Factsheet for Solyc09g015600.1.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 2
extracellular 5
endoplasmic reticulum 3
vacuole 4
plasma membrane 3
golgi 3
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g015580.1.1	Tomato	vacuole	82.05	82.32
Solyc09g017990.1.1	Tomato	plastid	89.42	58.49
Solyc09g017980.1.1	Tomato	extracellular	37.5	56.52
Solyc08g048310.1.1	Tomato	extracellular, vacuole	36.22	52.31
Solyc08g048410.1.1	Tomato	cytosol	27.24	50.9
Solyc08g021790.1.1	Tomato	extracellular, vacuole	37.18	49.57
Solyc08g023360.1.1	Tomato	extracellular	37.18	45.67
Solyc02g005600.1.1	Tomato	vacuole	64.74	41.39
Solyc09g015610.1.1	Tomato	cytosol	16.35	40.48
Solyc08g021830.1.1	Tomato	cytosol	45.19	40.29
Solyc08g005080.1.1	Tomato	cytosol	60.58	38.97
Solyc10g047480.1.1	Tomato	nucleus	53.85	35.0
PGSC0003DMT400093591	Potato	cytosol	25.32	31.47
GSMUA_Achr4P19070_001	Banana	cytosol, golgi, mitochondrion, plastid	31.73	28.12
VIT_02s0012g01340.t01	Wine grape	nucleus	37.5	22.29
Solyc08g076910.2.1	Tomato	nucleus	48.72	21.29
Bra021031.1-P	Field mustard	nucleus	39.74	19.31
CDX76553	Canola	cytosol	39.74	19.31
GSMUA_Achr5P13990_001	Banana	endoplasmic reticulum	35.26	18.77
CDX87681	Canola	nucleus	37.18	18.41
CDY37145	Canola	cytosol	38.78	18.17
KRH39541	Soybean	nucleus	42.95	18.13
Zm00001d051513_P001	Maize	nucleus	34.29	18.1
KRH74417	Soybean	nucleus	41.35	17.84
Bra022060.1-P	Field mustard	nucleus	37.82	17.74
Solyc07g007640.1.1	Tomato	cytosol	13.46	17.72
AT4G17895.1	Thale cress	nucleus	39.1	17.55
Solyc01g105240.2.1	Tomato	nucleus	20.51	17.49
Solyc04g056290.2.1	Tomato	nucleus	20.19	17.07
CDY58499	Canola	endoplasmic reticulum	39.1	16.92
Bra025000.1-P	Field mustard	endoplasmic reticulum	39.1	16.74
CDX77686	Canola	endoplasmic reticulum	38.78	16.03
AT5G46740.1	Thale cress	nucleus, plastid	37.5	15.98
OQU85579	Sorghum	nucleus	35.26	14.77
TraesCS6B01G291800.1	Wheat	nucleus	34.94	14.75
TraesCS6A01G264800.1	Wheat	nucleus	34.62	14.71
TraesCS6D01G250100.1	Wheat	nucleus	34.62	14.61
HORVU6Hr1G067180.4	Barley	nucleus	34.29	14.48
Zm00001d017686_P002	Maize	mitochondrion, nucleus	33.65	14.19
Solyc12g096430.1.1	Tomato	nucleus, plastid	24.68	12.38
Solyc08g068810.2.1	Tomato	cytosol	20.83	11.84
Solyc07g056520.2.1	Tomato	cytosol, golgi, nucleus, plastid	25.96	11.81
Solyc11g065210.1.1	Tomato	cytosol	20.19	11.8
Solyc01g068240.2.1	Tomato	cytosol	19.87	11.63
Solyc07g005530.2.1	Tomato	nucleus	31.09	10.51
Solyc08g069050.2.1	Tomato	extracellular	24.68	9.91
Solyc07g061780.2.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	23.4	7.56
Solyc04g076210.2.1	Tomato	nucleus	23.4	6.64

Protein Annotations

Gene3D:3.90.70.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016579	GO:GO:0016787	GO:GO:0019538	GO:GO:0036459
InterPro:IPR028889	UniProt:K4CS31	PFAM:PF00443	PFscan:PS50235	PANTHER:PTHR44033	PANTHER:PTHR44033:SF1
InterPro:Papain_like_cys_pep_sf	InterPro:Peptidase_C19_UCH	SUPFAM:SSF54001	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc09g015600.1	EnsemblPlants:Solyc09g015600.1.1
UniParc:UPI000276BF12	InterPro:USP_dom	:	:	:	:

Description

No Description!

Coordinates

chr9:+:10262256..10264410

Molecular Weight (calculated)

35806.9 Da

IEP (calculated)

5.574

GRAVY (calculated)

-0.202

Length

312 amino acids

Sequence
(BLAST)

001: MRNLGNTCFL NVIVQSFMHT VVLLQLLRSI SHVSPCLNFS SHFNMNKKED AQEFLQCFLN KLEICCNYLD TEENIVQEAF GGRLVSKLRC CNCGYSSITR
101: EPLIDLSLEI EDVDSLSATQ GPLEKKLLVD HSPNVVVLHL KRFKYNGLVV QKVEKHVSFS LELDMLLYSN AINNVEIKYD LYAVILHSGP SISSTHYYNF
201: IRCVDYVQED LVLTEQAYIL FYTKRGTPWL SDYIQSYRPF LCLVNPTTTN NANESTLMPE VNNVEDNDSH DKVYCEDQLQ VVEIKQYEKL KDAVNCGSHG
301: TSVNEMKRKL KD

Best Arabidopsis Sequence Match ( AT4G17895.1 )
(BLAST)

001: MLMAKPDVPS SILPRSSSIL PNSIETLDEN ESIEAQVNNV QSLALSSPNR DRSDDDDNNN NHDSVSIPPP IYDGYSSSSS DESQSVPSPP INLDHDDDEC
101: QIPIRNTSQA LDDIDDDIWG DDDLPETRRP WTPNVSPGFG SDDDDDNDDD NSKNEPRKSL FYGFRQEPEP VTGVGAGLWN LGNSCFLNSV FQCFTHTVPL
201: IESLLSFRYE VPCHCGNEFF CVIRAIRYHI EAALRPERCP IAPYFFFDNL NYFSPDFQRY QQEDAHEFLQ AFLEKLEICG SDRTSFRGDI TSQDVFSGRL
301: ISGLRCCNCD YVSETYEKSV GLSLEIEDVD TLGSALESFT RVEKLDEQLT CDNCNEKVSK EKQLLLDKLP LVATFHLKRF KNNGLYMEKI YKHVKIPLEI
401: DLQPYMRNIQ ENEVSTKYHL YALVEHFGYS VAYGHYSSYV RSAPKIWHHF DDSKVTRIDE DMVLSQDSYI LFYAREGTRW FSSVYEEMQP LVEASLLNSS
501: PKSVLDSSTN GECLSEISYE NGDKASKPCD SAGVCNQHVK TKEDFVSLSN DDVFLSAESS SGEESPMGEL LDPLDPDDSY SPCTEKESDS CLAIERATIR
601: DDFFPLLLDQ NQESSTSSPK LQERTFEMQL LQMEETTKSQ EPWKQPLSSI SNIADSMEAE FVYGDLMKKP SPRARELLDQ AISTNGSPPK KLKTT

Arabidopsis Description

UBP20Ubiquitin carboxyl-terminal hydrolase 20 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPS7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.