Subcellular Localization
min:
: max
Winner_takes_all: extracellular, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 2
- extracellular 4
- endoplasmic reticulum 3
- vacuole 4
- plasma membrane 3
- golgi 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc08g023360.1.1 | Tomato | extracellular | 79.91 | 73.62 |
| Solyc08g021830.1.1 | Tomato | cytosol | 75.21 | 50.29 |
| Solyc09g015580.1.1 | Tomato | vacuole | 49.57 | 37.3 |
| Solyc09g015600.1.1 | Tomato | extracellular | 49.57 | 37.18 |
| Solyc08g048310.1.1 | Tomato | extracellular, vacuole | 26.5 | 28.7 |
| Solyc09g017980.1.1 | Tomato | extracellular | 25.21 | 28.5 |
| Solyc10g047480.1.1 | Tomato | nucleus | 52.99 | 25.83 |
| Solyc09g017990.1.1 | Tomato | plastid | 52.14 | 25.58 |
| Solyc08g005080.1.1 | Tomato | cytosol | 52.14 | 25.15 |
| Solyc02g005600.1.1 | Tomato | vacuole | 50.0 | 23.98 |
| Solyc08g048410.1.1 | Tomato | cytosol | 17.09 | 23.95 |
| Solyc09g015610.1.1 | Tomato | cytosol | 11.97 | 22.22 |
| Solyc08g076910.2.1 | Tomato | nucleus | 46.58 | 15.27 |
| GSMUA_Achr4P19070_001 | Banana | cytosol, golgi, mitochondrion, plastid | 22.65 | 15.06 |
| VIT_02s0012g01340.t01 | Wine grape | nucleus | 30.34 | 13.52 |
| KRH39541 | Soybean | nucleus | 40.17 | 12.72 |
| KRH74417 | Soybean | nucleus | 38.46 | 12.45 |
| Bra021031.1-P | Field mustard | nucleus | 33.33 | 12.15 |
| CDX76553 | Canola | cytosol | 33.33 | 12.15 |
| AT4G17895.1 | Thale cress | nucleus | 34.62 | 11.65 |
| CDX87681 | Canola | nucleus | 30.77 | 11.43 |
| CDY37145 | Canola | cytosol | 31.62 | 11.11 |
| Bra022060.1-P | Field mustard | nucleus | 31.2 | 10.98 |
| GSMUA_Achr5P13990_001 | Banana | endoplasmic reticulum | 27.35 | 10.92 |
| Zm00001d051513_P001 | Maize | nucleus | 27.35 | 10.83 |
| Solyc01g105240.2.1 | Tomato | nucleus | 16.24 | 10.38 |
| CDY58499 | Canola | endoplasmic reticulum | 31.62 | 10.26 |
| Bra025000.1-P | Field mustard | endoplasmic reticulum | 31.62 | 10.15 |
| Solyc07g007640.1.1 | Tomato | cytosol | 10.26 | 10.13 |
| Solyc04g056290.2.1 | Tomato | nucleus | 15.81 | 10.03 |
| CDX77686 | Canola | endoplasmic reticulum | 31.2 | 9.67 |
| AT5G46740.1 | Thale cress | nucleus, plastid | 29.06 | 9.29 |
| Zm00001d017686_P002 | Maize | mitochondrion, nucleus | 27.78 | 8.78 |
| OQU85579 | Sorghum | nucleus | 26.92 | 8.46 |
| TraesCS6A01G264800.1 | Wheat | nucleus | 26.5 | 8.45 |
| TraesCS6B01G291800.1 | Wheat | nucleus | 26.5 | 8.39 |
| TraesCS6D01G250100.1 | Wheat | nucleus | 26.5 | 8.39 |
| Solyc08g068810.2.1 | Tomato | cytosol | 19.23 | 8.2 |
| HORVU6Hr1G067180.4 | Barley | nucleus | 25.64 | 8.12 |
| Solyc12g096430.1.1 | Tomato | nucleus, plastid | 19.66 | 7.4 |
| Solyc07g056520.2.1 | Tomato | cytosol, golgi, nucleus, plastid | 20.51 | 7.0 |
| Solyc01g068240.2.1 | Tomato | cytosol | 15.81 | 6.94 |
| Solyc11g065210.1.1 | Tomato | cytosol | 14.96 | 6.55 |
| Solyc08g069050.2.1 | Tomato | extracellular | 20.09 | 6.05 |
| Solyc07g005530.2.1 | Tomato | nucleus | 23.08 | 5.85 |
| Solyc07g061780.2.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 19.66 | 4.76 |
| Solyc04g076210.2.1 | Tomato | nucleus | 20.09 | 4.28 |
Protein Annotations
| EnsemblPlants:Solyc08g021790.1.1 | EnsemblPlantsGene:Solyc08g021790.1 | Gene3D:3.90.70.10 | InterPro:Papain_like_cys_pep_sf | PANTHER:PTHR44033 | PANTHER:PTHR44033:SF1 |
| SUPFAM:SSF54001 | UniParc:UPI000276B88E | UniProt:K4CJJ9 | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr8:-:34979569..34981469
Molecular Weight (calculated)
27080.2 Da
IEP (calculated)
5.555
GRAVY (calculated)
-0.063
Length
234 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNLGNTCFV NAVVQSFMQT IVLFKLLGSI DHISPCDNKF SPDFSWYQQE DSHEFLYCSL NKLENCFYNL ELQICGGGLW WCKTHGPFEK QLLVYRAPFV
101: ASLDFEIFKN NGLVVNKVYK YVSFSLELDM LLYTSKINNV VFVEEDFVLA KEAYIIFYAK RGTPWFFDYI QIHNPFIKLV VPTSPCFPNN HAFHVGESNN
201: GDEETSMKYE HNKTNDSDSR GKLIFYSISA FSLF
101: ASLDFEIFKN NGLVVNKVYK YVSFSLELDM LLYTSKINNV VFVEEDFVLA KEAYIIFYAK RGTPWFFDYI QIHNPFIKLV VPTSPCFPNN HAFHVGESNN
201: GDEETSMKYE HNKTNDSDSR GKLIFYSISA FSLF
001: MLMAKPDVPS SILPRSSSIL PNSIETLDEN ESIEAQVNNV QSLALSSPNR DRSDDDDNNN NHDSVSIPPP IYDGYSSSSS DESQSVPSPP INLDHDDDEC
101: QIPIRNTSQA LDDIDDDIWG DDDLPETRRP WTPNVSPGFG SDDDDDNDDD NSKNEPRKSL FYGFRQEPEP VTGVGAGLWN LGNSCFLNSV FQCFTHTVPL
201: IESLLSFRYE VPCHCGNEFF CVIRAIRYHI EAALRPERCP IAPYFFFDNL NYFSPDFQRY QQEDAHEFLQ AFLEKLEICG SDRTSFRGDI TSQDVFSGRL
301: ISGLRCCNCD YVSETYEKSV GLSLEIEDVD TLGSALESFT RVEKLDEQLT CDNCNEKVSK EKQLLLDKLP LVATFHLKRF KNNGLYMEKI YKHVKIPLEI
401: DLQPYMRNIQ ENEVSTKYHL YALVEHFGYS VAYGHYSSYV RSAPKIWHHF DDSKVTRIDE DMVLSQDSYI LFYAREGTRW FSSVYEEMQP LVEASLLNSS
501: PKSVLDSSTN GECLSEISYE NGDKASKPCD SAGVCNQHVK TKEDFVSLSN DDVFLSAESS SGEESPMGEL LDPLDPDDSY SPCTEKESDS CLAIERATIR
601: DDFFPLLLDQ NQESSTSSPK LQERTFEMQL LQMEETTKSQ EPWKQPLSSI SNIADSMEAE FVYGDLMKKP SPRARELLDQ AISTNGSPPK KLKTT
101: QIPIRNTSQA LDDIDDDIWG DDDLPETRRP WTPNVSPGFG SDDDDDNDDD NSKNEPRKSL FYGFRQEPEP VTGVGAGLWN LGNSCFLNSV FQCFTHTVPL
201: IESLLSFRYE VPCHCGNEFF CVIRAIRYHI EAALRPERCP IAPYFFFDNL NYFSPDFQRY QQEDAHEFLQ AFLEKLEICG SDRTSFRGDI TSQDVFSGRL
301: ISGLRCCNCD YVSETYEKSV GLSLEIEDVD TLGSALESFT RVEKLDEQLT CDNCNEKVSK EKQLLLDKLP LVATFHLKRF KNNGLYMEKI YKHVKIPLEI
401: DLQPYMRNIQ ENEVSTKYHL YALVEHFGYS VAYGHYSSYV RSAPKIWHHF DDSKVTRIDE DMVLSQDSYI LFYAREGTRW FSSVYEEMQP LVEASLLNSS
501: PKSVLDSSTN GECLSEISYE NGDKASKPCD SAGVCNQHVK TKEDFVSLSN DDVFLSAESS SGEESPMGEL LDPLDPDDSY SPCTEKESDS CLAIERATIR
601: DDFFPLLLDQ NQESSTSSPK LQERTFEMQL LQMEETTKSQ EPWKQPLSSI SNIADSMEAE FVYGDLMKKP SPRARELLDQ AISTNGSPPK KLKTT
Arabidopsis Description
UBP20Ubiquitin carboxyl-terminal hydrolase 20 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPS7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.