Factsheet for GSMUA_Achr7P17050_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g007640.1.1	Tomato	cytosol	26.63	58.65
TraesCS2B01G544700.1	Wheat	mitochondrion	41.38	58.38
TraesCS2D01G517600.1	Wheat	mitochondrion	41.19	58.11
TraesCS2A01G516100.1	Wheat	mitochondrion	41.19	58.11
VIT_11s0118g00280.t01	Wine grape	mitochondrion	31.03	57.24
KRH03615	Soybean	cytosol	63.22	55.74
Zm00001d002086_P001	Maize	plastid	59.96	55.59
EES12962	Sorghum	plastid	59.96	55.4
GSMUA_Achr7P05330_001	Banana	cytosol	33.72	55.17
KRH20191	Soybean	plastid	62.45	54.88
VIT_11s0118g00290.t01	Wine grape	nucleus	36.4	53.98
Os04t0647300-01	Rice	nucleus	47.89	42.3
HORVU2Hr1G114330.1	Barley	cytosol	42.34	39.46
GSMUA_Achr10P...	Banana	cytosol	16.28	24.64
GSMUA_Achr8P14390_001	Banana	cytosol	16.86	24.04
GSMUA_Achr10P...	Banana	nucleus	17.05	23.8
GSMUA_Achr4P19070_001	Banana	cytosol, golgi, mitochondrion, plastid	15.9	23.58
GSMUA_Achr7P19170_001	Banana	cytosol	5.94	23.13
GSMUA_Achr7P05090_001	Banana	vacuole	20.31	22.7
GSMUA_Achr7P19160_001	Banana	mitochondrion	13.03	22.3
GSMUA_Achr1P11380_001	Banana	cytosol	15.33	21.45
GSMUA_Achr8P09770_001	Banana	cytosol	15.71	19.16
GSMUA_Achr3P04660_001	Banana	nucleus	20.31	17.67
GSMUA_Achr5P13990_001	Banana	endoplasmic reticulum	18.2	16.21
GSMUA_Achr9P10330_001	Banana	mitochondrion	17.82	14.93
GSMUA_Achr10P...	Banana	golgi	12.64	14.67
GSMUA_Achr7P19020_001	Banana	endoplasmic reticulum, golgi	10.34	13.99
GSMUA_Achr3P03560_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	20.31	12.65
GSMUA_Achr5P22990_001	Banana	vacuole	20.69	12.01
GSMUA_Achr4P01920_001	Banana	nucleus	21.46	11.59
GSMUA_Achr10P...	Banana	nucleus	9.0	11.58
GSMUA_Achr3P17560_001	Banana	endoplasmic reticulum, golgi	20.5	11.56
GSMUA_Achr2P20080_001	Banana	plasma membrane	20.31	11.26
GSMUA_AchrUn_...	Banana	golgi, vacuole	21.26	10.96
GSMUA_Achr7P19010_001	Banana	nucleus	9.58	10.87
GSMUA_Achr1P10260_001	Banana	endoplasmic reticulum, plasma membrane	20.69	9.55
GSMUA_Achr6P01970_001	Banana	nucleus, plastid	14.18	8.72

Protein Annotations

MapMan:15.3.4.2.2	MapMan:19.2.3.1.1.8	Gene3D:3.30.40.10	Gene3D:3.90.70.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0006464	GO:GO:0006508	GO:GO:0006511	GO:GO:0008150	GO:GO:0008152
GO:GO:0008233	GO:GO:0008234	GO:GO:0008270	GO:GO:0009056	GO:GO:0009987	GO:GO:0016579
GO:GO:0016787	GO:GO:0019538	GO:GO:0036459	GO:GO:0046872	EnsemblPlantsGene:GSMUA_Achr7G17050_001	EnsemblPlants:GSMUA_Achr7P17050_001
EnsemblPlants:GSMUA_Achr7T17050_001	InterPro:IPR001607	InterPro:IPR013083	InterPro:IPR028889	UniProt:M0TI92	PFAM:PF00443
PFAM:PF02148	ScanProsite:PS00972	PFscan:PS50235	PFscan:PS50271	PANTHER:PTHR43961	PANTHER:PTHR43961:SF3
InterPro:Papain_like_cys_pep_sf	InterPro:Peptidase_C19_UCH	SUPFAM:SSF54001	SUPFAM:SSF57850	UniParc:UPI000296E428	InterPro:USP_CS
InterPro:USP_dom	InterPro:Znf_RING/FYVE/PHD	InterPro:Znf_UBP	SEG:seg	:	:

Description

Putative Ubiquitin carboxyl-terminal hydrolase 22 [Source:GMGC_GENE;Acc:GSMUA_Achr7G17050_001]

Coordinates

chr7:-:18196265..18200926

Molecular Weight (calculated)

58097.4 Da

IEP (calculated)

8.997

GRAVY (calculated)

-0.356

Length

522 amino acids

Sequence
(BLAST)

001: MSSNSAADGT RPLRLPPPCS HLAAYRSCGG AAGGGGLRSL HRCLRRRPPL GRPEVHREPG EVPRCASCRR GGPRLYACLA CAAVSCLHHA PDHASAPGHE
101: IAVDVDRAEL FCAACLDQVY DHDFDAAVVI ALTMPAASRP PPPQPGSRAK RPRRGNASSS STITTANSTA AAAAATSCAT SSAPLPWGLR GLNNLGNTCF
201: MNSVLQALLH TPLLRNYFLS DRHNRMVCQQ KSRKKAYSKE RSNARDATVG LQFCLACDLD AMYSAVFSGD RKPYSPAKFL YSWWRYASNL ANYQQHDAHE
301: FFICMLDGIH EKEQDPGKRP SHVSSGECCI AHRVFSGTLR SDVTCTMCGF TSTTYDPCVD ISLDLDSKQD PTKCLERFTR PEKLGADQKL FCQHCQVRQE
401: SLKQMSIRKI PLVTCFHIKR FEHSSMRKMS RKVDQYLHFP FSLDLAPYLS SSILRARYGN RVGKLDAGHY LTYLRLNSQW YRCDDAWITC VSERVVRASQ
501: AYMLFYVQKI LYYKASENVV VS

Best Arabidopsis Sequence Match ( AT5G10790.1 )
(BLAST)

001: MSARISFLKN PDPCNHLSDY KLRYGTDGYK SFNNLFRCFN DARIKIKLQG IDIPRCSYCS VYQKRLYICL ICRSISCSSH ILLHTQLNKG HDIAIDVERS
101: ELYCCACIDQ VYDSEFDEVV VSKQLFGLGM SVKSGADVVA VRSNKKRRLD SQLIIGSNFL VSPRDRREKW TFPLGLRGLN NLGSTCFMNA VLQALVHAPP
201: LRNFWLSGQH NRDLCPRRTM GLLCLPCDLD VIFSAMFSGD RTPYSPAHLL YSWWQHSTNL ATYEQQDSHE FFISLLDRIH ENEGKSKCLY QDNEECQCIT
301: HKAFSGLLRS DVTCTTCGST STTYDPFIDI SLTLDSMNGF SPADCRKNRY SGGPSVNAIM PTLSGCLDFF TRSEKLGPDQ KLNCQSCGEK RESSKQMSIR
401: RLPLLLCLHV KRFEHSLTRK TSRKIDSYLQ YPFRLNMSPY LSSSIIGKRF GNRIFAFDGE GEYDSSSSSS PSAEFEIFAV VTHKGMLESG HYVTYLRLKG
501: LWYRCDDAWI NEVEEEVVRG CECYMLFYAQ ETVIQKAHKE LSYQVISMAD AFPFADC

Arabidopsis Description

UBP22Ubiquitinyl hydrolase 1 [Source:UniProtKB/TrEMBL;Acc:A0A178UPE9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.