Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 4
- golgi 4
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G498400.1 | Wheat | extracellular, golgi, plasma membrane | 95.21 | 95.66 |
| TraesCS7B01G405400.1 | Wheat | golgi, plasma membrane | 95.21 | 94.33 |
| HORVU7Hr1G111430.5 | Barley | cytosol, nucleus | 86.85 | 88.01 |
| KXG20513 | Sorghum | golgi, plasma membrane | 59.44 | 64.86 |
| Zm00001d036707_P006 | Maize | plasma membrane | 55.87 | 62.11 |
| GSMUA_Achr7P05090_001 | Banana | vacuole | 27.23 | 62.1 |
| Os06t0654000-01 | Rice | cytosol, nucleus | 54.74 | 61.76 |
| PGSC0003DMT400076065 | Potato | endoplasmic reticulum | 18.12 | 55.46 |
| Bra007837.1-P | Field mustard | nucleus | 21.97 | 45.88 |
| Bra032080.1-P | Field mustard | endoplasmic reticulum, vacuole | 27.04 | 45.64 |
| CDY45587 | Canola | endoplasmic reticulum, vacuole | 26.85 | 45.18 |
| CDY20330 | Canola | vacuole | 26.95 | 44.63 |
| Bra011290.1-P | Field mustard | vacuole | 25.63 | 44.61 |
| KRH15706 | Soybean | golgi, plasma membrane, vacuole | 30.42 | 44.44 |
| KRH52289 | Soybean | golgi | 30.52 | 44.28 |
| AT4G31670.1 | Thale cress | endoplasmic reticulum, golgi | 26.2 | 44.22 |
| CDX75188 | Canola | vacuole | 25.35 | 44.19 |
| CDX76801 | Canola | endoplasmic reticulum, golgi, vacuole | 26.95 | 44.09 |
| KRH61621 | Soybean | golgi | 30.7 | 44.07 |
| CDX68773 | Canola | nucleus, plasma membrane | 25.35 | 43.97 |
| CDY34761 | Canola | endoplasmic reticulum, vacuole | 26.57 | 43.94 |
| AT2G24640.1 | Thale cress | endoplasmic reticulum, vacuole | 27.51 | 43.6 |
| KRH05330 | Soybean | golgi, plasma membrane | 29.95 | 43.28 |
| Solyc12g096430.1.1 | Tomato | nucleus, plastid | 25.16 | 43.09 |
| Solyc08g069050.2.1 | Tomato | extracellular | 29.67 | 40.67 |
| VIT_04s0069g00760.t01 | Wine grape | nucleus | 29.48 | 36.34 |
| GSMUA_Achr1P10260_001 | Banana | endoplasmic reticulum, plasma membrane | 32.39 | 30.5 |
| TraesCS4D01G304300.1 | Wheat | cytosol | 9.2 | 26.78 |
| TraesCS7D01G125700.1 | Wheat | nucleus | 9.11 | 26.5 |
| TraesCS2D01G517600.1 | Wheat | mitochondrion | 8.92 | 25.68 |
| TraesCS5D01G252600.2 | Wheat | endoplasmic reticulum, vacuole | 20.66 | 24.31 |
| TraesCS6D01G179700.1 | Wheat | plasma membrane | 21.78 | 23.75 |
| TraesCS6D01G187000.1 | Wheat | nucleus, plastid | 8.73 | 22.79 |
| TraesCS7D01G280800.4 | Wheat | plastid | 20.09 | 21.57 |
| TraesCS1D01G196500.1 | Wheat | cytosol | 10.8 | 20.39 |
| TraesCS1D01G331300.1 | Wheat | plastid | 11.17 | 18.42 |
| TraesCS7D01G149800.1 | Wheat | nucleus | 14.55 | 16.54 |
| TraesCS6D01G250100.1 | Wheat | nucleus | 11.46 | 16.51 |
| TraesCS6D01G339500.1 | Wheat | nucleus | 14.74 | 15.2 |
| TraesCS1D01G196600.1 | Wheat | nucleus | 11.36 | 13.89 |
| TraesCS2D01G129600.2 | Wheat | cytosol | 9.2 | 12.71 |
Protein Annotations
| MapMan:19.2.3.1.1.7 | Gene3D:3.30.60.180 | Gene3D:3.90.70.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006464 |
| GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016579 |
| GO:GO:0016787 | GO:GO:0019538 | GO:GO:0036459 | InterPro:IPR002893 | InterPro:IPR028889 | PFAM:PF00443 |
| PFAM:PF01753 | ScanProsite:PS00972 | ScanProsite:PS01360 | PFscan:PS50235 | PFscan:PS50865 | InterPro:Papain_like_cys_pep_sf |
| InterPro:Peptidase_C19_UCH | SUPFAM:SSF144232 | SUPFAM:SSF54001 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS7D01G485600 | EnsemblPlants:TraesCS7D01G485600.1 |
| InterPro:USP_CS | InterPro:USP_dom | InterPro:Znf_MYND | TIGR:cd02661 | SEG:seg | : |
Description
No Description!
Coordinates
chr7D:+:596003738..596011063
Molecular Weight (calculated)
116221.0 Da
IEP (calculated)
6.386
GRAVY (calculated)
-0.556
Length
1065 amino acids
Sequence
(BLAST)
(BLAST)
0001: MPGGGIGAGL DFDLPAVIQA ALVGFVLLAA AAAALRRAAS RYFLVDAAGF AAAYEDHHPA YAMPPQGDQQ PPPSSPQGQG QGQLQAAAPE LGPCAHCGAA
0101: GTKKCSGCKR MRYCSGECQS KHWQSDHKFK CKQMKLLDPI DKLPCGVEAS KKSPVSGHRG ISLVPGHRKL NKVIYPYDDF LKLYNWKCND SKYSDFLTCG
0201: LVNCGNSCFA NVVLQCLSYT RPLVAYLLGK DHYRQCAIRH EDWCFLCELQ SHIQRAFDSV HPFAPTNILS HLPNIGGNLG FGRQEDAHEF MRFAIDKMQS
0301: ACLDEFGGEK VVDHSTQETT VIQHIFGGRL QSQVQCTACG MVSNRYENMM DLTVEIHGDA ESLEKCLDQF TAIEWLDGDN KYKCDGCNDY VKARKHLTVH
0401: QAPNILTITL KRFQSGRFGK LNKKVTFPTK LDLTPYMSTT DGTDQYDLYA VVVHLDMLNA SFFGHYICYI KHYRGRWLKL DDCKGMAVDE EEVHAQGAYM
0501: LLYSRRTARP VPLLPVKEPI KHEKQCKVPP LNGQNHLIPE DMSLKCESFS KSSEDLREDS ESSNDSLHRM DTVNQVSDLD LHMNIERDKF VANGSIHQPI
0601: SSALHVLEED TRDSGSLLEG NNTMRADQFG NSACESSSVN SSEEECKEPA PGIDSVDYMD IDMEAGTEVE TQNVEQQPIL GDSVEVIGNK TSVPTFDNCM
0701: AGKPKPLFSV GFLDKPSRKK SDSREECQNG GSMAVSSQKI DGHCNEHLSR PEQGLIAYSR GVSPSSANGS VHCNGDVFVT PSNGVLVNGD TQSDNYSLNA
0801: AKRDVPSVQG FNPRPYRSPS SSNPNRNNTS KGLFPRGFLA KPRSGEKAVK VDDGLPFSNG NGKASSSSSV NGNGISNTNS SPRSSTGGMG MSPGFLAKRS
0901: RESAAASFMG DPQSSNTSKE QEHVGAAALL PDKIQERRSS YCTTNGIKAQ HGAASVHDVS GHSDENGHAF VGTKNGIHGE ENGSNGTLDM HDSSCQMDEN
1001: GHGVLDIKDV IFREQNVSNG TLDMHGMGSE DADHVVKSPA APAHDGLRRR LTTSKYFDES SMDEQ
0101: GTKKCSGCKR MRYCSGECQS KHWQSDHKFK CKQMKLLDPI DKLPCGVEAS KKSPVSGHRG ISLVPGHRKL NKVIYPYDDF LKLYNWKCND SKYSDFLTCG
0201: LVNCGNSCFA NVVLQCLSYT RPLVAYLLGK DHYRQCAIRH EDWCFLCELQ SHIQRAFDSV HPFAPTNILS HLPNIGGNLG FGRQEDAHEF MRFAIDKMQS
0301: ACLDEFGGEK VVDHSTQETT VIQHIFGGRL QSQVQCTACG MVSNRYENMM DLTVEIHGDA ESLEKCLDQF TAIEWLDGDN KYKCDGCNDY VKARKHLTVH
0401: QAPNILTITL KRFQSGRFGK LNKKVTFPTK LDLTPYMSTT DGTDQYDLYA VVVHLDMLNA SFFGHYICYI KHYRGRWLKL DDCKGMAVDE EEVHAQGAYM
0501: LLYSRRTARP VPLLPVKEPI KHEKQCKVPP LNGQNHLIPE DMSLKCESFS KSSEDLREDS ESSNDSLHRM DTVNQVSDLD LHMNIERDKF VANGSIHQPI
0601: SSALHVLEED TRDSGSLLEG NNTMRADQFG NSACESSSVN SSEEECKEPA PGIDSVDYMD IDMEAGTEVE TQNVEQQPIL GDSVEVIGNK TSVPTFDNCM
0701: AGKPKPLFSV GFLDKPSRKK SDSREECQNG GSMAVSSQKI DGHCNEHLSR PEQGLIAYSR GVSPSSANGS VHCNGDVFVT PSNGVLVNGD TQSDNYSLNA
0801: AKRDVPSVQG FNPRPYRSPS SSNPNRNNTS KGLFPRGFLA KPRSGEKAVK VDDGLPFSNG NGKASSSSSV NGNGISNTNS SPRSSTGGMG MSPGFLAKRS
0901: RESAAASFMG DPQSSNTSKE QEHVGAAALL PDKIQERRSS YCTTNGIKAQ HGAASVHDVS GHSDENGHAF VGTKNGIHGE ENGSNGTLDM HDSSCQMDEN
1001: GHGVLDIKDV IFREQNVSNG TLDMHGMGSE DADHVVKSPA APAHDGLRRR LTTSKYFDES SMDEQ
001: MHEVGLFVDL NSFTQLILTL FFVSIGLLYF VKRTAAKYFE VGGGSGGFDR DHRRDFMVSD TAECSVCGKA TTKKCSRCKS VRYCSAACQT SDWKSGHKLK
101: CKGFRSTDSS PVRRDDIDFE ASLFGNRSAS KKTRIALVPQ QSQSKATLKP TDVLFPYESF VRYYNWDRPI MAPCGLTNCG NSCFANVVLQ CLSWTRPLVA
201: YLLERGHKRE CRRNDWCFLC EFENHLDRAN YSRFPFSPMN IISRLPNIGG NLGYGRQEDA HELMRFAIDM MQSVCLDEFG GEKVVPPRAQ ETTLIQYIFG
301: GLLQSQVQCT ACSNVSDQYE NMMDLTVEIH GDAVSLEECL DQFTAKEWLQ GDNLYKCDRC DDYVKACKRL SIRCAPNILT IALKRFQGGR FGKLNKRISF
401: PETFDLGPYM SGGGEGSDVY KLYAVIVHLD MLNASFFGHY ICYVKDFRGN WYRIDDSEVE KVELEDVLSQ RAYMLLYSRV QPRPSNLRSE ESQDEKKTDT
501: LNTESNQDGS VESSGVGTND TSVSSLCNGI ISHSEDPEYE KESSLSASVP VSEEGKEVDV KVDTVDSESN RSIDMEHDSG TDHQEEEANG KEDPTVENLA
601: VDSSCLDITT PSPSAATEFI PQENERSDTE SKPLEKEHSD TESNKPLEKE HLDSESKPLE KEHSDTEMID AQ
101: CKGFRSTDSS PVRRDDIDFE ASLFGNRSAS KKTRIALVPQ QSQSKATLKP TDVLFPYESF VRYYNWDRPI MAPCGLTNCG NSCFANVVLQ CLSWTRPLVA
201: YLLERGHKRE CRRNDWCFLC EFENHLDRAN YSRFPFSPMN IISRLPNIGG NLGYGRQEDA HELMRFAIDM MQSVCLDEFG GEKVVPPRAQ ETTLIQYIFG
301: GLLQSQVQCT ACSNVSDQYE NMMDLTVEIH GDAVSLEECL DQFTAKEWLQ GDNLYKCDRC DDYVKACKRL SIRCAPNILT IALKRFQGGR FGKLNKRISF
401: PETFDLGPYM SGGGEGSDVY KLYAVIVHLD MLNASFFGHY ICYVKDFRGN WYRIDDSEVE KVELEDVLSQ RAYMLLYSRV QPRPSNLRSE ESQDEKKTDT
501: LNTESNQDGS VESSGVGTND TSVSSLCNGI ISHSEDPEYE KESSLSASVP VSEEGKEVDV KVDTVDSESN RSIDMEHDSG TDHQEEEANG KEDPTVENLA
601: VDSSCLDITT PSPSAATEFI PQENERSDTE SKPLEKEHSD TESNKPLEKE HLDSESKPLE KEHSDTEMID AQ
Arabidopsis Description
UBP19Ubiquitin carboxyl-terminal hydrolase 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJA1]
SUBAcon: [endoplasmic reticulum,vacuole]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.