Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
- plastid 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
GSMUA_Achr3P04660_001 | Banana | nucleus | 45.86 | 73.83 |
KRH72298 | Soybean | cytosol, plastid | 30.64 | 58.27 |
VIT_19s0014g00210.t01 | Wine grape | nucleus | 38.82 | 41.95 |
VIT_00s0174g00260.t01 | Wine grape | nucleus | 42.44 | 41.12 |
KRH03060 | Soybean | nucleus | 38.2 | 40.86 |
CDY11838 | Canola | nucleus, plastid | 34.37 | 40.54 |
Os06t0184300-01 | Rice | mitochondrion | 38.61 | 40.37 |
Solyc07g005530.2.1 | Tomato | nucleus | 38.51 | 40.3 |
CDX88651 | Canola | nucleus, plastid | 34.37 | 40.29 |
PGSC0003DMT400028924 | Potato | nucleus | 38.61 | 40.28 |
Bra006790.1-P | Field mustard | nucleus, plastid | 34.37 | 39.95 |
GSMUA_Achr6P01970_001 | Banana | nucleus, plastid | 34.89 | 39.69 |
EER89337 | Sorghum | nucleus | 37.16 | 39.15 |
HORVU7Hr1G030300.1 | Barley | nucleus | 37.27 | 38.71 |
TraesCS7B01G051400.2 | Wheat | nucleus | 37.27 | 38.34 |
CDY02782 | Canola | nucleus | 31.78 | 38.33 |
TraesCS7A01G147900.1 | Wheat | nucleus | 36.44 | 38.22 |
Zm00001d045104_P005 | Maize | nucleus | 35.71 | 38.21 |
TraesCS7D01G149800.1 | Wheat | nucleus | 36.75 | 37.89 |
CDY32735 | Canola | nucleus | 31.26 | 37.7 |
CDY55010 | Canola | nucleus | 33.13 | 37.65 |
AT5G57990.1 | Thale cress | nucleus | 33.33 | 37.49 |
CDY57464 | Canola | nucleus | 32.82 | 37.38 |
Bra020400.1-P | Field mustard | nucleus | 31.99 | 37.09 |
GSMUA_Achr4P19070_001 | Banana | cytosol, golgi, mitochondrion, plastid | 13.15 | 36.08 |
TraesCS6D01G339500.1 | Wheat | nucleus | 36.34 | 33.98 |
Bra002683.1-P | Field mustard | nucleus | 34.06 | 33.5 |
TraesCS6B01G389500.1 | Wheat | nucleus | 36.54 | 33.02 |
TraesCS6A01G357500.1 | Wheat | mitochondrion, nucleus | 36.23 | 32.68 |
Os02t0795000-01 | Rice | nucleus | 38.51 | 31.39 |
GSMUA_Achr7P05090_001 | Banana | vacuole | 13.98 | 28.91 |
GSMUA_Achr10P... | Banana | cytosol | 10.14 | 28.41 |
GSMUA_Achr7P05330_001 | Banana | cytosol | 9.01 | 27.27 |
GSMUA_Achr1P11380_001 | Banana | cytosol | 10.25 | 26.54 |
GSMUA_Achr8P14390_001 | Banana | cytosol | 9.94 | 26.23 |
GSMUA_Achr5P13990_001 | Banana | endoplasmic reticulum | 15.73 | 25.94 |
GSMUA_Achr10P... | Banana | nucleus | 9.94 | 25.67 |
GSMUA_Achr7P19160_001 | Banana | mitochondrion | 8.07 | 25.57 |
GSMUA_Achr7P19170_001 | Banana | cytosol | 3.42 | 24.63 |
GSMUA_Achr9P10330_001 | Banana | mitochondrion | 15.53 | 24.08 |
GSMUA_Achr8P09770_001 | Banana | cytosol | 10.46 | 23.6 |
GSMUA_Achr7P17050_001 | Banana | plastid | 11.59 | 21.46 |
GSMUA_Achr7P19010_001 | Banana | nucleus | 9.21 | 19.35 |
GSMUA_Achr10P... | Banana | nucleus | 8.07 | 19.21 |
GSMUA_Achr3P03560_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 14.6 | 16.83 |
GSMUA_Achr5P22990_001 | Banana | vacuole | 15.01 | 16.13 |
GSMUA_Achr2P20080_001 | Banana | plasma membrane | 14.7 | 15.09 |
GSMUA_Achr3P17560_001 | Banana | endoplasmic reticulum, golgi | 14.39 | 15.01 |
GSMUA_Achr1P10260_001 | Banana | endoplasmic reticulum, plasma membrane | 16.05 | 13.7 |
GSMUA_AchrUn_... | Banana | golgi, vacuole | 13.98 | 13.33 |
GSMUA_Achr10P... | Banana | golgi | 5.9 | 12.67 |
GSMUA_Achr7P19020_001 | Banana | endoplasmic reticulum, golgi | 4.66 | 11.66 |
Protein Annotations
MapMan:19.2.3.1.1.9 | Gene3D:3.90.70.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006464 | GO:GO:0006511 |
GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016579 | GO:GO:0016787 |
GO:GO:0019538 | GO:GO:0036459 | EnsemblPlantsGene:GSMUA_Achr4G01920_001 | EnsemblPlants:GSMUA_Achr4P01920_001 | EnsemblPlants:GSMUA_Achr4T01920_001 | InterPro:IPR028889 |
UniProt:M0SKA9 | PFAM:PF00443 | ScanProsite:PS00972 | ScanProsite:PS00973 | PFscan:PS50235 | PANTHER:PTHR44033 |
InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C19_UCH | SUPFAM:SSF54001 | UniParc:UPI00029503C6 | InterPro:USP_CS | InterPro:USP_dom |
SEG:seg | : | : | : | : | : |
Description
Putative ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr4G01920_001]
Coordinates
chr4:-:1693738..1701670
Molecular Weight (calculated)
107809.0 Da
IEP (calculated)
9.099
GRAVY (calculated)
-0.618
Length
966 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEGSAVADK PECAAAPASG LSRVESLFHR RIEFHPARKP YSSFSSSDGD FRLETLNPRL GLDRPAVSRG GAFQAGAPSP GKRSGEREFY EHRMDPELSF
101: SITFRRIGAG LANLGNTCFL NSVLQCLTYT EPFAAYLQSG KHKSSCHTAG FCAMCALQNH VITALQSNGK ILSPSHLVKN LRCISRNFRN SRQEDAHEYM
201: VNLLESMHKC CLPSGVPSES PGAYEKSLVH KIFGGHLRSQ VKCTQCSYSS SKFDPFVDLS LEIAKADSLW KALTHFTAVE QLDGGERQYQ CQHCKEKVRA
301: LKQLTIHKAP YVLTIHLKRF SSYVPGQKID KKVDFEPTLD LKPFLSDQHG GDVKYTLYGV LVHAGWSTHS GHYFCYVRTS SGMWHSLDDN QVGQVSEKTV
401: LAQKAYMLFY VRDRTSLPKG SVNMVHKDNI SANATERKLI PESSLALNGA LKNCVRTCST NVQSGSVKDT LSLHPLPQAI LTLQKSKTPT LYEVPEVQID
501: REAIGRETST LQPDGDSLPE GLQQTTSTSV TLQVMRKDFM VEEAKATCRI DATFILGSHQ SDDERCQISG STNGEVKSVG VIAVLNNSSC TRPKSQKHEN
601: KLLKERHMAK DNDAEKGILQ THDMLCNAVN GIPEENRKIK LLNGFTRKEA NGRAPVGNLT THHNEWCSSS MLSHVENLHK QEKPRLVNLP KRLDTANSFV
701: QEDTFKDDSR IDNLKQLKPK KIAKRPLRGI CFGRNHIFFA SLNLHKIKKV RKSKKQPSSY KILLKDIPDD INTNDLAAST SEATVREHCH EKHCRSGLVE
801: DNNSKMVKSG NYCNGESLSS TNRGDKLKNT NKNVTLDNFG LPRSCLSSAE KLLSSRATYT DDKGIHHDFM NLLMGELKET TVSRWDDVEL PKLELNGPES
901: SRNTSIGYVL DEWDEDYDQG KRKKLRKSQQ SFGGPNPFQE TANAKAHQKL NSELGQTKRG NQPLRI
101: SITFRRIGAG LANLGNTCFL NSVLQCLTYT EPFAAYLQSG KHKSSCHTAG FCAMCALQNH VITALQSNGK ILSPSHLVKN LRCISRNFRN SRQEDAHEYM
201: VNLLESMHKC CLPSGVPSES PGAYEKSLVH KIFGGHLRSQ VKCTQCSYSS SKFDPFVDLS LEIAKADSLW KALTHFTAVE QLDGGERQYQ CQHCKEKVRA
301: LKQLTIHKAP YVLTIHLKRF SSYVPGQKID KKVDFEPTLD LKPFLSDQHG GDVKYTLYGV LVHAGWSTHS GHYFCYVRTS SGMWHSLDDN QVGQVSEKTV
401: LAQKAYMLFY VRDRTSLPKG SVNMVHKDNI SANATERKLI PESSLALNGA LKNCVRTCST NVQSGSVKDT LSLHPLPQAI LTLQKSKTPT LYEVPEVQID
501: REAIGRETST LQPDGDSLPE GLQQTTSTSV TLQVMRKDFM VEEAKATCRI DATFILGSHQ SDDERCQISG STNGEVKSVG VIAVLNNSSC TRPKSQKHEN
601: KLLKERHMAK DNDAEKGILQ THDMLCNAVN GIPEENRKIK LLNGFTRKEA NGRAPVGNLT THHNEWCSSS MLSHVENLHK QEKPRLVNLP KRLDTANSFV
701: QEDTFKDDSR IDNLKQLKPK KIAKRPLRGI CFGRNHIFFA SLNLHKIKKV RKSKKQPSSY KILLKDIPDD INTNDLAAST SEATVREHCH EKHCRSGLVE
801: DNNSKMVKSG NYCNGESLSS TNRGDKLKNT NKNVTLDNFG LPRSCLSSAE KLLSSRATYT DDKGIHHDFM NLLMGELKET TVSRWDDVEL PKLELNGPES
901: SRNTSIGYVL DEWDEDYDQG KRKKLRKSQQ SFGGPNPFQE TANAKAHQKL NSELGQTKRG NQPLRI
001: MEVATSSTEI TIQTDRDPSS NNNGSCAVAS STASAVFRKI EFHPARKPFN GFSNGRSDFK IETLNPCSSN QRLLSAPSAK KPDSSDLLEH GFEPDLTFSI
101: TFRKIGAGLQ NLGNTCFLNS VLQCLTYTEP LAATLQTAAH QKYCHVAGFC ALCAIQKHVR TARQANGRIL APKDLVSNLR CISRNFRNCR QEDAHEYMIN
201: LLECMHKCSL PSGVPSESSD AYRRSLVHKI FGGSLRSQVK CEQCSHCSNK FDPFLDLSLD ISKADSLQRA LSRFTAVELL DNGAKVYQCE RCKQKVKAKK
301: QLTVSKAPYV LTVHLKRFEA HRSEKIDRKV DFTSAIDMKP FVSGPHEGNL KYTLYGVLVH YGRSSHSGHY ACFVRTSSGM WYSLDDNRVV QVSEKTVFNQ
401: KAYMLFYVRD RQNAVPKNSV PVVKKESFAT NRASLIVASN IKDQVNGSTV IKECGFGALV ANGLAPLKSC GPSTPAVLTQ KDLNAKETQN NAISNVEAKE
501: ILETENGSAP VKTCDLAAPT VLVQKDLNTK EIFQKEVPLP QANGEGSLVK EDSKAACLIL PEKVSPHLDG SANAQTLVKL PTLGPKAENS VEEKNSLNNL
601: NEPANSLKVI NVSVGNPPVE KAVLIDQTMG HHLEESATSI ESLKLTSERE TLTTPKKTRK PKTKTLKVEF KFFKLALGLR KKKVQRRERL STTVAGEIIS
701: EELLSKKRVK YQDTSLIAPS KMISSSDGAV TSDQQQPVGS SDLSEASQNA KRKRESVLLQ KEAVNILTRG VPETVVAKWD EEISASQKRG SKSEGASSIG
801: YVADEWDEEY DRGKKKKIRI KEESYRGPNP FQMLASKRQK ETKKKWTQSI TDAKTAYRI
101: TFRKIGAGLQ NLGNTCFLNS VLQCLTYTEP LAATLQTAAH QKYCHVAGFC ALCAIQKHVR TARQANGRIL APKDLVSNLR CISRNFRNCR QEDAHEYMIN
201: LLECMHKCSL PSGVPSESSD AYRRSLVHKI FGGSLRSQVK CEQCSHCSNK FDPFLDLSLD ISKADSLQRA LSRFTAVELL DNGAKVYQCE RCKQKVKAKK
301: QLTVSKAPYV LTVHLKRFEA HRSEKIDRKV DFTSAIDMKP FVSGPHEGNL KYTLYGVLVH YGRSSHSGHY ACFVRTSSGM WYSLDDNRVV QVSEKTVFNQ
401: KAYMLFYVRD RQNAVPKNSV PVVKKESFAT NRASLIVASN IKDQVNGSTV IKECGFGALV ANGLAPLKSC GPSTPAVLTQ KDLNAKETQN NAISNVEAKE
501: ILETENGSAP VKTCDLAAPT VLVQKDLNTK EIFQKEVPLP QANGEGSLVK EDSKAACLIL PEKVSPHLDG SANAQTLVKL PTLGPKAENS VEEKNSLNNL
601: NEPANSLKVI NVSVGNPPVE KAVLIDQTMG HHLEESATSI ESLKLTSERE TLTTPKKTRK PKTKTLKVEF KFFKLALGLR KKKVQRRERL STTVAGEIIS
701: EELLSKKRVK YQDTSLIAPS KMISSSDGAV TSDQQQPVGS SDLSEASQNA KRKRESVLLQ KEAVNILTRG VPETVVAKWD EEISASQKRG SKSEGASSIG
801: YVADEWDEEY DRGKKKKIRI KEESYRGPNP FQMLASKRQK ETKKKWTQSI TDAKTAYRI
Arabidopsis Description
UBP23Ubiquitin carboxyl-terminal hydrolase 23 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPS4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.