Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- plastid 2
- endoplasmic reticulum 3
- extracellular 2
- vacuole 3
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra010647.1-P | Field mustard | nucleus | 76.39 | 100.0 |
| CDY68864 | Canola | nucleus | 76.39 | 100.0 |
| CDX69375 | Canola | nucleus | 74.74 | 98.11 |
| AT4G39910.1 | Thale cress | nucleus | 73.92 | 97.03 |
| CDY63898 | Canola | nucleus | 74.33 | 90.95 |
| VIT_07s0141g00230.t01 | Wine grape | nucleus | 68.38 | 90.24 |
| KRH59329 | Soybean | nucleus | 68.38 | 90.24 |
| KRH43175 | Soybean | nucleus | 68.17 | 89.97 |
| CDY13770 | Canola | nucleus | 65.71 | 89.89 |
| CDX76934 | Canola | nucleus | 65.3 | 89.83 |
| KRH31299 | Soybean | nucleus | 67.56 | 89.16 |
| GSMUA_Achr10P... | Banana | cytosol | 63.04 | 88.99 |
| KRG97572 | Soybean | nucleus | 67.35 | 88.89 |
| PGSC0003DMT400032703 | Potato | nucleus | 65.3 | 86.89 |
| GSMUA_Achr7P19160_001 | Banana | mitochondrion | 52.57 | 83.93 |
| GSMUA_Achr8P14390_001 | Banana | cytosol | 63.04 | 83.88 |
| HORVU4Hr1G078590.1 | Barley | cytosol | 62.42 | 83.06 |
| Os03t0190800-01 | Rice | cytosol | 62.22 | 82.79 |
| TraesCS4A01G406600.1 | Wheat | cytosol | 62.22 | 82.79 |
| TraesCS4B01G306100.1 | Wheat | cytosol | 62.22 | 82.79 |
| Zm00001d028005_P001 | Maize | nucleus | 62.22 | 82.79 |
| TraesCS4D01G304300.1 | Wheat | cytosol | 62.01 | 82.51 |
| TraesCS7D01G125700.1 | Wheat | nucleus | 61.81 | 82.24 |
| EER92723 | Sorghum | nucleus | 61.4 | 81.69 |
| GSMUA_Achr10P... | Banana | nucleus | 62.22 | 81.02 |
| VIT_09s0070g00500.t01 | Wine grape | golgi, mitochondrion, nucleus, peroxisome | 58.11 | 79.05 |
| CDY50263 | Canola | cytosol | 33.06 | 59.41 |
| CDX72275 | Canola | cytosol | 18.28 | 24.05 |
| CDY23262 | Canola | nucleus | 19.3 | 17.18 |
| CDY36465 | Canola | cytosol | 19.71 | 16.35 |
| CDY28224 | Canola | endoplasmic reticulum, vacuole | 19.71 | 16.27 |
| CDX68701 | Canola | endoplasmic reticulum, extracellular | 19.51 | 15.91 |
| CDX75188 | Canola | vacuole | 19.92 | 15.88 |
| CDX68773 | Canola | nucleus, plasma membrane | 19.92 | 15.8 |
| CDX87681 | Canola | nucleus | 20.12 | 15.56 |
| CDX76553 | Canola | cytosol | 20.33 | 15.42 |
| CDX85744 | Canola | cytosol | 18.07 | 15.12 |
| CDY40119 | Canola | nucleus | 18.07 | 15.07 |
| CDY45587 | Canola | endoplasmic reticulum, vacuole | 19.3 | 14.85 |
| CDY58499 | Canola | endoplasmic reticulum | 21.97 | 14.84 |
| CDX75770 | Canola | mitochondrion, nucleus | 20.12 | 14.76 |
| CDY20330 | Canola | vacuole | 19.3 | 14.62 |
| CDY37145 | Canola | cytosol | 19.92 | 14.56 |
| CDY34761 | Canola | endoplasmic reticulum, vacuole | 19.1 | 14.44 |
| CDX76801 | Canola | endoplasmic reticulum, golgi, vacuole | 19.3 | 14.44 |
| CDY08792 | Canola | vacuole | 21.56 | 14.02 |
| CDX98449 | Canola | mitochondrion | 20.12 | 13.92 |
| CDY14564 | Canola | golgi | 21.56 | 13.78 |
| CDX77686 | Canola | endoplasmic reticulum | 21.36 | 13.77 |
| CDX97571 | Canola | mitochondrion | 19.92 | 13.7 |
| CDX96790 | Canola | nucleus | 20.33 | 11.86 |
| CDY48465 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 21.15 | 11.76 |
| CDX83925 | Canola | nucleus | 20.33 | 11.69 |
| CDY11838 | Canola | nucleus, plastid | 19.51 | 11.6 |
| CDY65125 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 20.74 | 11.52 |
| CDX88651 | Canola | nucleus, plastid | 19.3 | 11.41 |
| CDY32735 | Canola | nucleus | 18.69 | 11.36 |
| CDY02782 | Canola | nucleus | 18.48 | 11.24 |
| CDY57464 | Canola | nucleus | 19.51 | 11.2 |
| CDY55010 | Canola | nucleus | 19.51 | 11.18 |
| CDY11021 | Canola | golgi | 20.53 | 9.91 |
| CDY03441 | Canola | golgi | 20.53 | 9.87 |
| CDY34291 | Canola | golgi | 20.53 | 9.8 |
| CDX92643 | Canola | golgi | 20.33 | 9.77 |
| CDX87682 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| MapMan:19.2.3.1.1.2 | Gene3D:3.90.70.10 | GO:A0A078JME2 | UniProt:A0A078JME2 | EnsemblPlants:CDY68683 | ProteinID:CDY68683 |
| ProteinID:CDY68683.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006464 | GO:GO:0006511 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016579 | GO:GO:0016787 | GO:GO:0019538 |
| GO:GO:0036459 | EnsemblPlantsGene:GSBRNA2T00077061001 | InterPro:IPR028889 | PFAM:PF00443 | ScanProsite:PS00972 | ScanProsite:PS00973 |
| PFscan:PS50235 | PANTHER:PTHR43942 | PANTHER:PTHR43942:SF5 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C19_UCH | SUPFAM:SSF54001 |
| TMHMM:TMhelix | UniParc:UPI0004EE7E9F | InterPro:USP_CS | InterPro:USP_dom | SEG:seg | : |
Description
BnaAnng28020DBnaAnng28020D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JME2]
Coordinates
chrLK037798:+:2..4804
Molecular Weight (calculated)
56705.5 Da
IEP (calculated)
7.915
GRAVY (calculated)
-0.429
Length
487 amino acids
Sequence
(BLAST)
(BLAST)
001: LNCFFIFFST FSFFFSTYYF AYSPHQLQSD FWYYRFLRSR NAYIKVEHGS ETTNPEKQFY QVILFVPIRE LHKARERLLR NLKNHPIESN NTQIRIERER
101: IRSEKTVIRR LVLGLMGAAG SKLEKALGDQ FPEGERYFGF ENFGNTCYCN SVLQALYFCV PFREQLLEYY TSNKSVADSE ENLMTCLADL FSQISSQKKK
201: TGVIAPKRFV QRLKKQNELF RSYMHQDAHE FLNYLLNEVV DILEKEAKAT TKPERETSSS SSPEKIANGP KAPLANGVHK EPVVTWVHNI FQGILTNETR
301: CLRCETVTAR DETFLDLSLD IEQNSSITSC LKNFSSTETL HAEDKFFCDK CCSLQEAQKR MKIKKPPHIL VIHLKRFKYM EQLGRYKKLS YRVVFPLELK
401: LSNTVEPYTD VEYSLFAVVV HVGSGPNHGH YVSLVKSHNH WLFFDDENVE MIEESAVQTF FGSSQEYSSN TDHGYILFYE SLGPTTK
101: IRSEKTVIRR LVLGLMGAAG SKLEKALGDQ FPEGERYFGF ENFGNTCYCN SVLQALYFCV PFREQLLEYY TSNKSVADSE ENLMTCLADL FSQISSQKKK
201: TGVIAPKRFV QRLKKQNELF RSYMHQDAHE FLNYLLNEVV DILEKEAKAT TKPERETSSS SSPEKIANGP KAPLANGVHK EPVVTWVHNI FQGILTNETR
301: CLRCETVTAR DETFLDLSLD IEQNSSITSC LKNFSSTETL HAEDKFFCDK CCSLQEAQKR MKIKKPPHIL VIHLKRFKYM EQLGRYKKLS YRVVFPLELK
401: LSNTVEPYTD VEYSLFAVVV HVGSGPNHGH YVSLVKSHNH WLFFDDENVE MIEESAVQTF FGSSQEYSSN TDHGYILFYE SLGPTTK
001: MGAAGSKLEK ALGDQFPEGE RYFGFENFGN TCYCNSVLQA LYFCVPFREQ LLEYYTSNKS VADAEENLMT CLADLFSQIS SQKKKTGVIA PKRFVQRLKK
101: QNELFRSYMH QDAHEFLNYL LNEVVDILEK EAKATKTEHE TSSSSSPEKI ANGLKVPQAN GVVHKEPIVT WVHNIFQGIL TNETRCLRCE TVTARDETFL
201: DLSLDIEQNS SITSCLKNFS STETLHAEDK FFCDKCCSLQ EAQKRMKIKK PPHILVIHLK RFKYIEQLGR YKKLSYRVVF PLELKLSNTV EPYADVEYSL
301: FAVVVHVGSG PNHGHYVSLV KSHNHWLFFD DENVEMIEES AVQTFFGSSQ EYSSNTDHGY ILFYESLGPT K
101: QNELFRSYMH QDAHEFLNYL LNEVVDILEK EAKATKTEHE TSSSSSPEKI ANGLKVPQAN GVVHKEPIVT WVHNIFQGIL TNETRCLRCE TVTARDETFL
201: DLSLDIEQNS SITSCLKNFS STETLHAEDK FFCDKCCSLQ EAQKRMKIKK PPHILVIHLK RFKYIEQLGR YKKLSYRVVF PLELKLSNTV EPYADVEYSL
301: FAVVVHVGSG PNHGHYVSLV KSHNHWLFFD DENVEMIEES AVQTFFGSSQ EYSSNTDHGY ILFYESLGPT K
Arabidopsis Description
UBP3Ubiquitin carboxyl-terminal hydrolase 3 [Source:UniProtKB/Swiss-Prot;Acc:O24454]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.