Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 4
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007837.1-P | Field mustard | nucleus | 79.04 | 99.8 |
| CDX76801 | Canola | endoplasmic reticulum, golgi, vacuole | 95.65 | 94.62 |
| CDY45587 | Canola | endoplasmic reticulum, vacuole | 82.61 | 84.04 |
| CDY20330 | Canola | vacuole | 83.39 | 83.51 |
| AT2G24640.1 | Thale cress | endoplasmic reticulum, vacuole | 81.68 | 78.27 |
| CDX68773 | Canola | nucleus, plasma membrane | 63.98 | 67.1 |
| CDX75188 | Canola | vacuole | 62.58 | 65.96 |
| PGSC0003DMT400076065 | Potato | endoplasmic reticulum | 34.32 | 63.51 |
| GSMUA_Achr7P05090_001 | Banana | vacuole | 43.01 | 59.31 |
| KRH15706 | Soybean | golgi, plasma membrane, vacuole | 53.26 | 47.05 |
| KRH05330 | Soybean | golgi, plasma membrane | 52.8 | 46.13 |
| KRH61621 | Soybean | golgi | 51.86 | 45.01 |
| KRH52289 | Soybean | golgi | 50.78 | 44.55 |
| Solyc12g096430.1.1 | Tomato | nucleus, plastid | 41.93 | 43.41 |
| Solyc08g069050.2.1 | Tomato | extracellular | 51.86 | 42.99 |
| VIT_04s0069g00760.t01 | Wine grape | nucleus | 48.45 | 36.11 |
| Zm00001d036707_P006 | Maize | plasma membrane | 45.96 | 30.9 |
| KXG20513 | Sorghum | golgi, plasma membrane | 45.96 | 30.33 |
| CDY08792 | Canola | vacuole | 33.85 | 29.11 |
| Os06t0654000-01 | Rice | cytosol, nucleus | 42.55 | 29.03 |
| CDY14564 | Canola | golgi | 34.32 | 29.0 |
| CDX96790 | Canola | nucleus | 34.78 | 26.83 |
| CDX83925 | Canola | nucleus | 35.09 | 26.68 |
| CDY65125 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 36.34 | 26.68 |
| HORVU7Hr1G111430.5 | Barley | cytosol, nucleus | 43.48 | 26.64 |
| CDY48465 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 36.18 | 26.6 |
| TraesCS7D01G485600.1 | Wheat | golgi, plasma membrane | 43.94 | 26.57 |
| TraesCS7B01G405400.1 | Wheat | golgi, plasma membrane | 44.25 | 26.51 |
| TraesCS7A01G498400.1 | Wheat | extracellular, golgi, plasma membrane | 43.63 | 26.51 |
| GSMUA_Achr1P10260_001 | Banana | endoplasmic reticulum, plasma membrane | 45.96 | 26.17 |
| CDX76934 | Canola | nucleus | 14.29 | 25.99 |
| CDX72275 | Canola | cytosol | 14.91 | 25.95 |
| CDY13770 | Canola | nucleus | 14.29 | 25.84 |
| CDY68864 | Canola | nucleus | 14.44 | 25.0 |
| CDX69375 | Canola | nucleus | 14.29 | 24.8 |
| CDY63898 | Canola | nucleus | 14.29 | 23.12 |
| CDY11021 | Canola | golgi | 34.78 | 22.2 |
| CDX92643 | Canola | golgi | 34.63 | 22.01 |
| CDY03441 | Canola | golgi | 33.7 | 21.42 |
| CDY34291 | Canola | golgi | 33.7 | 21.27 |
| CDX75770 | Canola | mitochondrion, nucleus | 19.88 | 19.28 |
| CDY68683 | Canola | endoplasmic reticulum, vacuole | 14.44 | 19.1 |
| CDY23262 | Canola | nucleus | 15.99 | 18.83 |
| CDX98449 | Canola | mitochondrion | 20.5 | 18.75 |
| CDX97571 | Canola | mitochondrion | 20.34 | 18.5 |
| CDX85744 | Canola | cytosol | 16.15 | 17.87 |
| CDY40119 | Canola | nucleus | 16.15 | 17.81 |
| CDY36465 | Canola | cytosol | 16.15 | 17.72 |
| CDY28224 | Canola | endoplasmic reticulum, vacuole | 15.99 | 17.46 |
| CDX68701 | Canola | endoplasmic reticulum, extracellular | 15.99 | 17.25 |
| CDX76553 | Canola | cytosol | 17.08 | 17.13 |
| CDX88651 | Canola | nucleus, plastid | 21.43 | 16.75 |
| CDX87681 | Canola | nucleus | 16.3 | 16.67 |
| CDY32735 | Canola | nucleus | 20.65 | 16.6 |
| CDY37145 | Canola | cytosol | 17.08 | 16.52 |
| CDY11838 | Canola | nucleus, plastid | 20.96 | 16.48 |
| CDY02782 | Canola | nucleus | 20.5 | 16.48 |
| CDY55010 | Canola | nucleus | 21.27 | 16.12 |
| CDY58499 | Canola | endoplasmic reticulum | 17.86 | 15.95 |
| CDX77686 | Canola | endoplasmic reticulum | 18.63 | 15.89 |
| CDY57464 | Canola | nucleus | 20.81 | 15.8 |
| CDY50263 | Canola | cytosol | 6.52 | 15.5 |
| CDX87682 | Canola | cytosol | 0.16 | 3.03 |
Protein Annotations
| MapMan:19.2.3.1.1.7 | Gene3D:3.30.60.180 | Gene3D:3.90.70.10 | GO:A0A078HAN2 | UniProt:A0A078HAN2 | EnsemblPlants:CDY34761 |
| ProteinID:CDY34761 | ProteinID:CDY34761.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0006464 | GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016579 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0036459 |
| GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00057301001 | InterPro:IPR002893 | InterPro:IPR028889 | PFAM:PF00443 | PFAM:PF01753 |
| ScanProsite:PS00972 | ScanProsite:PS01360 | PFscan:PS50235 | PFscan:PS50865 | PANTHER:PTHR45499 | InterPro:Papain_like_cys_pep_sf |
| InterPro:Peptidase_C19_UCH | SUPFAM:SSF144232 | SUPFAM:SSF54001 | TMHMM:TMhelix | UniParc:UPI0004EE732C | InterPro:USP_CS |
| InterPro:USP_dom | InterPro:Znf_MYND | SEG:seg | : | : | : |
Description
BnaA09g41280DBnaA09g41280D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HAN2]
Coordinates
chrLK032341:+:129303..133152
Molecular Weight (calculated)
71341.5 Da
IEP (calculated)
4.950
GRAVY (calculated)
-0.421
Length
644 amino acids
Sequence
(BLAST)
(BLAST)
001: MHEVGSTWDL NFFTQLVLTL LFLSLGLLFF VKQTAAKYFE VGASGGFHRR DFMVPDAAAE CSVCGKLSTK KCSRCKSVRY CSAECQKSDW NSGHNRQCKV
101: FKSSDSSPVR KDDLGFKASL FGSRSASKAA LTSKLSQSKA VVKPGDVLFP YETFVNYFNW DKPTLAPCGL TNCGNSCFAN VVLQCLSWTR PLVAYLLERG
201: HKRECKRNDW CFFCEFETHL ERANMSRFPF SPMNIISRLP NIGGNLGYGR QEDAHELMRF VIDMMQSVCL DEFGGEKAVP PRAQETTLIQ HIFGGLLQSQ
301: VKCTVCSNVS DQYENMMDLT VEIHGDAVSL EECLDQFTAK EWLQGDNLYK CDRCNDYVKA CKRLSIRSAP NILTIALKRF QGGRFGKLNK RIGFPETFDL
401: GPYTSGGGEG SDVYNLYAVI VHLDMLNASF FGHYICYVKD LRGDWYRIDD SEVEKVELED VLSQRAYMLL YSRVQTRPSS LRPEEVQDEK KTDTLNTESS
501: QDGSVESSGV GPNVSSLCNG ISISHSEGSS SSSLSSSVSV SEKEGEVAER VDTVDSESNP SVDMEHDSGT DHQEVVNGKE HPTVEDPAVD SSDNTASSPS
601: AATENPTVED PACSDITTSS PSAAIESKHK EKEDSDTKMI DDAQ
101: FKSSDSSPVR KDDLGFKASL FGSRSASKAA LTSKLSQSKA VVKPGDVLFP YETFVNYFNW DKPTLAPCGL TNCGNSCFAN VVLQCLSWTR PLVAYLLERG
201: HKRECKRNDW CFFCEFETHL ERANMSRFPF SPMNIISRLP NIGGNLGYGR QEDAHELMRF VIDMMQSVCL DEFGGEKAVP PRAQETTLIQ HIFGGLLQSQ
301: VKCTVCSNVS DQYENMMDLT VEIHGDAVSL EECLDQFTAK EWLQGDNLYK CDRCNDYVKA CKRLSIRSAP NILTIALKRF QGGRFGKLNK RIGFPETFDL
401: GPYTSGGGEG SDVYNLYAVI VHLDMLNASF FGHYICYVKD LRGDWYRIDD SEVEKVELED VLSQRAYMLL YSRVQTRPSS LRPEEVQDEK KTDTLNTESS
501: QDGSVESSGV GPNVSSLCNG ISISHSEGSS SSSLSSSVSV SEKEGEVAER VDTVDSESNP SVDMEHDSGT DHQEVVNGKE HPTVEDPAVD SSDNTASSPS
601: AATENPTVED PACSDITTSS PSAAIESKHK EKEDSDTKMI DDAQ
001: MHEVGLFVDL NSFTQLILTL FFVSIGLLYF VKRTAAKYFE VGGGSGGFDR DHRRDFMVSD TAECSVCGKA TTKKCSRCKS VRYCSAACQT SDWKSGHKLK
101: CKGFRSTDSS PVRRDDIDFE ASLFGNRSAS KKTRIALVPQ QSQSKATLKP TDVLFPYESF VRYYNWDRPI MAPCGLTNCG NSCFANVVLQ CLSWTRPLVA
201: YLLERGHKRE CRRNDWCFLC EFENHLDRAN YSRFPFSPMN IISRLPNIGG NLGYGRQEDA HELMRFAIDM MQSVCLDEFG GEKVVPPRAQ ETTLIQYIFG
301: GLLQSQVQCT ACSNVSDQYE NMMDLTVEIH GDAVSLEECL DQFTAKEWLQ GDNLYKCDRC DDYVKACKRL SIRCAPNILT IALKRFQGGR FGKLNKRISF
401: PETFDLGPYM SGGGEGSDVY KLYAVIVHLD MLNASFFGHY ICYVKDFRGN WYRIDDSEVE KVELEDVLSQ RAYMLLYSRV QPRPSNLRSE ESQDEKKTDT
501: LNTESNQDGS VESSGVGTND TSVSSLCNGI ISHSEDPEYE KESSLSASVP VSEEGKEVDV KVDTVDSESN RSIDMEHDSG TDHQEEEANG KEDPTVENLA
601: VDSSCLDITT PSPSAATEFI PQENERSDTE SKPLEKEHSD TESNKPLEKE HLDSESKPLE KEHSDTEMID AQ
101: CKGFRSTDSS PVRRDDIDFE ASLFGNRSAS KKTRIALVPQ QSQSKATLKP TDVLFPYESF VRYYNWDRPI MAPCGLTNCG NSCFANVVLQ CLSWTRPLVA
201: YLLERGHKRE CRRNDWCFLC EFENHLDRAN YSRFPFSPMN IISRLPNIGG NLGYGRQEDA HELMRFAIDM MQSVCLDEFG GEKVVPPRAQ ETTLIQYIFG
301: GLLQSQVQCT ACSNVSDQYE NMMDLTVEIH GDAVSLEECL DQFTAKEWLQ GDNLYKCDRC DDYVKACKRL SIRCAPNILT IALKRFQGGR FGKLNKRISF
401: PETFDLGPYM SGGGEGSDVY KLYAVIVHLD MLNASFFGHY ICYVKDFRGN WYRIDDSEVE KVELEDVLSQ RAYMLLYSRV QPRPSNLRSE ESQDEKKTDT
501: LNTESNQDGS VESSGVGTND TSVSSLCNGI ISHSEDPEYE KESSLSASVP VSEEGKEVDV KVDTVDSESN RSIDMEHDSG TDHQEEEANG KEDPTVENLA
601: VDSSCLDITT PSPSAATEFI PQENERSDTE SKPLEKEHSD TESNKPLEKE HLDSESKPLE KEHSDTEMID AQ
Arabidopsis Description
UBP19Ubiquitin carboxyl-terminal hydrolase 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJA1]
SUBAcon: [endoplasmic reticulum,vacuole]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.