Factsheet for Solyc08g068810.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400038315	Potato	nucleus	76.87	94.2
PGSC0003DMT400086994	Potato	cytosol	19.85	81.95
VIT_04s0008g06860.t01	Wine grape	nucleus	68.31	67.81
GSMUA_Achr7P05330_001	Banana	cytosol	36.07	62.07
KRH15753	Soybean	nucleus	62.3	61.73
KRH05289	Soybean	nucleus	61.75	61.08
Solyc07g007640.1.1	Tomato	cytosol	25.14	58.23
Bra028566.1-P	Field mustard	cytosol	51.73	56.35
AT5G10790.1	Thale cress	cytosol	54.83	54.04
CDY40119	Canola	nucleus	54.46	51.2
CDX85744	Canola	cytosol	54.1	51.03
Solyc08g048410.1.1	Tomato	cytosol	7.83	25.75
Solyc04g056290.2.1	Tomato	nucleus	16.76	24.93
Solyc01g105240.2.1	Tomato	nucleus	16.58	24.86
Solyc09g015610.1.1	Tomato	cytosol	5.1	22.22
Solyc09g015580.1.1	Tomato	vacuole	12.39	21.86
Solyc09g017980.1.1	Tomato	extracellular	8.2	21.74
Solyc08g048310.1.1	Tomato	extracellular, vacuole	8.38	21.3
Solyc08g023360.1.1	Tomato	extracellular	9.84	21.26
Solyc09g015600.1.1	Tomato	extracellular	11.84	20.83
Solyc08g021790.1.1	Tomato	extracellular, vacuole	8.2	19.23
Solyc08g005080.1.1	Tomato	cytosol	16.76	18.97
Solyc10g047480.1.1	Tomato	nucleus	16.03	18.33
Solyc08g021830.1.1	Tomato	cytosol	11.66	18.29
Solyc09g017990.1.1	Tomato	plastid	15.85	18.24
Solyc12g096430.1.1	Tomato	nucleus, plastid	20.58	18.17
Solyc02g005600.1.1	Tomato	vacuole	15.12	17.01
Solyc01g068240.2.1	Tomato	cytosol	16.03	16.51
Solyc11g065210.1.1	Tomato	cytosol	15.12	15.54
Solyc08g076910.2.1	Tomato	nucleus	19.13	14.71
Solyc07g056520.2.1	Tomato	cytosol, golgi, nucleus, plastid	18.21	14.58
Solyc08g069050.2.1	Tomato	extracellular	20.58	14.54
Solyc07g061780.2.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	20.95	11.9
Solyc07g005530.2.1	Tomato	nucleus	19.31	11.48
Solyc04g076210.2.1	Tomato	nucleus	21.31	10.65

Protein Annotations

MapMan:15.3.4.2.2	MapMan:19.2.3.1.1.8	Gene3D:3.30.40.10	Gene3D:3.90.70.10	MEROPS:C19.A11	GO:GO:0003674
GO:GO:0003676	GO:GO:0003824	GO:GO:0005488	GO:GO:0006464	GO:GO:0006508	GO:GO:0006511
GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0008234	GO:GO:0008270	GO:GO:0009056
GO:GO:0009987	GO:GO:0016579	GO:GO:0016787	GO:GO:0019538	GO:GO:0036459	GO:GO:0046872
InterPro:IPR001607	InterPro:IPR013083	InterPro:IPR013087	InterPro:IPR028889	UniProt:K4CMA3	PFAM:PF00443
PFAM:PF02148	ScanProsite:PS00028	ScanProsite:PS00972	PFscan:PS50235	PFscan:PS50271	PANTHER:PTHR43961
PANTHER:PTHR43961:SF3	InterPro:Papain_like_cys_pep_sf	InterPro:Peptidase_C19_UCH	SUPFAM:SSF54001	SUPFAM:SSF57850	EnsemblPlantsGene:Solyc08g068810.2
EnsemblPlants:Solyc08g068810.2.1	UniParc:UPI000276ACB2	InterPro:USP_CS	InterPro:USP_dom	InterPro:Znf_C2H2_type	InterPro:Znf_RING/FYVE/PHD
InterPro:Znf_UBP	SEG:seg	:	:	:	:

Description

Ubiquitin carboxyl-terminal hydrolase 22 [Source:Projected from Arabidopsis thaliana (AT5G10790) UniProtKB/Swiss-Prot;Acc:Q9LEW0]

Coordinates

chr8:+:57912789..57915689

Molecular Weight (calculated)

63342.7 Da

IEP (calculated)

7.185

GRAVY (calculated)

-0.373

Length

549 amino acids

Sequence
(BLAST)

001: MYSSNDLYTN PKPCKHLAEY KVKNGVCGYN LIQDCFRTTP YGRTTLEMSK LEIPRCSVCS GSQGRFYMCL ICSSVFCCLS PESNHALLHI QSQDGHEILV
101: DMERAELYCS VCCDQVYDPD FDKAVMCKHI RGFSRSENGV EESEMRLSKR RKLSFWMDLD SKNMKRLFFR KSKSCYPLGL RGLNNLGNTC FMNSVLQVLL
201: HAPPLRNYFL SDRHNREICR NMSSDRLCLP CDIDLMFSAV FSGDRTPYSP AQFLYSWWQH SENHATYEQQ DAHEFFISML DKIHDKEGKA SLAIKDNREC
301: QCIAHRAFYG LLRSDVTCAS CGFTSTTHDP CMDVSLDLSP CNSSRVDFAS KSSKANESLL GCLDLFTRPE KLGSDQKLYC ENCHEKQDAL KQMSIRKLPL
401: VLCFHIKRFE HSPTRKMSRK IDRHVQFPFS LDMKPYLSSS IVRERYGSRI FSFDGDESDV STEFEIFAVV AHSGMLESGH YVTYLHLINQ WYKCDDAWIT
501: EVDEEVVRAS QCYLIYYVQK MLYHKSCEDV SCQPMSLRAD TFVRITGCC

Best Arabidopsis Sequence Match ( AT5G10790.1 )
(BLAST)

001: MSARISFLKN PDPCNHLSDY KLRYGTDGYK SFNNLFRCFN DARIKIKLQG IDIPRCSYCS VYQKRLYICL ICRSISCSSH ILLHTQLNKG HDIAIDVERS
101: ELYCCACIDQ VYDSEFDEVV VSKQLFGLGM SVKSGADVVA VRSNKKRRLD SQLIIGSNFL VSPRDRREKW TFPLGLRGLN NLGSTCFMNA VLQALVHAPP
201: LRNFWLSGQH NRDLCPRRTM GLLCLPCDLD VIFSAMFSGD RTPYSPAHLL YSWWQHSTNL ATYEQQDSHE FFISLLDRIH ENEGKSKCLY QDNEECQCIT
301: HKAFSGLLRS DVTCTTCGST STTYDPFIDI SLTLDSMNGF SPADCRKNRY SGGPSVNAIM PTLSGCLDFF TRSEKLGPDQ KLNCQSCGEK RESSKQMSIR
401: RLPLLLCLHV KRFEHSLTRK TSRKIDSYLQ YPFRLNMSPY LSSSIIGKRF GNRIFAFDGE GEYDSSSSSS PSAEFEIFAV VTHKGMLESG HYVTYLRLKG
501: LWYRCDDAWI NEVEEEVVRG CECYMLFYAQ ETVIQKAHKE LSYQVISMAD AFPFADC

Arabidopsis Description

UBP22Ubiquitinyl hydrolase 1 [Source:UniProtKB/TrEMBL;Acc:A0A178UPE9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.