Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY13770 | Canola | nucleus | 96.61 | 96.07 |
| AT2G22310.1 | Thale cress | nucleus | 89.55 | 86.85 |
| KRH59329 | Soybean | nucleus | 89.83 | 86.18 |
| CDX69375 | Canola | nucleus | 90.11 | 85.98 |
| KRH43175 | Soybean | nucleus | 89.55 | 85.91 |
| VIT_07s0141g00230.t01 | Wine grape | nucleus | 89.27 | 85.64 |
| CDY68864 | Canola | nucleus | 89.83 | 85.48 |
| GSMUA_Achr10P... | Banana | cytosol | 83.05 | 85.22 |
| KRG97572 | Soybean | nucleus | 87.85 | 84.28 |
| KRH31299 | Soybean | nucleus | 87.57 | 84.01 |
| GSMUA_Achr7P19160_001 | Banana | mitochondrion | 70.06 | 81.31 |
| PGSC0003DMT400032703 | Potato | nucleus | 83.9 | 81.15 |
| CDY63898 | Canola | nucleus | 89.55 | 79.65 |
| GSMUA_Achr8P14390_001 | Banana | cytosol | 82.2 | 79.51 |
| Zm00001d028005_P001 | Maize | nucleus | 81.92 | 79.23 |
| Os03t0190800-01 | Rice | cytosol | 81.07 | 78.42 |
| EER92723 | Sorghum | nucleus | 81.07 | 78.42 |
| HORVU4Hr1G078590.1 | Barley | cytosol | 81.07 | 78.42 |
| TraesCS4D01G304300.1 | Wheat | cytosol | 81.07 | 78.42 |
| TraesCS4B01G306100.1 | Wheat | cytosol | 81.07 | 78.42 |
| TraesCS4A01G406600.1 | Wheat | cytosol | 80.79 | 78.14 |
| TraesCS7D01G125700.1 | Wheat | nucleus | 80.51 | 77.87 |
| VIT_09s0070g00500.t01 | Wine grape | golgi, mitochondrion, nucleus, peroxisome | 77.4 | 76.54 |
| GSMUA_Achr10P... | Banana | nucleus | 80.51 | 76.2 |
| CDY68683 | Canola | endoplasmic reticulum, vacuole | 89.83 | 65.3 |
| CDY50263 | Canola | cytosol | 46.05 | 60.15 |
| CDX72275 | Canola | cytosol | 24.86 | 23.78 |
| CDY23262 | Canola | nucleus | 25.71 | 16.64 |
| CDY36465 | Canola | cytosol | 26.27 | 15.84 |
| CDY28224 | Canola | endoplasmic reticulum, vacuole | 26.27 | 15.76 |
| CDX75188 | Canola | vacuole | 26.84 | 15.55 |
| CDX68773 | Canola | nucleus, plasma membrane | 26.84 | 15.47 |
| CDX68701 | Canola | endoplasmic reticulum, extracellular | 25.99 | 15.41 |
| CDX87681 | Canola | nucleus | 27.4 | 15.4 |
| CDX76553 | Canola | cytosol | 27.4 | 15.11 |
| CDX85744 | Canola | cytosol | 24.29 | 14.78 |
| CDY40119 | Canola | nucleus | 24.29 | 14.73 |
| CDY45587 | Canola | endoplasmic reticulum, vacuole | 26.27 | 14.69 |
| CDY37145 | Canola | cytosol | 27.12 | 14.41 |
| CDY20330 | Canola | vacuole | 25.99 | 14.31 |
| CDY34761 | Canola | endoplasmic reticulum, vacuole | 25.99 | 14.29 |
| CDY58499 | Canola | endoplasmic reticulum | 29.1 | 14.29 |
| CDX76801 | Canola | endoplasmic reticulum, golgi, vacuole | 26.27 | 14.29 |
| CDX75770 | Canola | mitochondrion, nucleus | 26.55 | 14.16 |
| CDX77686 | Canola | endoplasmic reticulum | 28.53 | 13.38 |
| CDX98449 | Canola | mitochondrion | 26.55 | 13.35 |
| CDX97571 | Canola | mitochondrion | 26.55 | 13.28 |
| CDY08792 | Canola | vacuole | 27.4 | 12.95 |
| CDY14564 | Canola | golgi | 27.4 | 12.73 |
| CDY11838 | Canola | nucleus, plastid | 27.12 | 11.72 |
| CDX88651 | Canola | nucleus, plastid | 27.12 | 11.65 |
| CDY55010 | Canola | nucleus | 27.68 | 11.53 |
| CDY57464 | Canola | nucleus | 27.4 | 11.44 |
| CDY32735 | Canola | nucleus | 25.71 | 11.36 |
| CDY02782 | Canola | nucleus | 25.42 | 11.24 |
| CDX96790 | Canola | nucleus | 26.27 | 11.14 |
| CDX83925 | Canola | nucleus | 26.27 | 10.98 |
| CDY48465 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 26.84 | 10.84 |
| CDY65125 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 26.55 | 10.72 |
| CDY11021 | Canola | golgi | 26.55 | 9.32 |
| CDX92643 | Canola | golgi | 26.27 | 9.18 |
| CDY03441 | Canola | golgi | 25.71 | 8.98 |
| CDY34291 | Canola | golgi | 25.71 | 8.92 |
| CDX87682 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| MapMan:19.2.3.1.1.2 | Gene3D:3.90.70.10 | GO:A0A078CLP0 | EnsemblPlants:CDX76934 | ProteinID:CDX76934 | ProteinID:CDX76934.1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006464 | GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016579 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0036459 |
| EnsemblPlantsGene:GSBRNA2T00127469001 | InterPro:IPR028889 | PFAM:PF00443 | ScanProsite:PS00972 | ScanProsite:PS00973 | PFscan:PS50235 |
| PANTHER:PTHR43942 | PANTHER:PTHR43942:SF5 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C19_UCH | SUPFAM:SSF54001 | UniParc:UPI0004EE0FC4 |
| InterPro:USP_CS | InterPro:USP_dom | : | : | : | : |
Description
BnaC08g35200D
Coordinates
chrLK031808:+:2152252..2153901
Molecular Weight (calculated)
40981.6 Da
IEP (calculated)
6.964
GRAVY (calculated)
-0.456
Length
354 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVAGSKLEK ALWRERYFGF ENFGNTCYCN SVLQALYFCA PFREQLLEYY SKNNKSCEEN LLTCLADLFS QISSQKKKTG VIAPKRFVQR LKKQNVLFRS
101: YMHQDAHEFL NYLLNELDDI LEKEAKAAKT DNETSSNGPK LLQANGVHKE PTVTWVHKIF QGTLTNETRC LRCETVTARD ETFLDLSLDI EQNSSITSCL
201: NNFCSTETLH SEDKFFCDKC CSLQEAQKRM KIKKPPHILV IHLKRFKYIE QLGRYKKLSY RVVFPLELKL SNTVEEYADT EYSLFAVVVH VGTGPNHGHY
301: VSLVKSHNHW LFFDDENVEM IEESSVQTFF GSSQEYSSNT DHGYILFYES LGTR
101: YMHQDAHEFL NYLLNELDDI LEKEAKAAKT DNETSSNGPK LLQANGVHKE PTVTWVHKIF QGTLTNETRC LRCETVTARD ETFLDLSLDI EQNSSITSCL
201: NNFCSTETLH SEDKFFCDKC CSLQEAQKRM KIKKPPHILV IHLKRFKYIE QLGRYKKLSY RVVFPLELKL SNTVEEYADT EYSLFAVVVH VGTGPNHGHY
301: VSLVKSHNHW LFFDDENVEM IEESSVQTFF GSSQEYSSNT DHGYILFYES LGTR
001: MNLSLLQALY FCAPFREQLL EHYANNKADA EENLLTCLAD LFSQISSQKK KTGVIAPKRF VQRLKKQNEL FRSYMHQDAH EFLNYLLNEL VEILEKETQA
101: TKADNETSSS PEKIANVLKA PLANGVHKEP IVTWVHKIFQ GILTNETRCL RCETVTARDE TFLDLSLDIE QNSSITSCLK NFSSTETLHA EDKFFCDKCC
201: SLQEAQKRMK IKKPPHILVI HLKRFKYMEQ LGRYKKLSYR VVFPLELKLS NTVDEYVDIE YSLFAVVVHV GSGPNHGHYV SLVKSHNHWL FFDDESVEII
301: EESAVQTFFG SSQEYSSNTD HGYILLYESL GTR
101: TKADNETSSS PEKIANVLKA PLANGVHKEP IVTWVHKIFQ GILTNETRCL RCETVTARDE TFLDLSLDIE QNSSITSCLK NFSSTETLHA EDKFFCDKCC
201: SLQEAQKRMK IKKPPHILVI HLKRFKYMEQ LGRYKKLSYR VVFPLELKLS NTVDEYVDIE YSLFAVVVHV GSGPNHGHYV SLVKSHNHWL FFDDESVEII
301: EESAVQTFFG SSQEYSSNTD HGYILLYESL GTR
Arabidopsis Description
UBP4UBP4 [Source:UniProtKB/TrEMBL;Acc:A0A178W1M0]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,cytosol,plasma membrane,golgi]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,cytosol,plasma membrane,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.