Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- golgi 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_11s0118g00280.t01 | Wine grape | mitochondrion | 82.28 | 68.9 |
| TraesCS2B01G544700.1 | Wheat | mitochondrion | 64.98 | 41.62 |
| TraesCS2D01G517600.1 | Wheat | mitochondrion | 64.14 | 41.08 |
| TraesCS2A01G516100.1 | Wheat | mitochondrion | 64.14 | 41.08 |
| KRH03615 | Soybean | cytosol | 78.06 | 31.25 |
| KRH20191 | Soybean | plastid | 75.53 | 30.13 |
| EES12962 | Sorghum | plastid | 65.82 | 27.61 |
| Zm00001d002086_P001 | Maize | plastid | 65.4 | 27.53 |
| HORVU2Hr1G114330.1 | Barley | cytosol | 63.29 | 26.79 |
| GSMUA_Achr7P17050_001 | Banana | plastid | 58.65 | 26.63 |
| Os04t0647300-01 | Rice | nucleus | 66.24 | 26.57 |
| Solyc08g048410.1.1 | Tomato | cytosol | 18.14 | 25.75 |
| Solyc08g068810.2.1 | Tomato | cytosol | 58.23 | 25.14 |
| Solyc09g015610.1.1 | Tomato | cytosol | 11.81 | 22.22 |
| Solyc08g048310.1.1 | Tomato | extracellular, vacuole | 18.57 | 20.37 |
| Solyc09g017980.1.1 | Tomato | extracellular | 13.92 | 15.94 |
| Solyc01g105240.2.1 | Tomato | nucleus | 23.63 | 15.3 |
| Solyc04g056290.2.1 | Tomato | nucleus | 23.21 | 14.91 |
| Solyc09g015580.1.1 | Tomato | vacuole | 18.57 | 14.15 |
| Solyc09g015600.1.1 | Tomato | extracellular | 17.72 | 13.46 |
| Solyc09g017990.1.1 | Tomato | plastid | 24.47 | 12.16 |
| Solyc08g005080.1.1 | Tomato | cytosol | 24.47 | 11.96 |
| Solyc10g047480.1.1 | Tomato | nucleus | 23.63 | 11.67 |
| Solyc02g005600.1.1 | Tomato | vacuole | 23.21 | 11.27 |
| Solyc08g021830.1.1 | Tomato | cytosol | 15.61 | 10.57 |
| Solyc08g021790.1.1 | Tomato | extracellular, vacuole | 10.13 | 10.26 |
| Solyc08g023360.1.1 | Tomato | extracellular | 10.13 | 9.45 |
| Solyc12g096430.1.1 | Tomato | nucleus, plastid | 24.47 | 9.32 |
| Solyc01g068240.2.1 | Tomato | cytosol | 20.25 | 9.01 |
| Solyc08g076910.2.1 | Tomato | nucleus | 26.16 | 8.68 |
| Solyc07g056520.2.1 | Tomato | cytosol, golgi, nucleus, plastid | 23.63 | 8.16 |
| Solyc11g065210.1.1 | Tomato | cytosol | 17.72 | 7.87 |
| Solyc08g069050.2.1 | Tomato | extracellular | 21.52 | 6.56 |
| Solyc07g005530.2.1 | Tomato | nucleus | 24.05 | 6.18 |
| Solyc07g061780.2.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 21.94 | 5.38 |
| Solyc04g076210.2.1 | Tomato | nucleus | 22.78 | 4.91 |
Protein Annotations
| MapMan:15.3.4.2.2 | MapMan:19.2.3.1.1.8 | Gene3D:3.90.70.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006464 |
| GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016579 |
| GO:GO:0016787 | GO:GO:0019538 | GO:GO:0036459 | InterPro:IPR028889 | UniProt:K4CBN4 | PFAM:PF00443 |
| ScanProsite:PS00973 | PFscan:PS50235 | PANTHER:PTHR43961 | PANTHER:PTHR43961:SF3 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C19_UCH |
| SUPFAM:SSF54001 | EnsemblPlantsGene:Solyc07g007640.1 | EnsemblPlants:Solyc07g007640.1.1 | UniParc:UPI000276ADFD | InterPro:USP_CS | InterPro:USP_dom |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr7:+:2296050..2296763
Molecular Weight (calculated)
27261.6 Da
IEP (calculated)
8.763
GRAVY (calculated)
-0.496
Length
237 amino acids
Sequence
(BLAST)
(BLAST)
001: MCTACGFTST TYDPCIDISL DLELSQGTSA KVTSKKSHKS HKKKEAEPGK SSQNGRLSTL MGCLDHFTRP EKLGSDQKFF CQHCQVRQES LKQMSIRKLP
101: LVSCFHIKRF EHSVIKKMSR KVDHYLQFPF SLDMSPYLSS SILRSRFGNR IFPFEGDDQD TSCETSSEFE LFAVITHTGK LDAGHYVTYL RLSNQWYKCD
201: DAWITQVSEN IVRAAQGYMM FYVQKMLYYK ASEKQVS
101: LVSCFHIKRF EHSVIKKMSR KVDHYLQFPF SLDMSPYLSS SILRSRFGNR IFPFEGDDQD TSCETSSEFE LFAVITHTGK LDAGHYVTYL RLSNQWYKCD
201: DAWITQVSEN IVRAAQGYMM FYVQKMLYYK ASEKQVS
001: MSVKSGADVV AVRSNKKRRL DSQLIIGSNF LVSPRDRREK WTFPLGLRGL NNLGSTCFMN AVLQALVHAP PLRNFWLSGQ HNRDLCPRRT MGLLCLPCDL
101: DVIFSAMFSG DRTPYSPAHL LYSWWQHSTN LATYEQQDSH EFFISLLDRI HENEGKSKCL YQDNEECQCI THKAFSGLLR SDVTCTTCGS TSTTYDPFID
201: ISLTLDSMNG FSPADCRKNR YSGGPSVNAI MPTLSGCLDF FTRSEKLGPD QKLNCQSCGE KRESSKQMSI RRLPLLLCLH VKRFEHSLTR KTSRKIDSYL
301: QYPFRLNMSP YLSSSIIGKR FGNRIFAFDG EGEYDSSSSS SPSAEFEIFA VVTHKGMLES GHYVTYLRLK GLWYRCDDAW INEVEEEVVR GCECYMLFYA
401: QETVIQKAHK ELSYQVISMA DAFPFADC
101: DVIFSAMFSG DRTPYSPAHL LYSWWQHSTN LATYEQQDSH EFFISLLDRI HENEGKSKCL YQDNEECQCI THKAFSGLLR SDVTCTTCGS TSTTYDPFID
201: ISLTLDSMNG FSPADCRKNR YSGGPSVNAI MPTLSGCLDF FTRSEKLGPD QKLNCQSCGE KRESSKQMSI RRLPLLLCLH VKRFEHSLTR KTSRKIDSYL
301: QYPFRLNMSP YLSSSIIGKR FGNRIFAFDG EGEYDSSSSS SPSAEFEIFA VVTHKGMLES GHYVTYLRLK GLWYRCDDAW INEVEEEVVR GCECYMLFYA
401: QETVIQKAHK ELSYQVISMA DAFPFADC
Arabidopsis Description
UBP22Ubiquitinyl hydrolase 1 [Source:UniProtKB/TrEMBL;Acc:A0A178UPE9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.