Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 6
- golgi 5
- extracellular 5
- vacuole 4
- plasma membrane 5
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY65125 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 81.68 | 86.43 |
| Bra016618.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 82.54 | 85.87 |
| CDY48465 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 80.93 | 85.73 |
| CDX83925 | Canola | nucleus | 77.8 | 85.24 |
| Bra026003.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 80.17 | 84.83 |
| CDX96790 | Canola | nucleus | 76.08 | 84.55 |
| KRH13569 | Soybean | endoplasmic reticulum, plasma membrane | 51.4 | 48.23 |
| KRH21804 | Soybean | endoplasmic reticulum, plasma membrane | 51.4 | 48.18 |
| VIT_19s0140g00200.t01 | Wine grape | plasma membrane | 51.29 | 47.74 |
| Solyc07g061780.2.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 49.35 | 47.41 |
| GSMUA_Achr3P03560_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 41.59 | 46.06 |
| GSMUA_Achr3P17560_001 | Banana | endoplasmic reticulum, golgi | 41.49 | 41.58 |
| OQU84698 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 41.7 | 40.06 |
| Zm00001d053450_P066 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 41.59 | 39.79 |
| TraesCS6D01G179700.1 | Wheat | plasma membrane | 41.81 | 39.71 |
| GSMUA_Achr2P20080_001 | Banana | plasma membrane | 40.19 | 39.64 |
| Os02t0244300-01 | Rice | endoplasmic reticulum, plasma membrane | 41.59 | 39.59 |
| TraesCS6B01G231700.4 | Wheat | plasma membrane | 41.81 | 39.43 |
| TraesCS6A01G192600.1 | Wheat | plasma membrane | 41.59 | 39.39 |
| Zm00001d016165_P039 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 41.92 | 38.67 |
| AT4G31670.1 | Thale cress | endoplasmic reticulum, golgi | 24.03 | 35.34 |
| AT2G24640.1 | Thale cress | endoplasmic reticulum, vacuole | 24.57 | 33.93 |
| AT5G65450.2 | Thale cress | endoplasmic reticulum, golgi, mitochondrion, nucleus | 25.0 | 30.93 |
| AT4G39910.1 | Thale cress | nucleus | 10.67 | 26.68 |
| AT2G22310.1 | Thale cress | nucleus | 10.24 | 26.03 |
| AT4G24560.1 | Thale cress | extracellular, golgi | 26.94 | 24.8 |
| AT5G10790.1 | Thale cress | cytosol | 12.07 | 20.11 |
| AT3G14400.1 | Thale cress | mitochondrion | 13.9 | 19.52 |
| AT4G30890.2 | Thale cress | cytosol | 10.34 | 17.42 |
| AT5G57990.1 | Thale cress | nucleus | 15.09 | 16.3 |
| AT4G17895.1 | Thale cress | nucleus | 12.07 | 16.12 |
| AT5G46740.1 | Thale cress | nucleus, plastid | 11.96 | 15.16 |
Protein Annotations
| MapMan:19.2.3.1.1.7 | Gene3D:3.30.60.180 | Gene3D:3.90.70.10 | EntrezGene:838281 | ProteinID:AEE29543.1 | ArrayExpress:AT1G17110 |
| EnsemblPlantsGene:AT1G17110 | RefSeq:AT1G17110 | TAIR:AT1G17110 | RefSeq:AT1G17110-TAIR-G | EnsemblPlants:AT1G17110.2 | TAIR:AT1G17110.2 |
| Unigene:At.48199 | UniProt:F4I642 | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004843 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 |
| GO:GO:0006464 | GO:GO:0006508 | GO:GO:0006511 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008233 | GO:GO:0008283 | GO:GO:0009056 | GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009987 |
| GO:GO:0010154 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016579 | GO:GO:0016787 | GO:GO:0019538 |
| GO:GO:0036459 | GO:GO:0046872 | GO:GO:0048364 | GO:GO:0048366 | GO:GO:0048367 | InterPro:IPR002893 |
| InterPro:IPR028889 | RefSeq:NP_001185019.1 | PFAM:PF00443 | PFAM:PF01753 | PO:PO:0000013 | PO:PO:0000014 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009001 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009049 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | ScanProsite:PS00972 | PFscan:PS50235 | PFscan:PS50865 | PANTHER:PTHR45492 | InterPro:Papain_like_cys_pep_sf |
| InterPro:Peptidase_C19_UCH | SUPFAM:SSF144232 | SUPFAM:SSF54001 | TMHMM:TMhelix | Symbol:UBP15 | UniParc:UPI0001E92B68 |
| InterPro:USP_CS | InterPro:USP_dom | InterPro:Znf_MYND | SEG:seg | : | : |
Description
UBP15Ubiquitin-specific protease 15 [Source:UniProtKB/TrEMBL;Acc:F4I642]
Coordinates
chr1:-:5845675..5850934
Molecular Weight (calculated)
104069.0 Da
IEP (calculated)
7.834
GRAVY (calculated)
-0.562
Length
928 amino acids
Sequence
(BLAST)
(BLAST)
001: MLEPRGADIP ILFLVLVVLP VVAYILLGKW SNISEKRVRA NLLAQMAAEE ALRAETVVNA DRGVRFESVA TENRAQRTRT KTVSAGGGAV RAEFDAGARE
101: TVAEQRSDSV TATCGVTVVA PVNNNELHVC ARCFGPAKTR CSRCKSVRYC SGKCQIIHWR VAHKDECVPV ESCSSSSERV SFEKDSVLYD HGMDSTMYSN
201: NTTQAAKGKT SKSSVDFASL GISQNDITPQ INTQGRKSVG KQHSSKANRE SCRRDSATVF DSSDEAASAG GDNKTSHIKH KSRGNSYAAE TNPRRHSVDS
301: SAVQMNGQSF VSGMQESHKH ENNLGVRSSF GCPNTQYPSN GTRTATLPRT GINKSGEQSC TETSKKGQVA AVSKTVRSKD TGISEESNGI SSTMGIMKMM
401: GLRNSTKHDD RYKNLKVSSL MLFPYEEFLK FFQCEVFDLS PRGLVNCGNS CYANAVLQSL TCTKPLVAYL LRRSHSRSCS GKDWCLMCEL EQHVMMLRES
501: GGPLSASRIL SHMRSINCQI GDGSQEDAHE FLRLLVASMQ SICLERLGGE TKVDPRLQET TLVQHMFGGR LRSKVKCLRC DHESERYENI MDLTLEIYGW
601: VESLQDALTQ FTRPEDLDGE NMYRCSRCAG YVRARKELSI HEAPNILTIV LKRFQEGRYG KINKCISFPE MLDMIPFMTR TGDVPPLYML YAVIVHLDTL
701: NASFSGHYIS YVKDLRGNWY RIDDSEIHPV PMTQVMSEGA YMLFYMRSYP RPQRGEHNGK APVHHSQPRN EMKEQRKPVN RFKPRADHKN TESSSSEWSL
801: FTSSDEASFT TESTRDSFST IDYTDVCHVV DSSSPFAIFN NVYHNVEPSP HNTVACRMFS GTKPETRYFV EQETNHNNTV VLDATPSLYP IPAPYPPHDY
901: YDQSMYVNYE TNPEFNNGQD QDRTYSYW
101: TVAEQRSDSV TATCGVTVVA PVNNNELHVC ARCFGPAKTR CSRCKSVRYC SGKCQIIHWR VAHKDECVPV ESCSSSSERV SFEKDSVLYD HGMDSTMYSN
201: NTTQAAKGKT SKSSVDFASL GISQNDITPQ INTQGRKSVG KQHSSKANRE SCRRDSATVF DSSDEAASAG GDNKTSHIKH KSRGNSYAAE TNPRRHSVDS
301: SAVQMNGQSF VSGMQESHKH ENNLGVRSSF GCPNTQYPSN GTRTATLPRT GINKSGEQSC TETSKKGQVA AVSKTVRSKD TGISEESNGI SSTMGIMKMM
401: GLRNSTKHDD RYKNLKVSSL MLFPYEEFLK FFQCEVFDLS PRGLVNCGNS CYANAVLQSL TCTKPLVAYL LRRSHSRSCS GKDWCLMCEL EQHVMMLRES
501: GGPLSASRIL SHMRSINCQI GDGSQEDAHE FLRLLVASMQ SICLERLGGE TKVDPRLQET TLVQHMFGGR LRSKVKCLRC DHESERYENI MDLTLEIYGW
601: VESLQDALTQ FTRPEDLDGE NMYRCSRCAG YVRARKELSI HEAPNILTIV LKRFQEGRYG KINKCISFPE MLDMIPFMTR TGDVPPLYML YAVIVHLDTL
701: NASFSGHYIS YVKDLRGNWY RIDDSEIHPV PMTQVMSEGA YMLFYMRSYP RPQRGEHNGK APVHHSQPRN EMKEQRKPVN RFKPRADHKN TESSSSEWSL
801: FTSSDEASFT TESTRDSFST IDYTDVCHVV DSSSPFAIFN NVYHNVEPSP HNTVACRMFS GTKPETRYFV EQETNHNNTV VLDATPSLYP IPAPYPPHDY
901: YDQSMYVNYE TNPEFNNGQD QDRTYSYW
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.