi, plasma membrane	43.67	30.57
GSMUA_Achr1P10260_001	Banana	endoplasmic reticulum, plasma membrane	46.36	30.42
KRH43175	Soybean	nucleus	13.48	27.1
KRH59329	Soybean	nucleus	13.48	27.1
KRG97572	Soybean	nucleus	13.34	26.83
KRH31299	Soybean	nucleus	13.34	26.83
KRH72298	Soybean	cytosol, plastid	18.06	26.38
KRH74502	Soybean	golgi, plasma membrane, vacuole	32.48	26.0
KRH69660	Soybean	golgi	32.75	25.91
KRH13569	Soybean	endoplasmic reticulum, plasma membrane	33.15	24.87
KRH21804	Soybean	endoplasmic reticulum, plasma membrane	33.02	24.75
KRH72452	Soybean	golgi, plasma membrane	32.08	22.97
KRH52893	Soybean	extracellular, golgi, vacuole	26.95	22.52
KRH16837	Soybean	golgi	31.4	22.3
KRH43852	Soybean	nucleus	18.19	21.06
KRH62182	Soybean	golgi, vacuole	31.94	20.83
KRH13611	Soybean	nucleus	18.19	20.71
KRH05289	Soybean	nucleus	14.29	19.1
KRH15753	Soybean	nucleus	13.88	18.59
KRH39864	Soybean	cytosol	13.21	18.42
KRH20191	Soybean	plastid	14.56	18.18
KRH03615	Soybean	cytosol	14.42	18.07
KRH23933	Soybean	cytosol	13.07	17.93
KRH74417	Soybean	nucleus	16.44	16.87
KRH03060	Soybean	nucleus	19.95	16.39
KRH39541	Soybean	nucleus	16.17	16.24

Protein Annotations

EntrezGene:100810577	MapMan:19.2.3.1.1.7	Gene3D:3.30.60.180	Gene3D:3.90.70.10	EMBL:ACUP02002178	EnsemblPlantsGene:GLYMA_04G058300
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0006464	GO:GO:0006511
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016579	GO:GO:0016787	GO:GO:0019538	GO:GO:0036459	GO:GO:0046872	UniProt:I1JU40
InterPro:IPR002893	InterPro:IPR028889	EnsemblPlants:KRH61621	ProteinID:KRH61621	ProteinID:KRH61621.1	PFAM:PF00443
PFAM:PF01753	ScanProsite:PS00972	PFscan:PS50235	PFscan:PS50865	PANTHER:PTHR45499	InterPro:Papain_like_cys_pep_sf
InterPro:Peptidase_C19_UCH	SUPFAM:SSF144232	SUPFAM:SSF54001	TMHMM:TMhelix	UniParc:UPI000233980E	InterPro:USP_CS
InterPro:USP_dom	InterPro:Znf_MYND	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:4776379..4782071

Molecular Weight (calculated)

82730.7 Da

IEP (calculated)

5.217

GRAVY (calculated)

-0.338

Length

742 amino acids

Sequence
(BLAST)

001: MLLSGGVSDL KWILQFVFYA FVLAIGLHAL LKNTASKYFD LDATFHAHAI PGLLMDHSLC AVCRNPANKK CSRCKSVRYC SQACQQMHWK SEHKVRCKEF
101: QGSSTSVMMN LAQTEVTNRV FKASSAAVNR STCTSSIALI PECGRGTSRT IKQPKSVLFP YDEFVKLFNW DKPGFPPCGL LNCGNSCFAN VVLQCLSFTR
201: PLIAFLLEKG HHRECCHNDW CFLCEFETHV EKVRLSSQAF SPMNILSRLP NISGTLGYGR QEDAHEFMRF SIDAMQSVCL DEFGGEKVVP PRNQETTLIQ
301: HIFGGHLQSE VICTECEKNS NQYENMMDLT VEIHGDAASL EECLDQFTAK EWLHGDNMYK CDGCKGYVKA WKRLTVKQAP NILTIALKRF QSGRFGKLNK
401: RVTFPETLDL SPYMSEVGDG SDIYKLYAVV VHIDMLNASF FGHYICYIKD FCGNWYRIDD WKVSSVELEE VLSQGAYMLL YSRVNARPSG LQSIESSETA
501: EVQTIKSEVP PGPTEQAECL SDMKTETYSG GCEAFPFDSS LELKVSCCEN VSLTEMNSEV KREQFKDVDI IDVANESFCN GVESSYMHDS EAVKDSGDID
601: SNGSKTCSSS LEEISVCMEE QDDSDMAKSS PSSCLPDGFS SVDKDSSVSV DYRNTRKDSD SDHKDVVKCK VTSNGFANYS NGYASANKYD DVPVEDGDGC
701: FSTETPSAKM HQLKERLASE NAEVDKGNGV KRVEISGNKL II

Best Arabidopsis Sequence Match ( AT2G24640.1 )
(BLAST)

001: MHEVGLFVDL NSFTQLILTL FFVSIGLLYF VKRTAAKYFE VGGGSGGFDR DHRRDFMVSD TAECSVCGKA TTKKCSRCKS VRYCSAACQT SDWKSGHKLK
101: CKGFRSTDSS PVRRDDIDFE ASLFGNRSAS KKTRIALVPQ QSQSKATLKP TDVLFPYESF VRYYNWDRPI MAPCGLTNCG NSCFANVVLQ CLSWTRPLVA
201: YLLERGHKRE CRRNDWCFLC EFENHLDRAN YSRFPFSPMN IISRLPNIGG NLGYGRQEDA HELMRFAIDM MQSVCLDEFG GEKVVPPRAQ ETTLIQYIFG
301: GLLQSQVQCT ACSNVSDQYE NMMDLTVEIH GDAVSLEECL DQFTAKEWLQ GDNLYKCDRC DDYVKACKRL SIRCAPNILT IALKRFQGGR FGKLNKRISF
401: PETFDLGPYM SGGGEGSDVY KLYAVIVHLD MLNASFFGHY ICYVKDFRGN WYRIDDSEVE KVELEDVLSQ RAYMLLYSRV QPRPSNLRSE ESQDEKKTDT
501: LNTESNQDGS VESSGVGTND TSVSSLCNGI ISHSEDPEYE KESSLSASVP VSEEGKEVDV KVDTVDSESN RSIDMEHDSG TDHQEEEANG KEDPTVENLA
601: VDSSCLDITT PSPSAATEFI PQENERSDTE SKPLEKEHSD TESNKPLEKE HLDSESKPLE KEHSDTEMID AQ

Arabidopsis Description

UBP19Ubiquitin carboxyl-terminal hydrolase 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJA1]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.