Factsheet for HORVU6Hr1G067180.4

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G250100.1	Wheat	nucleus	92.29	92.29
TraesCS6A01G264800.1	Wheat	nucleus	91.47	92.1
TraesCS6B01G291800.1	Wheat	nucleus	91.34	91.34
Zm00001d051513_P001	Maize	nucleus	51.56	64.47
OQU85579	Sorghum	nucleus	61.7	61.21
Zm00001d017686_P002	Maize	mitochondrion, nucleus	57.1	57.03
GSMUA_Achr4P19070_001	Banana	cytosol, golgi, mitochondrion, plastid	23.0	48.3
GSMUA_Achr5P13990_001	Banana	endoplasmic reticulum	30.72	38.74
PGSC0003DMT400093121	Potato	cytosol	14.07	35.99
Solyc08g048410.1.1	Tomato	cytosol	7.85	34.73
Solyc09g015600.1.1	Tomato	extracellular	14.48	34.29
VIT_02s0012g01340.t01	Wine grape	nucleus	24.36	34.29
Solyc09g015580.1.1	Tomato	vacuole	14.34	34.08
Solyc10g047480.1.1	Tomato	nucleus	20.03	30.83
Solyc08g005080.1.1	Tomato	cytosol	20.16	30.72
PGSC0003DMT400046008	Potato	cytosol	21.11	29.38
Solyc08g048310.1.1	Tomato	extracellular, vacuole	8.53	29.17
Solyc09g017990.1.1	Tomato	plastid	18.81	29.14
Solyc09g017980.1.1	Tomato	extracellular	8.12	28.99
PGSC0003DMT400045160	Potato	nucleus	27.88	28.93
Solyc08g076910.2.1	Tomato	nucleus	27.33	28.29
Solyc08g021830.1.1	Tomato	cytosol	13.4	28.29
CDX87681	Canola	nucleus	24.09	28.25
PGSC0003DMT400089939	Potato	cytosol	14.07	27.81
KRH74417	Soybean	nucleus	27.06	27.66
KRH39541	Soybean	nucleus	27.2	27.2
PGSC0003DMT400093591	Potato	cytosol	9.2	27.09
Solyc02g005600.1.1	Tomato	vacuole	17.86	27.05
Bra022060.1-P	Field mustard	nucleus	23.95	26.62
CDY37145	Canola	cytosol	23.82	26.43
Solyc09g015610.1.1	Tomato	cytosol	4.47	26.19
AT5G46740.1	Thale cress	nucleus, plastid	25.85	26.09
Solyc08g021790.1.1	Tomato	extracellular, vacuole	8.12	25.64
HORVU4Hr1G078590.1	Barley	cytosol	12.58	25.41
AT4G17895.1	Thale cress	nucleus	23.68	25.18
Bra021031.1-P	Field mustard	nucleus	21.38	24.61
CDX76553	Canola	cytosol	21.38	24.61
Solyc08g023360.1.1	Tomato	extracellular	8.39	24.41
CDY58499	Canola	endoplasmic reticulum	23.27	23.86
Bra025000.1-P	Field mustard	endoplasmic reticulum	23.41	23.73
HORVU6Hr1G050090.1	Barley	nucleus, plastid	12.72	23.04
CDX77686	Canola	endoplasmic reticulum	23.41	22.91
HORVU2Hr1G079230.7	Barley	mitochondrion	12.18	21.74
PGSC0003DMT400088084	Potato	cytosol	9.61	21.13
HORVU1Hr1G077630.2	Barley	plastid	16.51	18.8
HORVU7Hr1G030300.1	Barley	nucleus	22.73	18.06
HORVU2Hr1G114330.1	Barley	cytosol	13.13	17.32
HORVU5Hr1G069620.20	Barley	cytosol, nucleus	16.1	16.15
HORVU7Hr1G064340.3	Barley	endoplasmic reticulum	17.05	12.69
HORVU2Hr1G022340.2	Barley	cytosol	12.18	11.86
HORVU7Hr1G111430.5	Barley	cytosol, nucleus	16.24	11.42

Protein Annotations

Gene3D:3.90.70.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0006464	GO:GO:0006511
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016579	GO:GO:0016787
GO:GO:0019538	GO:GO:0036459	EnsemblPlantsGene:HORVU6Hr1G067180	EnsemblPlants:HORVU6Hr1G067180.4	InterPro:IPR028889	UniProt:M0WVD2
PFAM:PF00443	ScanProsite:PS00972	ScanProsite:PS00973	PFscan:PS50235	PANTHER:PTHR44033	InterPro:Papain_like_cys_pep_sf
InterPro:Peptidase_C19_UCH	SUPFAM:SSF54001	UniParc:UPI000295A322	InterPro:USP_CS	InterPro:USP_dom	SEG:seg

Description

No Description!

Coordinates

chrchr6H:+:465685001..465692246

Molecular Weight (calculated)

82098.0 Da

IEP (calculated)

5.089

GRAVY (calculated)

-0.670

Length

739 amino acids

Sequence
(BLAST)

001: MADDGAAASL SQPSPAQCDI SQENGDEKSK QCQPFFSMCE PLQAVSYPNS WDSVCAPAAT EPCQTSGLDS VDDEYMPSAP SFPDSQQLNS ESISAIVDES
101: KKLCSPPSPT GNECDVEQLQ LESEELLDDS GLLDGETKQQ SEPLTTDEPS SVDEIKKWGV ETKQHSPPVH NTKHWSSNRA LEPSDNENKP LSLFYSRFRQ
201: PQTVGAGLRN MGNTCFLNAT LQCITHTVPL FKKIRCTDHS TPCSYDKDGF CSFCALKEHI EESIRRSGSV LVPARFKDNL RKLSSDFIPG QQEDAHEFLR
301: CLLDNLHKCT LDPKSKGKPS SFDEESIVKQ VFGGRLKSQL SCRDCGHCSE TFEPFLDLSL EIDQVDDLVA ALESFTKVEQ VGDDENKLTC ESCKVQACKD
401: KRLVLDKAPD VIAFQLKRFT TLDNSIEKID KHVAYPSELD LTPFHNNPDK EELKYDLYGV VEHSGLPNYG HYVCTIRSSP NTWHLMNDSN VDSITETCAL
501: NQEAYILFYV RQGMFPWFSS LLEEARSGAS PVSVLDNIDA DCLTSSNRSR DDKFDIGETS ESKTSLLAKE PTKRSSVDAS NSTSKKEETT PLRISPLRAS
601: LQDDVGMRRA PSATEITNLE RPSTPPPLPK RPLSIDTYDV FKFEEFEDKD TPLMPKSEHQ PKVKKPKAAS ASKSVKGPCV DKNATRLMRG MPSARRKGLL
701: DCLNSQHNVA QGPRRGSRSD PLGKKKRKLD TTSVAVLQY

Best Arabidopsis Sequence Match ( AT3G14400.1 )
(BLAST)

001: MGFKLQMSWM PSLLSQKRRN GPPLGLRNLG NTCYLNSVLQ CLTFTPPLAN FCLTHKHSSH CDTYVDGERK RDCPFCIVEK RIARSLSVDL TTDAPNKISS
101: CLKIFAEHFK LGRQEDAHEF LRYVIDACHN TSLRLKKLRY NGNEPFNGNS VVKEIFGGAL QSQVKCLSCG AESNKADEIM DISLEILQSS SVKESLQKFF
201: QSEILDGNNK YRCESCEKLV TARKQMSILQ APNILVIQLK RFGGIFGGKI DKAISFGEIL VLSNFMSKAS KDPQPEYKLF GIIVHSGFSP ESGHYYAYVK
301: DSLGRWYCCN DSFVSLSTLQ EVLSEKAYIL FFSRSNQRPA SAKTLVTSNG TTSHEVNGCE TSNPQKFIGP LNGFNMKPQA EQSFQKGNLA SSKPHKFIRP
401: KPRAEQAPLE DNLLSSKVEK APLRPHAKVS ISVNLGAKRV SPVNGRLSFH QDENIAPKAN KENSVSVLPT KVNSGTERKF GTENGGNGVK ENGSAPGSSN
501: HKVALHPHER SNGSSNGGDH HKDNLHPCGS NGSQNGTAHP ETERNGVSTT QSKGLCSSTK EDPCILLRKD ESSRNELEAI KESLKKDALS HLRSCGWYDK
601: VLISMHAKKR LRTEQSGGED GSDLKRRLIE DVKSSLKSQI PEELKADLVN RIWEISKKKY S

Arabidopsis Description

UBP25Ubiquitin carboxyl-terminal hydrolase 25 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPS2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.