CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 7
golgi 6
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
EpiLoc:	plasma membrane
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH15706	Soybean	golgi, plasma membrane, vacuole	92.54	93.55
PGSC0003DMT400076065	Potato	endoplasmic reticulum	30.8	65.23
KRH61621	Soybean	golgi	65.13	64.69
KRH52289	Soybean	golgi	63.91	64.17
GSMUA_Achr7P05090_001	Banana	vacuole	40.16	63.38
Bra032080.1-P	Field mustard	endoplasmic reticulum, vacuole	45.73	53.41
CDY45587	Canola	endoplasmic reticulum, vacuole	45.73	53.24
AT4G31670.1	Thale cress	endoplasmic reticulum, golgi	45.32	52.93
CDY20330	Canola	vacuole	46.13	52.88
CDY34761	Canola	endoplasmic reticulum, vacuole	46.13	52.8
Bra007837.1-P	Field mustard	nucleus	36.36	52.55
CDX76801	Canola	endoplasmic reticulum, golgi, vacuole	46.0	52.07
AT2G24640.1	Thale cress	endoplasmic reticulum, vacuole	46.81	51.34
CDX75188	Canola	vacuole	42.33	51.06
Bra011290.1-P	Field mustard	vacuole	42.2	50.82
CDX68773	Canola	nucleus, plasma membrane	42.33	50.81
Solyc08g069050.2.1	Tomato	extracellular	48.3	45.82
Solyc12g096430.1.1	Tomato	nucleus, plastid	37.18	44.05
VIT_04s0069g00760.t01	Wine grape	nucleus	50.07	42.71
Zm00001d036707_P006	Maize	plasma membrane	44.23	34.03
KXG20513	Sorghum	golgi, plasma membrane	44.78	33.81
Os06t0654000-01	Rice	cytosol, nucleus	42.06	32.84
GSMUA_Achr1P10260_001	Banana	endoplasmic reticulum, plasma membrane	46.81	30.5
HORVU7Hr1G111430.5	Barley	cytosol, nucleus	43.15	30.26
TraesCS7A01G498400.1	Wheat	extracellular, golgi, plasma membrane	43.28	30.09
TraesCS7B01G405400.1	Wheat	golgi, plasma membrane	43.69	29.95
TraesCS7D01G485600.1	Wheat	golgi, plasma membrane	43.28	29.95
KRH72298	Soybean	cytosol, plastid	19.27	27.95
KRH43175	Soybean	nucleus	13.16	26.29
KRH59329	Soybean	nucleus	13.16	26.29
KRH74502	Soybean	golgi, plasma membrane, vacuole	32.84	26.11
KRG97572	Soybean	nucleus	13.03	26.02
KRH31299	Soybean	nucleus	13.03	26.02
KRH69660	Soybean	golgi	32.7	25.69
KRH21804	Soybean	endoplasmic reticulum, plasma membrane	33.51	24.95
KRH13569	Soybean	endoplasmic reticulum, plasma membrane	33.24	24.77
KRH72452	Soybean	golgi, plasma membrane	33.79	24.03
KRH16837	Soybean	golgi	33.79	23.83
KRH52893	Soybean	extracellular, golgi, vacuole	28.36	23.54
KRH43852	Soybean	nucleus	18.59	21.37
KRH62182	Soybean	golgi, vacuole	32.7	21.18
KRH13611	Soybean	nucleus	18.59	21.01
KRH05289	Soybean	nucleus	13.7	18.2
KRH20191	Soybean	plastid	14.65	18.18
KRH03615	Soybean	cytosol	14.52	18.07
KRH39864	Soybean	cytosol	13.03	18.05
KRH74417	Soybean	nucleus	17.37	17.7
KRH23933	Soybean	cytosol	12.89	17.56
KRH15753	Soybean	nucleus	13.16	17.51
KRH03060	Soybean	nucleus	20.62	16.83
KRH39541	Soybean	nucleus	16.55	16.51

Protein Annotations

EntrezGene:100799652	MapMan:19.2.3.1.1.7	Gene3D:3.30.60.180	Gene3D:3.90.70.10	EMBL:ACUP02010726	MEROPS:C19.A09
EnsemblPlantsGene:GLYMA_17G220700	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0006464
GO:GO:0006511	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016579	GO:GO:0016787	GO:GO:0019538	GO:GO:0036459	GO:GO:0046872
InterPro:IPR002893	InterPro:IPR028889	UniProt:K7MNB1	EnsemblPlants:KRH05330	ProteinID:KRH05330	ProteinID:KRH05330.1
PFAM:PF00443	PFAM:PF01753	ScanProsite:PS00972	ScanProsite:PS01360	PFscan:PS50235	PFscan:PS50865
PANTHER:PTHR45499	InterPro:Papain_like_cys_pep_sf	InterPro:Peptidase_C19_UCH	SUPFAM:SSF144232	SUPFAM:SSF54001	TMHMM:TMhelix
UniParc:UPI00029545F9	InterPro:USP_CS	InterPro:USP_dom	InterPro:Znf_MYND	SEG:seg	:

Description

hypothetical protein

Coordinates

chr17:-:37265773..37272596

Molecular Weight (calculated)

80997.5 Da

IEP (calculated)

4.775

GRAVY (calculated)

-0.270

Length

737 amino acids

Sequence
(BLAST)

001: MLVAVGASWD LNWFLQLLLS VIVVAVGVHY FVKATASKYF LVDANFEGDH HALAAADPMP GALAAAADPL CAVCATPAPK KCSRCKAVRY CSQACQQSHW
101: MSGHKTVCKN FHGTNARSSA QNGVINRGFK TSAAGGKGSS SIALIPDCGD GAISRPIKQA KDVLFPYDEF VKFFNWDKPG FPPCGLLNCG NSCFANVVLQ
201: CLSFTKPLVA YLLEKGHRRE CSCNDWCFLC EFENHVERTR LSSQAFSPMN ILSRLPNIGG TLGYGKQEDA HEFMRFSIDT MQSVCLDEFG GEKAVPPNLQ
301: ETTLIQHIFG GRLQSEVICT KCDKISNQYE NMMDLTVEIH GDAASLEECL DQFTAKERLD GENMYKCEGC KDYVKAWKRL TVKCAPNILT IALKRFQVLS
401: GRFGKLNKRI AFPETLNLSP YMSEAGDGSD IYKLYGVVVH IDMLNASFFG HYICYIKDFQ GNWYRIDDWK VMTVEVEEVL SQGAYMLLYS RCSARTSSFQ
501: IQTSESSGIA EVQTEVEVEM EVEPGQTEQD ECLSNMKALT CSRGSEVLPS DASPELKVSS SYDCESSAGL NSQAKREQFE DVNMMDVDST GIANELSCGA
601: VESSYVPISQ TDSDLGDVDM GRSLEETSGC KQEQDDTDMV RSGSCSGLPN GSSFFDKHPS VSRDHQNMEE HSEHIDVVNC KLITAKDNAY YGNGYVSAND
701: SSMPVEDAGT QFSGISSFPT ENDKGNGIKK VEISADI

Best Arabidopsis Sequence Match ( AT2G24640.1 )
(BLAST)

001: MHEVGLFVDL NSFTQLILTL FFVSIGLLYF VKRTAAKYFE VGGGSGGFDR DHRRDFMVSD TAECSVCGKA TTKKCSRCKS VRYCSAACQT SDWKSGHKLK
101: CKGFRSTDSS PVRRDDIDFE ASLFGNRSAS KKTRIALVPQ QSQSKATLKP TDVLFPYESF VRYYNWDRPI MAPCGLTNCG NSCFANVVLQ CLSWTRPLVA
201: YLLERGHKRE CRRNDWCFLC EFENHLDRAN YSRFPFSPMN IISRLPNIGG NLGYGRQEDA HELMRFAIDM MQSVCLDEFG GEKVVPPRAQ ETTLIQYIFG
301: GLLQSQVQCT ACSNVSDQYE NMMDLTVEIH GDAVSLEECL DQFTAKEWLQ GDNLYKCDRC DDYVKACKRL SIRCAPNILT IALKRFQGGR FGKLNKRISF
401: PETFDLGPYM SGGGEGSDVY KLYAVIVHLD MLNASFFGHY ICYVKDFRGN WYRIDDSEVE KVELEDVLSQ RAYMLLYSRV QPRPSNLRSE ESQDEKKTDT
501: LNTESNQDGS VESSGVGTND TSVSSLCNGI ISHSEDPEYE KESSLSASVP VSEEGKEVDV KVDTVDSESN RSIDMEHDSG TDHQEEEANG KEDPTVENLA
601: VDSSCLDITT PSPSAATEFI PQENERSDTE SKPLEKEHSD TESNKPLEKE HLDSESKPLE KEHSDTEMID AQ

Arabidopsis Description

UBP19Ubiquitin carboxyl-terminal hydrolase 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJA1]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.