Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- golgi 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400032703 | Potato | nucleus | 98.09 | 98.09 |
| GSMUA_Achr10P... | Banana | cytosol | 83.06 | 88.12 |
| KRH31299 | Soybean | nucleus | 88.25 | 87.53 |
| KRH59329 | Soybean | nucleus | 87.7 | 86.99 |
| KRG97572 | Soybean | nucleus | 87.43 | 86.72 |
| KRH43175 | Soybean | nucleus | 87.43 | 86.72 |
| Solyc04g056290.2.1 | Tomato | nucleus | 85.52 | 84.82 |
| GSMUA_Achr8P14390_001 | Banana | cytosol | 84.43 | 84.43 |
| GSMUA_Achr7P19160_001 | Banana | mitochondrion | 67.49 | 80.98 |
| GSMUA_Achr10P... | Banana | nucleus | 81.97 | 80.21 |
| VIT_09s0070g00500.t01 | Wine grape | golgi, mitochondrion, nucleus, peroxisome | 78.42 | 80.17 |
| Solyc08g048410.1.1 | Tomato | cytosol | 12.02 | 26.35 |
| Solyc07g007640.1.1 | Tomato | cytosol | 15.3 | 23.63 |
| Solyc09g015580.1.1 | Tomato | vacuole | 18.03 | 21.22 |
| Solyc09g015610.1.1 | Tomato | cytosol | 7.1 | 20.63 |
| Solyc09g015600.1.1 | Tomato | extracellular | 17.49 | 20.51 |
| Solyc08g048310.1.1 | Tomato | extracellular, vacuole | 12.02 | 20.37 |
| Solyc09g017980.1.1 | Tomato | extracellular | 10.93 | 19.32 |
| Solyc10g047480.1.1 | Tomato | nucleus | 24.32 | 18.54 |
| Solyc08g005080.1.1 | Tomato | cytosol | 24.32 | 18.35 |
| Solyc11g065210.1.1 | Tomato | cytosol | 25.41 | 17.42 |
| Solyc09g017990.1.1 | Tomato | plastid | 22.13 | 16.98 |
| Solyc08g068810.2.1 | Tomato | cytosol | 24.86 | 16.58 |
| Solyc01g068240.2.1 | Tomato | cytosol | 24.04 | 16.51 |
| Solyc08g021790.1.1 | Tomato | extracellular, vacuole | 10.38 | 16.24 |
| Solyc02g005600.1.1 | Tomato | vacuole | 21.58 | 16.19 |
| Solyc08g021830.1.1 | Tomato | cytosol | 15.3 | 16.0 |
| Solyc08g023360.1.1 | Tomato | extracellular | 10.66 | 15.35 |
| Solyc12g096430.1.1 | Tomato | nucleus, plastid | 24.32 | 14.31 |
| Solyc07g056520.2.1 | Tomato | cytosol, golgi, nucleus, plastid | 25.68 | 13.7 |
| Solyc08g076910.2.1 | Tomato | nucleus | 25.96 | 13.31 |
| Solyc08g069050.2.1 | Tomato | extracellular | 25.41 | 11.97 |
| Solyc07g061780.2.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 28.14 | 10.66 |
| Solyc07g005530.2.1 | Tomato | nucleus | 25.14 | 9.97 |
| Solyc04g076210.2.1 | Tomato | nucleus | 25.68 | 8.55 |
Protein Annotations
| MapMan:19.2.3.1.1.2 | Gene3D:3.90.70.10 | MEROPS:C19.008 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006464 |
| GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016579 |
| GO:GO:0016787 | GO:GO:0019538 | GO:GO:0036459 | InterPro:IPR028889 | UniProt:K4B294 | PFAM:PF00443 |
| ScanProsite:PS00972 | ScanProsite:PS00973 | PFscan:PS50235 | PANTHER:PTHR43942 | PANTHER:PTHR43942:SF2 | InterPro:Papain_like_cys_pep_sf |
| InterPro:Peptidase_C19_UCH | SUPFAM:SSF54001 | EnsemblPlantsGene:Solyc01g105240.2 | EnsemblPlants:Solyc01g105240.2.1 | UniParc:UPI0002768D90 | InterPro:USP_CS |
| InterPro:USP_dom | : | : | : | : | : |
Description
No Description!
Coordinates
chr1:-:93476218..93480888
Molecular Weight (calculated)
41739.2 Da
IEP (calculated)
6.321
GRAVY (calculated)
-0.461
Length
366 amino acids
Sequence
(BLAST)
(BLAST)
001: MGATGSKLEK ALGDQFPEGE RYFGLENFGN TCYCNSVLQA LYFCVPFREQ LLEYYANNKG PPEAEENLLT CLAELFSQIS SQRKKTGVIA PRRFVQRVRK
101: QNELFRGYMH QDAHEFLNFL LNELVDILEK ESHGAKSSAA TSPEKVSNGT CNGHANDVKE EPLVTWVHKN FQGILTNETR CLRCETVTAR DETFFDLSLD
201: IEQNSSITSC LKNFSSTETL NAEDKFFCDK CCSLQEAQKR MKIKKPPHIL VIHLKRFKYM EQLGRYKKLS YRVVFPLELK LSNTTENTDS EYSLFAVVVH
301: VGSGPNHGHY VSLVKSHNHW LFFDDENAEI IDESAVQTFF GSAQEYSSNT DHGYILFYES LAASKS
101: QNELFRGYMH QDAHEFLNFL LNELVDILEK ESHGAKSSAA TSPEKVSNGT CNGHANDVKE EPLVTWVHKN FQGILTNETR CLRCETVTAR DETFFDLSLD
201: IEQNSSITSC LKNFSSTETL NAEDKFFCDK CCSLQEAQKR MKIKKPPHIL VIHLKRFKYM EQLGRYKKLS YRVVFPLELK LSNTTENTDS EYSLFAVVVH
301: VGSGPNHGHY VSLVKSHNHW LFFDDENAEI IDESAVQTFF GSAQEYSSNT DHGYILFYES LAASKS
001: MGAAGSKLEK ALGDQFPEGE RYFGFENFGN TCYCNSVLQA LYFCVPFREQ LLEYYTSNKS VADAEENLMT CLADLFSQIS SQKKKTGVIA PKRFVQRLKK
101: QNELFRSYMH QDAHEFLNYL LNEVVDILEK EAKATKTEHE TSSSSSPEKI ANGLKVPQAN GVVHKEPIVT WVHNIFQGIL TNETRCLRCE TVTARDETFL
201: DLSLDIEQNS SITSCLKNFS STETLHAEDK FFCDKCCSLQ EAQKRMKIKK PPHILVIHLK RFKYIEQLGR YKKLSYRVVF PLELKLSNTV EPYADVEYSL
301: FAVVVHVGSG PNHGHYVSLV KSHNHWLFFD DENVEMIEES AVQTFFGSSQ EYSSNTDHGY ILFYESLGPT K
101: QNELFRSYMH QDAHEFLNYL LNEVVDILEK EAKATKTEHE TSSSSSPEKI ANGLKVPQAN GVVHKEPIVT WVHNIFQGIL TNETRCLRCE TVTARDETFL
201: DLSLDIEQNS SITSCLKNFS STETLHAEDK FFCDKCCSLQ EAQKRMKIKK PPHILVIHLK RFKYIEQLGR YKKLSYRVVF PLELKLSNTV EPYADVEYSL
301: FAVVVHVGSG PNHGHYVSLV KSHNHWLFFD DENVEMIEES AVQTFFGSSQ EYSSNTDHGY ILFYESLGPT K
Arabidopsis Description
UBP3Ubiquitin carboxyl-terminal hydrolase 3 [Source:UniProtKB/Swiss-Prot;Acc:O24454]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.