Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 7
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra013814.1-P | Field mustard | golgi | 99.51 | 99.51 |
| CDY03441 | Canola | golgi | 94.02 | 94.67 |
| CDY11021 | Canola | golgi | 80.2 | 81.07 |
| CDX92643 | Canola | golgi | 80.49 | 81.05 |
| AT4G24560.1 | Thale cress | extracellular, golgi | 76.08 | 76.98 |
| KRH72452 | Soybean | golgi, plasma membrane | 41.96 | 41.31 |
| KRH16837 | Soybean | golgi | 41.57 | 40.57 |
| KRH52893 | Soybean | extracellular, golgi, vacuole | 35.29 | 40.54 |
| KRH62182 | Soybean | golgi, vacuole | 44.71 | 40.07 |
| GSMUA_Achr7P19020_001 | Banana | endoplasmic reticulum, golgi | 15.1 | 39.9 |
| CDY08792 | Canola | vacuole | 28.82 | 39.25 |
| GSMUA_Achr10P... | Banana | golgi | 17.25 | 39.11 |
| CDY14564 | Canola | golgi | 28.92 | 38.71 |
| GSMUA_Achr5P22990_001 | Banana | vacuole | 34.12 | 38.71 |
| VIT_18s0001g07370.t01 | Wine grape | golgi, vacuole | 45.98 | 38.29 |
| GSMUA_Achr10P... | Banana | nucleus | 14.31 | 35.96 |
| CDX68773 | Canola | nucleus, plasma membrane | 21.27 | 35.34 |
| CDX75188 | Canola | vacuole | 21.08 | 35.19 |
| GSMUA_Achr7P19010_001 | Banana | nucleus | 15.69 | 34.78 |
| CDY45587 | Canola | endoplasmic reticulum, vacuole | 21.27 | 34.28 |
| HORVU5Hr1G069620.20 | Barley | cytosol, nucleus | 24.51 | 33.92 |
| CDY20330 | Canola | vacuole | 21.27 | 33.75 |
| Zm00001d050489_P001 | Maize | nucleus | 15.1 | 33.7 |
| CDY34761 | Canola | endoplasmic reticulum, vacuole | 21.27 | 33.7 |
| CDX76801 | Canola | endoplasmic reticulum, golgi, vacuole | 21.37 | 33.49 |
| GSMUA_AchrUn_... | Banana | golgi, vacuole | 31.76 | 31.98 |
| Os08t0478500-01 | Rice | plastid | 30.59 | 31.9 |
| Os09t0464400-00 | Rice | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 28.43 | 31.25 |
| TraesCS5D01G252600.2 | Wheat | endoplasmic reticulum, vacuole | 27.55 | 31.05 |
| TraesCS5B01G243400.1 | Wheat | vacuole | 27.45 | 30.57 |
| OQU80649 | Sorghum | nucleus | 24.12 | 30.52 |
| TraesCS7A01G282200.4 | Wheat | plastid | 29.31 | 30.23 |
| TraesCS7B01G179000.2 | Wheat | plastid | 29.22 | 30.01 |
| TraesCS7D01G280800.4 | Wheat | plastid | 29.02 | 29.84 |
| Zm00001d020769_P005 | Maize | nucleus | 25.0 | 29.79 |
| OQU89635 | Sorghum | vacuole | 25.98 | 29.06 |
| TraesCS5A01G246000.3 | Wheat | vacuole | 27.35 | 29.0 |
| CDX96790 | Canola | nucleus | 23.04 | 28.14 |
| CDY65125 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 24.02 | 27.94 |
| CDX83925 | Canola | nucleus | 23.14 | 27.86 |
| CDY48465 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 23.92 | 27.85 |
| HORVU7Hr1G064340.3 | Barley | endoplasmic reticulum | 26.37 | 27.09 |
| CDY13770 | Canola | nucleus | 9.22 | 26.4 |
| CDX76934 | Canola | nucleus | 8.92 | 25.71 |
| CDX72275 | Canola | cytosol | 9.31 | 25.68 |
| CDX69375 | Canola | nucleus | 9.22 | 25.34 |
| CDY68864 | Canola | nucleus | 9.22 | 25.27 |
| CDY63898 | Canola | nucleus | 9.22 | 23.62 |
| CDY68683 | Canola | endoplasmic reticulum, vacuole | 9.8 | 20.53 |
| CDY23262 | Canola | nucleus | 10.69 | 19.93 |
| CDY40119 | Canola | nucleus | 11.37 | 19.86 |
| CDX85744 | Canola | cytosol | 11.27 | 19.76 |
| CDX87681 | Canola | nucleus | 11.86 | 19.21 |
| CDX97571 | Canola | mitochondrion | 13.14 | 18.93 |
| CDX98449 | Canola | mitochondrion | 12.94 | 18.75 |
| CDX76553 | Canola | cytosol | 11.67 | 18.54 |
| CDY36465 | Canola | cytosol | 10.59 | 18.4 |
| CDX75770 | Canola | mitochondrion, nucleus | 11.96 | 18.37 |
| CDY28224 | Canola | endoplasmic reticulum, vacuole | 10.59 | 18.31 |
| CDY37145 | Canola | cytosol | 11.86 | 18.17 |
| CDX68701 | Canola | endoplasmic reticulum, extracellular | 10.59 | 18.09 |
| CDY58499 | Canola | endoplasmic reticulum | 12.55 | 17.75 |
| CDX77686 | Canola | endoplasmic reticulum | 12.65 | 17.09 |
| CDY50263 | Canola | cytosol | 4.41 | 16.61 |
| CDY11838 | Canola | nucleus, plastid | 13.24 | 16.48 |
| CDX88651 | Canola | nucleus, plastid | 13.14 | 16.26 |
| CDY32735 | Canola | nucleus | 12.75 | 16.23 |
| CDY02782 | Canola | nucleus | 12.75 | 16.23 |
| CDY57464 | Canola | nucleus | 13.43 | 16.16 |
| CDY55010 | Canola | nucleus | 13.33 | 16.0 |
| CDX87682 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| MapMan:19.2.3.1.1.7 | Gene3D:3.30.60.180 | Gene3D:3.90.70.10 | GO:A0A078H949 | UniProt:A0A078H949 | EnsemblPlants:CDY34291 |
| ProteinID:CDY34291 | ProteinID:CDY34291.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0006464 | GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016579 | GO:GO:0016787 | GO:GO:0019538 |
| GO:GO:0036459 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00056324001 | InterPro:IPR002893 | InterPro:IPR028889 | PFAM:PF00443 |
| PFAM:PF01753 | ScanProsite:PS00972 | ScanProsite:PS01360 | PFscan:PS50235 | PFscan:PS50865 | PANTHER:PTHR45492 |
| InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C19_UCH | SUPFAM:SSF144232 | SUPFAM:SSF54001 | TMHMM:TMhelix | UniParc:UPI0004EEB27B |
| InterPro:USP_CS | InterPro:USP_dom | InterPro:Znf_MYND | SEG:seg | : | : |
Description
BnaA01g13940DBnaA01g13940D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H949]
Coordinates
chrLK032332:-:162953..167713
Molecular Weight (calculated)
111760.0 Da
IEP (calculated)
7.637
GRAVY (calculated)
-0.453
Length
1020 amino acids
Sequence
(BLAST)
(BLAST)
0001: MLLVLDLGLS SLVLVISLLA IPLVGFVVRR QWRLAALRRE EIRRLLIHAS EEAARVEREA SVEFSFAPVV ANSFYCPVCY CPALTRCSRC KAVRYCSGKC
0101: QIIHWRQGHK DECQPASITY NTDDEKSDSD LKFGEGNEGL TRDEAVLLHS EAATVPIREA IISEPARSSE DVSGESADNK DDLIDKEEAV SVAETSGSSF
0201: SGFSSSPRND SSDDTSLGEC LSSSDSEISE PLLDAHVSVA SEETCFSNID DVPSKPLSPK FVHLVESVDN LANMPKLNLL KPGGNAGQNQ RQSSSLLVPD
0301: RLPGSAHPKS ADPALVKSSD FWGTALGSAE CVIENRDSSK SGELGKSSLH VSFGSSRDTS AGKVSENRNF ISEETPRTAS GTPNFYDEVN NRKERTAKRS
0401: DEAEISLQSL SSIKAPLPLN PTGLSTVTLR KSKSTSTGSG VVLAPLKVAE VQLLASKTTK ARESPDVVKQ SAVGADSGRV IDHQKQNGVA VRRINSLNGK
0501: SGLKASVLKV VDQWTKPKSL AENEMAGRHG HKWLFSYELF VKLYTNKTEL QPCGLINSGN SCFANVVVQC LMFTPPLTTY FLQRYHSRAC PNKEQCFTCG
0601: FENLVLKATE GKSSLSPNGL LLQLQNIGIS LGNGKQEDAH EFLRFVVDTM QSLCIKASEY DMPKTRKLED TTLIGLTFGG YLRSKIKCMK CQEKSERREK
0701: MMDLTVEIDG DISTLEDALR RFTRTEILDG ENKYKCGSCK SYERAKKKLK ITEPPNVLTI ALKRFQSGKF GKLNKLVRFP ETLDLAPYVS GGSEKSHDYK
0801: LYGVIVHLDV MNAAFSGHYV CYIRNSQNKW YKADDNTVVT SDVERVLTKG AYMLFYARCS PMPPRLVVCN KTEASTNKKR SVPPPVPKAT VSRSVSTAGP
0901: VSSSNAPGGD RSGNIQSFYS SFQRLQRILE EDSSSDSSSL FDSNSDECSC STDSTSMDDF ADFIFGDHQG RAHGHSEAPS PTSSSSSPSP PFTRHSRLGD
1001: SSRYFPETCG ASRHHHRGER
0101: QIIHWRQGHK DECQPASITY NTDDEKSDSD LKFGEGNEGL TRDEAVLLHS EAATVPIREA IISEPARSSE DVSGESADNK DDLIDKEEAV SVAETSGSSF
0201: SGFSSSPRND SSDDTSLGEC LSSSDSEISE PLLDAHVSVA SEETCFSNID DVPSKPLSPK FVHLVESVDN LANMPKLNLL KPGGNAGQNQ RQSSSLLVPD
0301: RLPGSAHPKS ADPALVKSSD FWGTALGSAE CVIENRDSSK SGELGKSSLH VSFGSSRDTS AGKVSENRNF ISEETPRTAS GTPNFYDEVN NRKERTAKRS
0401: DEAEISLQSL SSIKAPLPLN PTGLSTVTLR KSKSTSTGSG VVLAPLKVAE VQLLASKTTK ARESPDVVKQ SAVGADSGRV IDHQKQNGVA VRRINSLNGK
0501: SGLKASVLKV VDQWTKPKSL AENEMAGRHG HKWLFSYELF VKLYTNKTEL QPCGLINSGN SCFANVVVQC LMFTPPLTTY FLQRYHSRAC PNKEQCFTCG
0601: FENLVLKATE GKSSLSPNGL LLQLQNIGIS LGNGKQEDAH EFLRFVVDTM QSLCIKASEY DMPKTRKLED TTLIGLTFGG YLRSKIKCMK CQEKSERREK
0701: MMDLTVEIDG DISTLEDALR RFTRTEILDG ENKYKCGSCK SYERAKKKLK ITEPPNVLTI ALKRFQSGKF GKLNKLVRFP ETLDLAPYVS GGSEKSHDYK
0801: LYGVIVHLDV MNAAFSGHYV CYIRNSQNKW YKADDNTVVT SDVERVLTKG AYMLFYARCS PMPPRLVVCN KTEASTNKKR SVPPPVPKAT VSRSVSTAGP
0901: VSSSNAPGGD RSGNIQSFYS SFQRLQRILE EDSSSDSSSL FDSNSDECSC STDSTSMDDF ADFIFGDHQG RAHGHSEAPS PTSSSSSPSP PFTRHSRLGD
1001: SSRYFPETCG ASRHHHRGER
0001: MLLVLDLGIS SLVLVVSLVL PLIGLFVRHK WRVAAQRREE IRRLLIHASE EAARAELEAS VEFSSVAVSN VFHCPVCYCL ATTRCSRCKA VRYCSGKCQI
0101: IHWRQGHKDE CHPASIVYDS EDESDSDLRL GEENGQNTPE ETLLVGPEPV TIPIGESLLS NRARSPEDGN GDIADNKDDL IDKEEAVSVA ETSGSSFSGF
0201: SSSPRNDSGD EISRCESFSS SESERSESLL DAHVSVEPED TCFSTIEDAP SKLLSPKFVH LVESVDNLAN LPKLSVHKPE DDAGQNQSQS RSLHSLVTDR
0301: HPVSADPSLK SSDFWGTALG SAERVSDSCV KSKSGRPGNS SLHFSFGSGS SRDTSAAKVS EQRSSILKEA PRGTGYISDG VNLRERNAKR FDEAEIALPI
0401: SSSTDALSPL DSSNLSHVTL PKSKSASSEN GSMLAPLKVG EVQLLASKAS NTKKCADLMK HSPLGAKSVR VLDHQKQNGA VVQHINSLHG RSGLKASVLK
0501: VVDQWTRPKS ENEMAGRHGH KGLFPYEVFA KLYTYKIEFQ PCGLINVGNS CFANVVFQCL MFTPPLTTYF LQQFHSRACT KKEQCFTCGF EKLVVKAKEE
0601: KSPLSPNGLL SQLQNIGIFL GNGKEEDAHE FLRFVVDTMQ SVCIKASEYD MTKSSKLEDT TLIGLTFGGY LRSKIKCMKC QVKSELREKM MDLTVEIDGD
0701: ISTLDDALRR FTRTEILDGE NKYRCGSCKS YERAKKKLKI TEPPNVLTIA LKRFQAGKFG KLNKLIRFPE TLDLAPYVSG GSEKSHDYKL YGVIVHLDVM
0801: NAAFSGHYVC YIRNQNKWYK ADDSTVVTSD VERILTKGAY MLFYARCTPT PPRLAVCTKT EASNKKSRVP LPKANEKSTI SRSVSTSSPE LSSNTPGGGR
0901: SGNIQSFYSS FQRLQKILEE DSASDSSSLF DSNSDECSCS TDSTSMDDFA DFIFGDHQGR AHGQSETPSP TSSSSSSSPP FTRRSPLSRS SPETYGTSRH
1001: QLPLGGER
0101: IHWRQGHKDE CHPASIVYDS EDESDSDLRL GEENGQNTPE ETLLVGPEPV TIPIGESLLS NRARSPEDGN GDIADNKDDL IDKEEAVSVA ETSGSSFSGF
0201: SSSPRNDSGD EISRCESFSS SESERSESLL DAHVSVEPED TCFSTIEDAP SKLLSPKFVH LVESVDNLAN LPKLSVHKPE DDAGQNQSQS RSLHSLVTDR
0301: HPVSADPSLK SSDFWGTALG SAERVSDSCV KSKSGRPGNS SLHFSFGSGS SRDTSAAKVS EQRSSILKEA PRGTGYISDG VNLRERNAKR FDEAEIALPI
0401: SSSTDALSPL DSSNLSHVTL PKSKSASSEN GSMLAPLKVG EVQLLASKAS NTKKCADLMK HSPLGAKSVR VLDHQKQNGA VVQHINSLHG RSGLKASVLK
0501: VVDQWTRPKS ENEMAGRHGH KGLFPYEVFA KLYTYKIEFQ PCGLINVGNS CFANVVFQCL MFTPPLTTYF LQQFHSRACT KKEQCFTCGF EKLVVKAKEE
0601: KSPLSPNGLL SQLQNIGIFL GNGKEEDAHE FLRFVVDTMQ SVCIKASEYD MTKSSKLEDT TLIGLTFGGY LRSKIKCMKC QVKSELREKM MDLTVEIDGD
0701: ISTLDDALRR FTRTEILDGE NKYRCGSCKS YERAKKKLKI TEPPNVLTIA LKRFQAGKFG KLNKLIRFPE TLDLAPYVSG GSEKSHDYKL YGVIVHLDVM
0801: NAAFSGHYVC YIRNQNKWYK ADDSTVVTSD VERILTKGAY MLFYARCTPT PPRLAVCTKT EASNKKSRVP LPKANEKSTI SRSVSTSSPE LSSNTPGGGR
0901: SGNIQSFYSS FQRLQKILEE DSASDSSSLF DSNSDECSCS TDSTSMDDFA DFIFGDHQGR AHGQSETPSP TSSSSSSSPP FTRRSPLSRS SPETYGTSRH
1001: QLPLGGER
Arabidopsis Description
UBP16Ubiquitin carboxyl-terminal hydrolase 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9SB51]
SUBAcon: [golgi,extracellular]
SUBAcon: [golgi,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.