Factsheet for HORVU7Hr1G111430.5

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, cytosol

Predictor Summary:

cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus
Any Predictor:	cytosol
MultiLoc:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G485600.1	Wheat	golgi, plasma membrane	88.01	86.85
TraesCS7A01G498400.1	Wheat	extracellular, golgi, plasma membrane	87.25	86.51
TraesCS7B01G405400.1	Wheat	golgi, plasma membrane	87.92	85.95
KXG20513	Sorghum	golgi, plasma membrane	57.94	62.4
Os06t0654000-01	Rice	cytosol, nucleus	55.85	62.18
GSMUA_Achr7P05090_001	Banana	vacuole	26.74	60.17
Zm00001d036707_P006	Maize	plasma membrane	54.23	59.5
PGSC0003DMT400076065	Potato	endoplasmic reticulum	18.08	54.6
Bra007837.1-P	Field mustard	nucleus	22.26	45.88
Bra032080.1-P	Field mustard	endoplasmic reticulum, vacuole	26.74	44.53
CDY45587	Canola	endoplasmic reticulum, vacuole	26.55	44.08
KRH15706	Soybean	golgi, plasma membrane, vacuole	30.45	43.9
KRH52289	Soybean	golgi	30.54	43.73
CDY20330	Canola	vacuole	26.74	43.7
CDY34761	Canola	endoplasmic reticulum, vacuole	26.64	43.48
Bra011290.1-P	Field mustard	vacuole	25.31	43.46
AT4G31670.1	Thale cress	endoplasmic reticulum, golgi	26.07	43.42
KRH61621	Soybean	golgi	30.64	43.4
CDX76801	Canola	endoplasmic reticulum, golgi, vacuole	26.83	43.32
AT2G24640.1	Thale cress	endoplasmic reticulum, vacuole	27.69	43.3
CDX75188	Canola	vacuole	25.12	43.21
KRH05330	Soybean	golgi, plasma membrane	30.26	43.15
CDX68773	Canola	nucleus, plasma membrane	25.02	42.83
Solyc12g096430.1.1	Tomato	nucleus, plastid	25.21	42.6
Solyc08g069050.2.1	Tomato	extracellular	29.97	40.54
VIT_04s0069g00760.t01	Wine grape	nucleus	30.45	37.04
GSMUA_Achr1P10260_001	Banana	endoplasmic reticulum, plasma membrane	31.59	29.35
HORVU4Hr1G078590.1	Barley	cytosol	9.51	27.32
HORVU5Hr1G069620.20	Barley	cytosol, nucleus	18.17	25.92
HORVU6Hr1G050090.1	Barley	nucleus, plastid	9.32	24.02
HORVU2Hr1G079230.7	Barley	mitochondrion	9.13	23.19
HORVU7Hr1G064340.3	Barley	endoplasmic reticulum	19.31	20.44
HORVU2Hr1G114330.1	Barley	cytosol	9.51	17.86
HORVU1Hr1G077630.2	Barley	plastid	10.94	17.72
HORVU7Hr1G030300.1	Barley	nucleus	15.22	17.2
HORVU6Hr1G067180.4	Barley	nucleus	11.42	16.24
HORVU2Hr1G022340.2	Barley	cytosol	9.32	12.91

Protein Annotations

MapMan:19.2.3.1.1.7	Gene3D:3.30.60.180	Gene3D:3.90.70.10	UniProt:A0A287XTV8	ncoils:Coil	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0006464	GO:GO:0006511	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0016579	GO:GO:0016787	GO:GO:0019538	GO:GO:0036459
GO:GO:0046872	EnsemblPlantsGene:HORVU7Hr1G111430	EnsemblPlants:HORVU7Hr1G111430.5	InterPro:IPR002893	InterPro:IPR028889	PFAM:PF00443
PFAM:PF01753	ScanProsite:PS00972	ScanProsite:PS01360	PFscan:PS50235	PFscan:PS50865	PANTHER:PTHR45499
InterPro:Papain_like_cys_pep_sf	InterPro:Peptidase_C19_UCH	SUPFAM:SSF144232	SUPFAM:SSF54001	UniParc:UPI000B4656B3	InterPro:USP_CS
InterPro:USP_dom	InterPro:Znf_MYND	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr7H:+:633737195..633745323

Molecular Weight (calculated)

115414.0 Da

IEP (calculated)

6.429

GRAVY (calculated)

-0.631

Length

1051 amino acids

Sequence
(BLAST)

0001: YFVVDAAGFA AAYEDHHHHH PADYAMPPQG DQQPPPSSPR PEGQLQAAPP ELGPCAQCGA AGTKKCSGCK RMRYCSGECQ SKHWQSDHKF KCKQMKLLDS
0101: VDKLPCGVEA NSKKSSVYGR ISLVPGHRKL NKVIYPYDDF LKLYNWKYND WKYGEFLPCG LVNCGNSCFA NVVLQCLSYT RPLVAYLLEK DHTRQCTIRH
0201: EDWCFLCELQ SHIQKAIDSV HAFAPMNILS RLRNIGGNLG FGRQEDAHEF MRFAIDKMQS ACLDEYGGEK VVDHSTQETT VIQHIFGGRL QSQVQCTACG
0301: MVSNRYENMM DLTVEIHGDA ESLEKCLDQF TAVEWLDGDN KYKCDGCNDY VKARKHLTVH QAPNILTITL KRFQSGRFGK LNKKVTFPTT LDLTPYMSTT
0401: DGTDQYDLYA VVVHLDMLNA SFFGHYICYI KHHRGCWLKI DDCKVMAVDE EEVHAQGAYM LLYSRRTPRP VPLLAVKEPI KHEKQCKVPP LNGQNHLIPE
0501: DVPLKCESFS KPSEDLREGS ESSNDSVHRM DTVEQVSDLD LHMNIERDKL ITNGNMHQPI SSALHVLEED TRDPGSLLEG NNTMRADQYG NSACESSLVN
0601: SSEEECKEPA PGIDSVDYMD IDMEAGTEVE RRNVQQQPVL SDSVGVIGNK SSVPTFENCM SGKPKPLFSL GFLDKPSRKK SDSSEECQNG GSMAVSSQKI
0701: NGHRNEHLSR PEQGLIANSH GGRPSSANGS VHCNGGMFVT PSNGVLVNGD TQSGNYSLDA AKRDVPSVQG FSPRPYRSPS SSNLNQNNTS KGDMSFFPRG
0801: FLARPRSGEK AVKGDDGLPF SNGNGKPSSS SVNGNSISNT NSSPRSSPGG MGMSPGFLAK RSRESAAASF VGDPQTSNTS KEQEHVGAAA PLPYKIQERR
0901: SSYCTTNGIV AQQEAASNVS GHSDENGHAF VGTKNGIHGE ENGSNGTLDM HGSSCQMDDD TVIGRHVENG HGVLDIKDVI FREQNGSNGT LGTHSSSCQM
1001: DGMAVTLVSE NGMGSEDADH VVKSPAAPAH DGLRRRLTTS KYFDESSMEE H

Best Arabidopsis Sequence Match ( AT2G24640.1 )
(BLAST)

001: MHEVGLFVDL NSFTQLILTL FFVSIGLLYF VKRTAAKYFE VGGGSGGFDR DHRRDFMVSD TAECSVCGKA TTKKCSRCKS VRYCSAACQT SDWKSGHKLK
101: CKGFRSTDSS PVRRDDIDFE ASLFGNRSAS KKTRIALVPQ QSQSKATLKP TDVLFPYESF VRYYNWDRPI MAPCGLTNCG NSCFANVVLQ CLSWTRPLVA
201: YLLERGHKRE CRRNDWCFLC EFENHLDRAN YSRFPFSPMN IISRLPNIGG NLGYGRQEDA HELMRFAIDM MQSVCLDEFG GEKVVPPRAQ ETTLIQYIFG
301: GLLQSQVQCT ACSNVSDQYE NMMDLTVEIH GDAVSLEECL DQFTAKEWLQ GDNLYKCDRC DDYVKACKRL SIRCAPNILT IALKRFQGGR FGKLNKRISF
401: PETFDLGPYM SGGGEGSDVY KLYAVIVHLD MLNASFFGHY ICYVKDFRGN WYRIDDSEVE KVELEDVLSQ RAYMLLYSRV QPRPSNLRSE ESQDEKKTDT
501: LNTESNQDGS VESSGVGTND TSVSSLCNGI ISHSEDPEYE KESSLSASVP VSEEGKEVDV KVDTVDSESN RSIDMEHDSG TDHQEEEANG KEDPTVENLA
601: VDSSCLDITT PSPSAATEFI PQENERSDTE SKPLEKEHSD TESNKPLEKE HLDSESKPLE KEHSDTEMID AQ

Arabidopsis Description

UBP19Ubiquitin carboxyl-terminal hydrolase 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJA1]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.