Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 3
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY57464 | Canola | nucleus | 69.5 | 70.4 |
CDX88651 | Canola | nucleus, plastid | 67.4 | 70.27 |
CDY11838 | Canola | nucleus, plastid | 66.82 | 70.09 |
Bra006790.1-P | Field mustard | nucleus, plastid | 67.4 | 69.68 |
CDY55010 | Canola | nucleus | 67.87 | 68.59 |
CDY02782 | Canola | nucleus | 62.28 | 66.79 |
CDY32735 | Canola | nucleus | 61.47 | 65.92 |
Bra020400.1-P | Field mustard | nucleus | 62.75 | 64.71 |
Bra002683.1-P | Field mustard | nucleus | 69.62 | 60.9 |
KRH72298 | Soybean | cytosol, plastid | 32.71 | 55.31 |
GSMUA_Achr3P04660_001 | Banana | nucleus | 31.55 | 45.17 |
KRH03060 | Soybean | nucleus | 41.56 | 39.53 |
VIT_19s0014g00210.t01 | Wine grape | nucleus | 40.51 | 38.93 |
VIT_00s0174g00260.t01 | Wine grape | nucleus | 43.66 | 37.61 |
Solyc07g005530.2.1 | Tomato | nucleus | 40.16 | 37.38 |
PGSC0003DMT400028924 | Potato | nucleus | 40.05 | 37.15 |
Os06t0184300-01 | Rice | mitochondrion | 37.37 | 34.74 |
TraesCS7A01G147900.1 | Wheat | nucleus | 37.14 | 34.64 |
HORVU7Hr1G030300.1 | Barley | nucleus | 37.37 | 34.52 |
TraesCS7D01G149800.1 | Wheat | nucleus | 37.6 | 34.47 |
TraesCS7B01G051400.2 | Wheat | nucleus | 37.6 | 34.4 |
EER89337 | Sorghum | nucleus | 36.2 | 33.91 |
Zm00001d045104_P005 | Maize | nucleus | 35.04 | 33.33 |
GSMUA_Achr4P01920_001 | Banana | nucleus | 37.49 | 33.33 |
GSMUA_Achr6P01970_001 | Banana | nucleus, plastid | 30.85 | 31.21 |
TraesCS6D01G339500.1 | Wheat | nucleus | 33.41 | 27.78 |
TraesCS6B01G389500.1 | Wheat | nucleus | 33.64 | 27.03 |
TraesCS6A01G357500.1 | Wheat | mitochondrion, nucleus | 33.29 | 26.7 |
AT2G22310.1 | Thale cress | nucleus | 10.94 | 25.75 |
Os02t0795000-01 | Rice | nucleus | 35.39 | 25.65 |
AT4G39910.1 | Thale cress | nucleus | 10.83 | 25.07 |
AT3G14400.1 | Thale cress | mitochondrion | 16.76 | 21.79 |
AT4G31670.1 | Thale cress | endoplasmic reticulum, golgi | 14.9 | 20.29 |
AT5G46740.1 | Thale cress | nucleus, plastid | 17.23 | 20.22 |
AT2G24640.1 | Thale cress | endoplasmic reticulum, vacuole | 15.72 | 20.09 |
AT4G17895.1 | Thale cress | nucleus | 15.83 | 19.57 |
AT5G10790.1 | Thale cress | cytosol | 12.11 | 18.67 |
AT4G30890.2 | Thale cress | cytosol | 11.41 | 17.79 |
AT5G65450.2 | Thale cress | endoplasmic reticulum, golgi, mitochondrion, nucleus | 15.25 | 17.47 |
AT1G17110.2 | Thale cress | endoplasmic reticulum, plasma membrane | 16.3 | 15.09 |
AT4G24560.1 | Thale cress | extracellular, golgi | 16.18 | 13.79 |
Protein Annotations
MapMan:19.2.3.1.1.9 | Gene3D:3.90.70.10 | EntrezGene:835910 | ProteinID:AED96982.1 | EMBL:AF302671 | ArrayExpress:AT5G57990 |
EnsemblPlantsGene:AT5G57990 | RefSeq:AT5G57990 | TAIR:AT5G57990 | RefSeq:AT5G57990-TAIR-G | EnsemblPlants:AT5G57990.1 | TAIR:AT5G57990.1 |
Unigene:At.22531 | ProteinID:BAB08869.1 | MEROPS:C19.A12 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006464 |
GO:GO:0006508 | GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 | GO:GO:0008234 |
GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016579 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0036459 |
InterPro:IPR028889 | RefSeq:NP_568873.1 | PFAM:PF00443 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 |
PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | ScanProsite:PS00972 | ScanProsite:PS00973 |
PFscan:PS50235 | PANTHER:PTHR44033 | PANTHER:PTHR44033:SF1 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C19_UCH | UniProt:Q9FPS4 |
SUPFAM:SSF54001 | Symbol:UBP23 | UniParc:UPI00001628A1 | InterPro:USP_CS | InterPro:USP_dom | SEG:seg |
Description
UBP23Ubiquitin carboxyl-terminal hydrolase 23 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPS4]
Coordinates
chr5:-:23469924..23474172
Molecular Weight (calculated)
94908.2 Da
IEP (calculated)
9.704
GRAVY (calculated)
-0.500
Length
859 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVATSSTEI TIQTDRDPSS NNNGSCAVAS STASAVFRKI EFHPARKPFN GFSNGRSDFK IETLNPCSSN QRLLSAPSAK KPDSSDLLEH GFEPDLTFSI
101: TFRKIGAGLQ NLGNTCFLNS VLQCLTYTEP LAATLQTAAH QKYCHVAGFC ALCAIQKHVR TARQANGRIL APKDLVSNLR CISRNFRNCR QEDAHEYMIN
201: LLECMHKCSL PSGVPSESSD AYRRSLVHKI FGGSLRSQVK CEQCSHCSNK FDPFLDLSLD ISKADSLQRA LSRFTAVELL DNGAKVYQCE RCKQKVKAKK
301: QLTVSKAPYV LTVHLKRFEA HRSEKIDRKV DFTSAIDMKP FVSGPHEGNL KYTLYGVLVH YGRSSHSGHY ACFVRTSSGM WYSLDDNRVV QVSEKTVFNQ
401: KAYMLFYVRD RQNAVPKNSV PVVKKESFAT NRASLIVASN IKDQVNGSTV IKECGFGALV ANGLAPLKSC GPSTPAVLTQ KDLNAKETQN NAISNVEAKE
501: ILETENGSAP VKTCDLAAPT VLVQKDLNTK EIFQKEVPLP QANGEGSLVK EDSKAACLIL PEKVSPHLDG SANAQTLVKL PTLGPKAENS VEEKNSLNNL
601: NEPANSLKVI NVSVGNPPVE KAVLIDQTMG HHLEESATSI ESLKLTSERE TLTTPKKTRK PKTKTLKVEF KFFKLALGLR KKKVQRRERL STTVAGEIIS
701: EELLSKKRVK YQDTSLIAPS KMISSSDGAV TSDQQQPVGS SDLSEASQNA KRKRESVLLQ KEAVNILTRG VPETVVAKWD EEISASQKRG SKSEGASSIG
801: YVADEWDEEY DRGKKKKIRI KEESYRGPNP FQMLASKRQK ETKKKWTQSI TDAKTAYRI
101: TFRKIGAGLQ NLGNTCFLNS VLQCLTYTEP LAATLQTAAH QKYCHVAGFC ALCAIQKHVR TARQANGRIL APKDLVSNLR CISRNFRNCR QEDAHEYMIN
201: LLECMHKCSL PSGVPSESSD AYRRSLVHKI FGGSLRSQVK CEQCSHCSNK FDPFLDLSLD ISKADSLQRA LSRFTAVELL DNGAKVYQCE RCKQKVKAKK
301: QLTVSKAPYV LTVHLKRFEA HRSEKIDRKV DFTSAIDMKP FVSGPHEGNL KYTLYGVLVH YGRSSHSGHY ACFVRTSSGM WYSLDDNRVV QVSEKTVFNQ
401: KAYMLFYVRD RQNAVPKNSV PVVKKESFAT NRASLIVASN IKDQVNGSTV IKECGFGALV ANGLAPLKSC GPSTPAVLTQ KDLNAKETQN NAISNVEAKE
501: ILETENGSAP VKTCDLAAPT VLVQKDLNTK EIFQKEVPLP QANGEGSLVK EDSKAACLIL PEKVSPHLDG SANAQTLVKL PTLGPKAENS VEEKNSLNNL
601: NEPANSLKVI NVSVGNPPVE KAVLIDQTMG HHLEESATSI ESLKLTSERE TLTTPKKTRK PKTKTLKVEF KFFKLALGLR KKKVQRRERL STTVAGEIIS
701: EELLSKKRVK YQDTSLIAPS KMISSSDGAV TSDQQQPVGS SDLSEASQNA KRKRESVLLQ KEAVNILTRG VPETVVAKWD EEISASQKRG SKSEGASSIG
801: YVADEWDEEY DRGKKKKIRI KEESYRGPNP FQMLASKRQK ETKKKWTQSI TDAKTAYRI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.