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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • cytosol 1
  • mitochondrion 1
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr3P04660_001 Banana nucleus 45.86 73.83
KRH72298 Soybean cytosol, plastid 30.64 58.27
VIT_19s0014g00210.t01 Wine grape nucleus 38.82 41.95
VIT_00s0174g00260.t01 Wine grape nucleus 42.44 41.12
KRH03060 Soybean nucleus 38.2 40.86
CDY11838 Canola nucleus, plastid 34.37 40.54
Os06t0184300-01 Rice mitochondrion 38.61 40.37
Solyc07g005530.2.1 Tomato nucleus 38.51 40.3
CDX88651 Canola nucleus, plastid 34.37 40.29
PGSC0003DMT400028924 Potato nucleus 38.61 40.28
Bra006790.1-P Field mustard nucleus, plastid 34.37 39.95
GSMUA_Achr6P01970_001 Banana nucleus, plastid 34.89 39.69
EER89337 Sorghum nucleus 37.16 39.15
HORVU7Hr1G030300.1 Barley nucleus 37.27 38.71
TraesCS7B01G051400.2 Wheat nucleus 37.27 38.34
CDY02782 Canola nucleus 31.78 38.33
TraesCS7A01G147900.1 Wheat nucleus 36.44 38.22
Zm00001d045104_P005 Maize nucleus 35.71 38.21
TraesCS7D01G149800.1 Wheat nucleus 36.75 37.89
CDY32735 Canola nucleus 31.26 37.7
CDY55010 Canola nucleus 33.13 37.65
AT5G57990.1 Thale cress nucleus 33.33 37.49
CDY57464 Canola nucleus 32.82 37.38
Bra020400.1-P Field mustard nucleus 31.99 37.09
GSMUA_Achr4P19070_001 Banana cytosol, golgi, mitochondrion, plastid 13.15 36.08
TraesCS6D01G339500.1 Wheat nucleus 36.34 33.98
Bra002683.1-P Field mustard nucleus 34.06 33.5
TraesCS6B01G389500.1 Wheat nucleus 36.54 33.02
TraesCS6A01G357500.1 Wheat mitochondrion, nucleus 36.23 32.68
Os02t0795000-01 Rice nucleus 38.51 31.39
GSMUA_Achr7P05090_001 Banana vacuole 13.98 28.91
GSMUA_Achr10P... Banana cytosol 10.14 28.41
GSMUA_Achr7P05330_001 Banana cytosol 9.01 27.27
GSMUA_Achr1P11380_001 Banana cytosol 10.25 26.54
GSMUA_Achr8P14390_001 Banana cytosol 9.94 26.23
GSMUA_Achr5P13990_001 Banana endoplasmic reticulum 15.73 25.94
GSMUA_Achr10P... Banana nucleus 9.94 25.67
GSMUA_Achr7P19160_001 Banana mitochondrion 8.07 25.57
GSMUA_Achr7P19170_001 Banana cytosol 3.42 24.63
GSMUA_Achr9P10330_001 Banana mitochondrion 15.53 24.08
GSMUA_Achr8P09770_001 Banana cytosol 10.46 23.6
GSMUA_Achr7P17050_001 Banana plastid 11.59 21.46
GSMUA_Achr7P19010_001 Banana nucleus 9.21 19.35
GSMUA_Achr10P... Banana nucleus 8.07 19.21
GSMUA_Achr3P03560_001 Banana endoplasmic reticulum, plasma membrane, vacuole 14.6 16.83
GSMUA_Achr5P22990_001 Banana vacuole 15.01 16.13
GSMUA_Achr2P20080_001 Banana plasma membrane 14.7 15.09
GSMUA_Achr3P17560_001 Banana endoplasmic reticulum, golgi 14.39 15.01
GSMUA_Achr1P10260_001 Banana endoplasmic reticulum, plasma membrane 16.05 13.7
GSMUA_AchrUn_... Banana golgi, vacuole 13.98 13.33
GSMUA_Achr10P... Banana golgi 5.9 12.67
GSMUA_Achr7P19020_001 Banana endoplasmic reticulum, golgi 4.66 11.66
Protein Annotations
MapMan:19.2.3.1.1.9Gene3D:3.90.70.10GO:GO:0003674GO:GO:0003824GO:GO:0006464GO:GO:0006511
GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009987GO:GO:0016579GO:GO:0016787
GO:GO:0019538GO:GO:0036459EnsemblPlantsGene:GSMUA_Achr4G01920_001EnsemblPlants:GSMUA_Achr4P01920_001EnsemblPlants:GSMUA_Achr4T01920_001InterPro:IPR028889
UniProt:M0SKA9PFAM:PF00443ScanProsite:PS00972ScanProsite:PS00973PFscan:PS50235PANTHER:PTHR44033
InterPro:Papain_like_cys_pep_sfInterPro:Peptidase_C19_UCHSUPFAM:SSF54001UniParc:UPI00029503C6InterPro:USP_CSInterPro:USP_dom
SEG:seg:::::
Description
Putative ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr4G01920_001]
Coordinates
chr4:-:1693738..1701670
Molecular Weight (calculated)
107809.0 Da
IEP (calculated)
9.099
GRAVY (calculated)
-0.618
Length
966 amino acids
Sequence
(BLAST)
001: MAEGSAVADK PECAAAPASG LSRVESLFHR RIEFHPARKP YSSFSSSDGD FRLETLNPRL GLDRPAVSRG GAFQAGAPSP GKRSGEREFY EHRMDPELSF
101: SITFRRIGAG LANLGNTCFL NSVLQCLTYT EPFAAYLQSG KHKSSCHTAG FCAMCALQNH VITALQSNGK ILSPSHLVKN LRCISRNFRN SRQEDAHEYM
201: VNLLESMHKC CLPSGVPSES PGAYEKSLVH KIFGGHLRSQ VKCTQCSYSS SKFDPFVDLS LEIAKADSLW KALTHFTAVE QLDGGERQYQ CQHCKEKVRA
301: LKQLTIHKAP YVLTIHLKRF SSYVPGQKID KKVDFEPTLD LKPFLSDQHG GDVKYTLYGV LVHAGWSTHS GHYFCYVRTS SGMWHSLDDN QVGQVSEKTV
401: LAQKAYMLFY VRDRTSLPKG SVNMVHKDNI SANATERKLI PESSLALNGA LKNCVRTCST NVQSGSVKDT LSLHPLPQAI LTLQKSKTPT LYEVPEVQID
501: REAIGRETST LQPDGDSLPE GLQQTTSTSV TLQVMRKDFM VEEAKATCRI DATFILGSHQ SDDERCQISG STNGEVKSVG VIAVLNNSSC TRPKSQKHEN
601: KLLKERHMAK DNDAEKGILQ THDMLCNAVN GIPEENRKIK LLNGFTRKEA NGRAPVGNLT THHNEWCSSS MLSHVENLHK QEKPRLVNLP KRLDTANSFV
701: QEDTFKDDSR IDNLKQLKPK KIAKRPLRGI CFGRNHIFFA SLNLHKIKKV RKSKKQPSSY KILLKDIPDD INTNDLAAST SEATVREHCH EKHCRSGLVE
801: DNNSKMVKSG NYCNGESLSS TNRGDKLKNT NKNVTLDNFG LPRSCLSSAE KLLSSRATYT DDKGIHHDFM NLLMGELKET TVSRWDDVEL PKLELNGPES
901: SRNTSIGYVL DEWDEDYDQG KRKKLRKSQQ SFGGPNPFQE TANAKAHQKL NSELGQTKRG NQPLRI
Best Arabidopsis Sequence Match ( AT5G57990.1 )
(BLAST)
001: MEVATSSTEI TIQTDRDPSS NNNGSCAVAS STASAVFRKI EFHPARKPFN GFSNGRSDFK IETLNPCSSN QRLLSAPSAK KPDSSDLLEH GFEPDLTFSI
101: TFRKIGAGLQ NLGNTCFLNS VLQCLTYTEP LAATLQTAAH QKYCHVAGFC ALCAIQKHVR TARQANGRIL APKDLVSNLR CISRNFRNCR QEDAHEYMIN
201: LLECMHKCSL PSGVPSESSD AYRRSLVHKI FGGSLRSQVK CEQCSHCSNK FDPFLDLSLD ISKADSLQRA LSRFTAVELL DNGAKVYQCE RCKQKVKAKK
301: QLTVSKAPYV LTVHLKRFEA HRSEKIDRKV DFTSAIDMKP FVSGPHEGNL KYTLYGVLVH YGRSSHSGHY ACFVRTSSGM WYSLDDNRVV QVSEKTVFNQ
401: KAYMLFYVRD RQNAVPKNSV PVVKKESFAT NRASLIVASN IKDQVNGSTV IKECGFGALV ANGLAPLKSC GPSTPAVLTQ KDLNAKETQN NAISNVEAKE
501: ILETENGSAP VKTCDLAAPT VLVQKDLNTK EIFQKEVPLP QANGEGSLVK EDSKAACLIL PEKVSPHLDG SANAQTLVKL PTLGPKAENS VEEKNSLNNL
601: NEPANSLKVI NVSVGNPPVE KAVLIDQTMG HHLEESATSI ESLKLTSERE TLTTPKKTRK PKTKTLKVEF KFFKLALGLR KKKVQRRERL STTVAGEIIS
701: EELLSKKRVK YQDTSLIAPS KMISSSDGAV TSDQQQPVGS SDLSEASQNA KRKRESVLLQ KEAVNILTRG VPETVVAKWD EEISASQKRG SKSEGASSIG
801: YVADEWDEEY DRGKKKKIRI KEESYRGPNP FQMLASKRQK ETKKKWTQSI TDAKTAYRI
Arabidopsis Description
UBP23Ubiquitin carboxyl-terminal hydrolase 23 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPS4]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.