Skip to main content
crop-pal logo
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • plastid 3
  • nucleus 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra020400.1-P Field mustard nucleus 96.88 93.16
CDY02782 Canola nucleus 85.77 85.77
CDY11838 Canola nucleus, plastid 71.04 69.47
CDX88651 Canola nucleus, plastid 71.29 69.3
CDY57464 Canola nucleus 70.79 66.86
CDY55010 Canola nucleus 69.04 65.06
AT5G57990.1 Thale cress nucleus 65.92 61.47
KRH72298 Soybean cytosol, plastid 32.46 51.18
GSMUA_Achr3P04660_001 Banana nucleus 33.21 44.33
VIT_19s0014g00210.t01 Wine grape nucleus 40.95 36.69
KRH03060 Soybean nucleus 41.07 36.43
VIT_00s0174g00260.t01 Wine grape nucleus 44.32 35.61
Solyc07g005530.2.1 Tomato nucleus 39.7 34.45
PGSC0003DMT400028924 Potato nucleus 39.45 34.13
Os06t0184300-01 Rice mitochondrion 38.95 33.77
HORVU7Hr1G030300.1 Barley nucleus 38.95 33.55
TraesCS7A01G147900.1 Wheat nucleus 38.45 33.44
TraesCS7B01G051400.2 Wheat nucleus 39.08 33.33
TraesCS7D01G149800.1 Wheat nucleus 38.83 33.19
EER89337 Sorghum nucleus 37.7 32.93
Zm00001d045104_P005 Maize nucleus 35.58 31.56
GSMUA_Achr4P01920_001 Banana nucleus 37.7 31.26
GSMUA_Achr6P01970_001 Banana nucleus, plastid 31.34 29.56
TraesCS6D01G339500.1 Wheat nucleus 35.58 27.59
TraesCS6A01G357500.1 Wheat mitochondrion, nucleus 35.71 26.7
TraesCS6B01G389500.1 Wheat nucleus 35.21 26.38
CDX76934 Canola nucleus 11.36 25.71
CDY13770 Canola nucleus 11.36 25.56
Os02t0795000-01 Rice nucleus 36.83 24.89
CDX72275 Canola cytosol 11.49 24.86
CDX69375 Canola nucleus 11.36 24.53
CDY68864 Canola nucleus 11.36 24.46
CDY63898 Canola nucleus 11.61 23.37
CDX76553 Canola cytosol 17.73 22.12
CDX75770 Canola mitochondrion, nucleus 17.98 21.69
CDX87681 Canola nucleus 16.85 21.43
CDY37145 Canola cytosol 17.48 21.02
CDX75188 Canola vacuole 15.98 20.95
CDY45587 Canola endoplasmic reticulum, vacuole 16.35 20.7
CDY34761 Canola endoplasmic reticulum, vacuole 16.6 20.65
CDX76801 Canola endoplasmic reticulum, golgi, vacuole 16.73 20.58
CDY20330 Canola vacuole 16.48 20.53
CDX68773 Canola nucleus, plasma membrane 15.73 20.52
CDX97571 Canola mitochondrion 18.1 20.48
CDX98449 Canola mitochondrion 17.73 20.17
CDY58499 Canola endoplasmic reticulum 17.6 19.56
CDX77686 Canola endoplasmic reticulum 18.23 19.34
CDY68683 Canola endoplasmic reticulum, vacuole 11.36 18.69
CDY23262 Canola nucleus 12.23 17.92
CDX85744 Canola cytosol 12.73 17.53
CDY40119 Canola nucleus 12.61 17.29
CDY28224 Canola endoplasmic reticulum, vacuole 12.23 16.61
CDY36465 Canola cytosol 12.11 16.52
CDY08792 Canola vacuole 15.23 16.29
CDX68701 Canola endoplasmic reticulum, extracellular 11.98 16.08
CDY50263 Canola cytosol 5.37 15.87
CDY14564 Canola golgi 14.86 15.62
CDX83925 Canola nucleus 16.1 15.23
CDX87682 Canola cytosol 0.62 15.15
CDX96790 Canola nucleus 15.48 14.85
CDY48465 Canola endoplasmic reticulum, plasma membrane, vacuole 15.48 14.16
CDY65125 Canola endoplasmic reticulum, plasma membrane, vacuole 15.48 14.14
CDY11021 Canola golgi 17.23 13.68
CDX92643 Canola golgi 17.1 13.52
CDY03441 Canola golgi 16.48 13.03
CDY34291 Canola golgi 16.23 12.75
Protein Annotations
MapMan:19.2.3.1.1.9Gene3D:3.90.70.10GO:A0A078H289UniProt:A0A078H289EnsemblPlants:CDY32735ProteinID:CDY32735
ProteinID:CDY32735.1ncoils:CoilGO:GO:0003674GO:GO:0003824GO:GO:0006464GO:GO:0006511
GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009987GO:GO:0016579GO:GO:0016787
GO:GO:0019538GO:GO:0036459EnsemblPlantsGene:GSBRNA2T00052788001InterPro:IPR028889PFAM:PF00443ScanProsite:PS00972
ScanProsite:PS00973PFscan:PS50235PANTHER:PTHR44033PANTHER:PTHR44033:SF1InterPro:Papain_like_cys_pep_sfInterPro:Peptidase_C19_UCH
SUPFAM:SSF54001UniParc:UPI0004EE5E89InterPro:USP_CSInterPro:USP_domSEG:seg:
Description
BnaA02g07970DBnaA02g07970D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H289]
Coordinates
chrLK032298:+:404169..407767
Molecular Weight (calculated)
88988.2 Da
IEP (calculated)
9.989
GRAVY (calculated)
-0.659
Length
801 amino acids
Sequence
(BLAST)
001: METLNPSSAN KRAFSSPSSK RSDGSDPLEH GLDRELTFNR TIRKIGAGLE NLGNTCFLNS VVQCLTYTEP LAAYLQDVGH GRRCHMAGFC ALCAMQKHVR
101: LALQASGKIV APKYLVSNLR CVSRNFRNCR QEDAHEYMIN LLECMHRCCL PSGVPSESSD AYRSSLVHKI FGGSLRSRVK CAQCSHCSDK FDPFLDLSLD
201: ISKADSLQRA LSRFTAVELL DDGAKIYQCE RCKQKVRAEK QMTVSKAPYV LTVHLKRFEA HRSEKIDKKV QFASAVDMKP FVSGPYAGNL KYTLYGVLVH
301: YGRSSHSGHY ACFVRTSSGM WYSLDDNRVS KVSEKTVFNQ KAYMLFYVRD RQNPAPKNTV AVVNKETPRE SLATNRTSLN IFSSRNDQVN SSAAMKACSL
401: KAPVANGISP LRSCERGAPA VLTQKDLNAK ETQNDAPSIV EAKEILKREN GAEPLEPCAK GAPAVLAQKD LNKELPSSAE VKEIPNRENG SAPLKPCDLL
501: APSLLTQKDL NTKETLQKEA PLPQANGDVS LVKESSRAAC TILLGKDSPS KEAVDVNQTL GHQLEESATS IKSVKASSDE GTLTTPRKTR KGSMKTLKVG
601: FKSFKLTLGV RKKKKQKKRR SSAQDQLAKD NSVRVHDEKI RSRNGNMLLG SPAVELKERS NQNGAVLASD QEQTWKSSDM SEASQNAKRK RESAKEEQNS
701: LQKEQVTILT RGLAETVVAK RDEEVSASRK MGKSESTRIG YVADECDEEY DKGKKKKIRM KEEEMYAVPN PFQLFAPKKQ QTDTKKKWTQ RMNTAKTGFR
801: I
Best Arabidopsis Sequence Match ( AT1G17110.1 )
(BLAST)
001: MLEPRGADIP ILFLVLVVLP VVAYILLGKW SNISEKRVRA NLLAQMAAEE ALRAETVVNA DRGVRFESVA TENRAQRTRT KTVSAGGGAV RAEFDAGARE
101: TVAEQRSDSV TATCGVTVVA PVNNNELHVC ARCFGPAKTR CSRCKSVRYC SGKCQIIHWR VAHKDECVPV ESCSSSSERV SFEKDSVLYD HGMDSTMYSN
201: NTTQAAKGKT SKSSVDFASL GISQNDITPQ INTQGRKSVG KQHSSKANRE SCRRDSATVF DSSDEAASAG GDNKTSHIKH KSRGNSYAAE TNPRRHSVDS
301: SAVQMNGQSF VSGMQESHKH ENNLGVRSSF GCPNTQYPSN GTRTATLPRT GINKSGEQSC TETSKKGQVA AVSKTVRSKD TGISEESNGI SSTMGIMKMM
401: GLRNSTKHDD RYKNLKMLFP YEEFLKFFQC EVFDLSPRGL VNCGNSCYAN AVLQSLTCTK PLVAYLLRRS HSRSCSGKDW CLMCELEQHV MMLRESGGPL
501: SASRILSHMR SINCQIGDGS QEDAHEFLRL LVASMQSICL ERLGGETKVD PRLQETTLVQ HMFGGRLRSK VKCLRCDHES ERYENIMDLT LEIYGWVESL
601: QDALTQFTRP EDLDGENMYR CSRCAGYVRA RKELSIHEAP NILTIVLKRF QEGRYGKINK CISFPEMLDM IPFMTRTGDV PPLYMLYAVI VHLDTLNASF
701: SGHYISYVKD LRGNWYRIDD SEIHPVPMTQ VMSEGAYMLF YMRSYPRPQR GEHNGKAPVH HSQPRNEMKE QRKPVNRFKP RADHKNTESS SSEWSLFTSS
801: DEASFTTEST RDSFSTIDYT DVCHVVDSSS PFAIFNNVYH NVEPSPHNTV ACRMFSGTKP ETRYFVEQET NHNNTVVLDA TPSLYPIPAP YPPHDYYDQS
901: MYVNYETNPE FNNGQDQDRT YSYW
Arabidopsis Description
UBP15Ubiquitin-specific protease 15 [Source:UniProtKB/TrEMBL;Acc:F4I642]
SUBAcon: [endoplasmic reticulum,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.