Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G389500.1 | Wheat | nucleus | 94.77 | 91.58 |
| TraesCS6A01G357500.1 | Wheat | mitochondrion, nucleus | 90.42 | 87.21 |
| Os02t0795000-01 | Rice | nucleus | 56.15 | 48.95 |
| KRH72298 | Soybean | cytosol, plastid | 24.01 | 48.82 |
| TraesCS7D01G149800.1 | Wheat | nucleus | 42.88 | 47.28 |
| GSMUA_Achr3P04660_001 | Banana | nucleus | 26.33 | 45.33 |
| CDY11838 | Canola | nucleus, plastid | 29.14 | 36.75 |
| GSMUA_Achr4P01920_001 | Banana | nucleus | 33.98 | 36.34 |
| KRH03060 | Soybean | nucleus | 31.75 | 36.32 |
| CDY57464 | Canola | nucleus | 29.82 | 36.32 |
| CDX88651 | Canola | nucleus, plastid | 28.94 | 36.29 |
| VIT_19s0014g00210.t01 | Wine grape | nucleus | 31.17 | 36.02 |
| Bra006790.1-P | Field mustard | nucleus, plastid | 28.94 | 35.98 |
| CDY32735 | Canola | nucleus | 27.59 | 35.58 |
| CDY02782 | Canola | nucleus | 27.59 | 35.58 |
| PGSC0003DMT400028924 | Potato | nucleus | 31.85 | 35.53 |
| Solyc07g005530.2.1 | Tomato | nucleus | 31.66 | 35.43 |
| VIT_00s0174g00260.t01 | Wine grape | nucleus | 34.17 | 35.41 |
| CDY55010 | Canola | nucleus | 28.94 | 35.18 |
| Bra020400.1-P | Field mustard | nucleus | 28.07 | 34.81 |
| GSMUA_Achr6P01970_001 | Banana | nucleus, plastid | 27.59 | 33.57 |
| AT5G57990.1 | Thale cress | nucleus | 27.78 | 33.41 |
| Bra002683.1-P | Field mustard | nucleus | 30.2 | 31.77 |
| TraesCS4D01G304300.1 | Wheat | cytosol | 9.87 | 27.87 |
| TraesCS7D01G125700.1 | Wheat | nucleus | 9.78 | 27.6 |
| TraesCS6D01G250100.1 | Wheat | nucleus | 17.43 | 24.36 |
| TraesCS2D01G517600.1 | Wheat | mitochondrion | 8.71 | 24.32 |
| TraesCS1D01G196500.1 | Wheat | cytosol | 12.49 | 22.87 |
| TraesCS6D01G187000.1 | Wheat | nucleus, plastid | 8.91 | 22.55 |
| TraesCS1D01G331300.1 | Wheat | plastid | 13.65 | 21.83 |
| TraesCS1D01G196600.1 | Wheat | nucleus | 13.36 | 15.84 |
| TraesCS5D01G252600.2 | Wheat | endoplasmic reticulum, vacuole | 13.07 | 14.92 |
| TraesCS7D01G485600.1 | Wheat | golgi, plasma membrane | 15.2 | 14.74 |
| TraesCS7D01G280800.4 | Wheat | plastid | 14.04 | 14.62 |
| TraesCS6D01G179700.1 | Wheat | plasma membrane | 12.68 | 13.41 |
| TraesCS2D01G129600.2 | Wheat | cytosol | 9.2 | 12.32 |
Protein Annotations
| MapMan:19.2.3.1.1.9 | Gene3D:3.90.70.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006464 | GO:GO:0006511 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016579 | GO:GO:0016787 |
| GO:GO:0019538 | GO:GO:0036459 | InterPro:IPR028889 | PFAM:PF00443 | ScanProsite:PS00972 | ScanProsite:PS00973 |
| PFscan:PS50235 | PANTHER:PTHR44033 | PANTHER:PTHR44033:SF1 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C19_UCH | SUPFAM:SSF54001 |
| EnsemblPlantsGene:TraesCS6D01G339500 | EnsemblPlants:TraesCS6D01G339500.1 | InterPro:USP_CS | InterPro:USP_dom | TIGR:cd02661 | SEG:seg |
Description
No Description!
Coordinates
chr6D:+:438929255..438935176
Molecular Weight (calculated)
112786.0 Da
IEP (calculated)
8.024
GRAVY (calculated)
-0.562
Length
1033 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGEAAAAAAA HRRIQFHASA GPGAAGGAPM QRPYPNPDRR LAVAAAAREK KGEAGAGAGG LDRELAAARV YLRRIGAGLR NLGNTCYLNS VLQCLTYTEP
0101: FVAYLQSGKH TSSSCRAAGF CALCALQNHV RCALQSTGKI LTPVQFVKNL KCISRSFRYY RQEDAHELMV NLLESMHKCC LPSGIPSQSQ SAYENSLVHR
0201: IFGGRLRSQV RCASCSHCSS KFDPFLDLSL EIANAATLVK ALQNFTEEQA LDGGEKQYNC QSCKKKVVAK KRFTIDKAPD VLTIHLKRFS PFNPGQKINK
0301: KVDFQSTLNL KPFVSNSEGM DFRYSLYGVL VHAGWNTQSG HYYCFVRTSS GIWHNLDDNE VCQVREADVL RQKAYMLFYV RDRVRSSVML KNNGAAGSLV
0401: KNAISEKTAN MNGTIRNGLM EAKLNVPSFT NGDVKSQKQN PDDGRPSIFG SSSHGQCSKY SSSTGVIEAA AVQNNGVQNN GMVSVQTAAA TLSINTTKTT
0501: SDSEREIVSS AQPDVIVPHN SSCDPKAYEK PLQEQQPESD GAFTDSGKGS IAALPICNGG DGMLEENHQA SEPRTDPCGE QTLNTSKPAE SAEIKKTKHM
0601: MLSVSNGTMS SREDLTCCNE AKESAESGKQ PDEIAMEELS AESTGAITNA VEQQMQASMQ NNDLVAGQAH SETHVYSEVS AQAICPEVSA QAICPEVCAR
0701: SVCPEVCGQS VCPEVSAQAM CPEVSAQAIC PEDPAQAICP EVSAQAICPE VPAQVICPEA SAQAICPEDP AQVLDKDPCH GNFRTMKDLK SKKHTDYSTV
0801: HLLFVSKQPL LAALKLHKKR KHKRAKRQSI DNGITADDQQ TSTSETVFTK DISCKSHRRR KRSRASASSD NGIEISTKKP HLIERSSSAA DLPVDKKDDK
0901: DATLASAELP GACVSSVPDQ TDSRNSADAN ERVPSHFDLL TRGLSEITVP LWDDIDMSRR KSEFQYPRRT ESIGYVLDEW DEEYDRGKRK KVRKPREESN
1001: GPNPFQEAAD VRARPRKRLR SDQARWGNQP RRI
0101: FVAYLQSGKH TSSSCRAAGF CALCALQNHV RCALQSTGKI LTPVQFVKNL KCISRSFRYY RQEDAHELMV NLLESMHKCC LPSGIPSQSQ SAYENSLVHR
0201: IFGGRLRSQV RCASCSHCSS KFDPFLDLSL EIANAATLVK ALQNFTEEQA LDGGEKQYNC QSCKKKVVAK KRFTIDKAPD VLTIHLKRFS PFNPGQKINK
0301: KVDFQSTLNL KPFVSNSEGM DFRYSLYGVL VHAGWNTQSG HYYCFVRTSS GIWHNLDDNE VCQVREADVL RQKAYMLFYV RDRVRSSVML KNNGAAGSLV
0401: KNAISEKTAN MNGTIRNGLM EAKLNVPSFT NGDVKSQKQN PDDGRPSIFG SSSHGQCSKY SSSTGVIEAA AVQNNGVQNN GMVSVQTAAA TLSINTTKTT
0501: SDSEREIVSS AQPDVIVPHN SSCDPKAYEK PLQEQQPESD GAFTDSGKGS IAALPICNGG DGMLEENHQA SEPRTDPCGE QTLNTSKPAE SAEIKKTKHM
0601: MLSVSNGTMS SREDLTCCNE AKESAESGKQ PDEIAMEELS AESTGAITNA VEQQMQASMQ NNDLVAGQAH SETHVYSEVS AQAICPEVSA QAICPEVCAR
0701: SVCPEVCGQS VCPEVSAQAM CPEVSAQAIC PEDPAQAICP EVSAQAICPE VPAQVICPEA SAQAICPEDP AQVLDKDPCH GNFRTMKDLK SKKHTDYSTV
0801: HLLFVSKQPL LAALKLHKKR KHKRAKRQSI DNGITADDQQ TSTSETVFTK DISCKSHRRR KRSRASASSD NGIEISTKKP HLIERSSSAA DLPVDKKDDK
0901: DATLASAELP GACVSSVPDQ TDSRNSADAN ERVPSHFDLL TRGLSEITVP LWDDIDMSRR KSEFQYPRRT ESIGYVLDEW DEEYDRGKRK KVRKPREESN
1001: GPNPFQEAAD VRARPRKRLR SDQARWGNQP RRI
001: MHEVGLFVDL NSFTQLILTL FFVSIGLLYF VKRTAAKYFE VGGGSGGFDR DHRRDFMVSD TAECSVCGKA TTKKCSRCKS VRYCSAACQT SDWKSGHKLK
101: CKGFRSTDSS PVRRDDIDFE ASLFGNRSAS KKTRIALVPQ QSQSKATLKP TDVLFPYESF VRYYNWDRPI MAPCGLTNCG NSCFANVVLQ CLSWTRPLVA
201: YLLERGHKRE CRRNDWCFLC EFENHLDRAN YSRFPFSPMN IISRLPNIGG NLGYGRQEDA HELMRFAIDM MQSVCLDEFG GEKVVPPRAQ ETTLIQYIFG
301: GLLQSQVQCT ACSNVSDQYE NMMDLTVEIH GDAVSLEECL DQFTAKEWLQ GDNLYKCDRC DDYVKACKRL SIRCAPNILT IALKRFQGGR FGKLNKRISF
401: PETFDLGPYM SGGGEGSDVY KLYAVIVHLD MLNASFFGHY ICYVKDFRGN WYRIDDSEVE KVELEDVLSQ RAYMLLYSRV QPRPSNLRSE ESQDEKKTDT
501: LNTESNQDGS VESSGVGTND TSVSSLCNGI ISHSEDPEYE KESSLSASVP VSEEGKEVDV KVDTVDSESN RSIDMEHDSG TDHQEEEANG KEDPTVENLA
601: VDSSCLDITT PSPSAATEFI PQENERSDTE SKPLEKEHSD TESNKPLEKE HLDSESKPLE KEHSDTEMID AQ
101: CKGFRSTDSS PVRRDDIDFE ASLFGNRSAS KKTRIALVPQ QSQSKATLKP TDVLFPYESF VRYYNWDRPI MAPCGLTNCG NSCFANVVLQ CLSWTRPLVA
201: YLLERGHKRE CRRNDWCFLC EFENHLDRAN YSRFPFSPMN IISRLPNIGG NLGYGRQEDA HELMRFAIDM MQSVCLDEFG GEKVVPPRAQ ETTLIQYIFG
301: GLLQSQVQCT ACSNVSDQYE NMMDLTVEIH GDAVSLEECL DQFTAKEWLQ GDNLYKCDRC DDYVKACKRL SIRCAPNILT IALKRFQGGR FGKLNKRISF
401: PETFDLGPYM SGGGEGSDVY KLYAVIVHLD MLNASFFGHY ICYVKDFRGN WYRIDDSEVE KVELEDVLSQ RAYMLLYSRV QPRPSNLRSE ESQDEKKTDT
501: LNTESNQDGS VESSGVGTND TSVSSLCNGI ISHSEDPEYE KESSLSASVP VSEEGKEVDV KVDTVDSESN RSIDMEHDSG TDHQEEEANG KEDPTVENLA
601: VDSSCLDITT PSPSAATEFI PQENERSDTE SKPLEKEHSD TESNKPLEKE HLDSESKPLE KEHSDTEMID AQ
Arabidopsis Description
UBP19Ubiquitin carboxyl-terminal hydrolase 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJA1]
SUBAcon: [endoplasmic reticulum,vacuole]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.