Factsheet for AT5G65450.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, endoplasmic reticulum, golgi, nucleus

Predictor Summary:

nucleus 3
extracellular 2
endoplasmic reticulum 3
vacuole 2
plasma membrane 2
golgi 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, mitochondrion, nucleus
Any Predictor:	mitochondrion, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY08792	Canola	vacuole	79.33	79.44
Bra024386.1-P	Field mustard	golgi	79.47	77.71
CDY14564	Canola	golgi	78.0	76.77
VIT_00s0407g00030.t01	Wine grape	golgi, vacuole	45.07	45.68
VIT_00s0199g00030.t01	Wine grape	vacuole	48.53	40.31
KRH74502	Soybean	golgi, plasma membrane, vacuole	47.87	38.73
KRH69660	Soybean	golgi	47.47	37.95
GSMUA_Achr10P...	Banana	golgi	22.4	37.33
GSMUA_Achr7P19020_001	Banana	endoplasmic reticulum, golgi	18.4	35.75
Zm00001d050489_P001	Maize	nucleus	20.67	33.92
AT4G31670.1	Thale cress	endoplasmic reticulum, golgi	28.27	33.6
GSMUA_Achr5P22990_001	Banana	vacuole	40.27	33.59
HORVU5Hr1G069620.20	Barley	cytosol, nucleus	32.13	32.7
AT2G24640.1	Thale cress	endoplasmic reticulum, vacuole	29.07	32.44
GSMUA_Achr10P...	Banana	nucleus	17.47	32.27
Os08t0478500-01	Rice	plastid	40.4	30.98
GSMUA_AchrUn_...	Banana	golgi, vacuole	41.73	30.9
OQU80649	Sorghum	nucleus	33.07	30.77
GSMUA_Achr7P19010_001	Banana	nucleus	18.8	30.65
TraesCS5D01G252600.2	Wheat	endoplasmic reticulum, vacuole	36.4	30.17
Os09t0464400-00	Rice	endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole	37.2	30.06
TraesCS7A01G282200.4	Wheat	plastid	39.33	29.83
AT4G24560.1	Thale cress	extracellular, golgi	40.0	29.76
TraesCS7B01G179000.2	Wheat	plastid	38.93	29.41
TraesCS7D01G280800.4	Wheat	plastid	38.8	29.33
Zm00001d020769_P005	Maize	nucleus	33.47	29.32
TraesCS5B01G243400.1	Wheat	vacuole	35.73	29.26
Solyc04g076210.2.1	Tomato	nucleus	41.2	28.12
OQU89635	Sorghum	vacuole	34.13	28.07
TraesCS5A01G246000.3	Wheat	vacuole	36.0	28.07
HORVU7Hr1G064340.3	Barley	endoplasmic reticulum	36.0	27.19
AT2G22310.1	Thale cress	nucleus	13.07	26.85
AT4G39910.1	Thale cress	nucleus	13.07	26.42
AT1G17110.2	Thale cress	endoplasmic reticulum, plasma membrane	30.93	25.0
AT5G10790.1	Thale cress	cytosol	14.67	19.75
AT3G14400.1	Thale cress	mitochondrion	16.53	18.76
AT4G30890.2	Thale cress	cytosol	13.07	17.79
AT5G57990.1	Thale cress	nucleus	17.47	15.25
AT4G17895.1	Thale cress	nucleus	14.0	15.11
AT5G46740.1	Thale cress	nucleus, plastid	14.67	15.03

Protein Annotations

MapMan:19.2.3.1.1.7	Gene3D:3.30.60.180	Gene3D:3.90.70.10	EntrezGene:836670	UniProt:A0A1R7T3I4	ProteinID:ANM71188.1
ArrayExpress:AT5G65450	EnsemblPlantsGene:AT5G65450	RefSeq:AT5G65450	TAIR:AT5G65450	RefSeq:AT5G65450-TAIR-G	EnsemblPlants:AT5G65450.2
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0006464	GO:GO:0006508
GO:GO:0006511	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0009056	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016579	GO:GO:0016787	GO:GO:0019538	GO:GO:0036459
GO:GO:0046872	InterPro:IPR002893	InterPro:IPR028889	RefSeq:NP_001332735.1	PFAM:PF00443	PFAM:PF01753
ScanProsite:PS00972	ScanProsite:PS01360	PFscan:PS50235	PFscan:PS50865	InterPro:Papain_like_cys_pep_sf	InterPro:Peptidase_C19_UCH
SUPFAM:SSF144232	SUPFAM:SSF54001	TMHMM:TMhelix	Symbol:UBP17	UniParc:UPI000848850E	InterPro:USP_CS
InterPro:USP_dom	InterPro:Znf_MYND	SEG:seg	:	:	:

Description

UBP17ubiquitin-specific protease 17 [Source:TAIR;Acc:AT5G65450]

Coordinates

chr5:+:26157535..26161331

Molecular Weight (calculated)

84053.9 Da

IEP (calculated)

8.262

GRAVY (calculated)

-0.456

Length

750 amino acids

Sequence
(BLAST)

001: MPVSLESETL GFRCLLIGCM MLVFLLIRRQ WRSASVRREE VIRLIALATE ESYLAEEVRP ATVDYGGDSV SDVYRCAVCL YPTTTRCSQC KSVRYCSSKC
101: QILHWRRGHK EECRSPDYDE EKEEYVQSDY DAKESNVDFP SRGTAYESSS NVSVDVACDM STSRPSIHKV QPRSEAVDFT TSLNIKDNLY ETRPLSRKKS
201: RNRTDKVESA SNYSKGKTDA KLRKLGNQNS RRSGDSANMS ISDQFLSVGF EEEMNALKHE RITSEPSSAS AAMSSSSTLL LPSKANSKPK VSQASSSGLK
301: TSVQKVVQHF RPPQSSKKSQ PSSSIDEMSF SYELFVKLYC DRVELQPFGL VNLGNSCYAN AVLQCLAFTR PLISYLIRGL HSKTCRKKSW CFVCEFEHLI
401: LKARGGESPL SPIKILSKLQ KIGKHLGPGK EEDAHEFLRC AVDTMQSVFL KEAPAAGPFA EETTLVGLTF GGYLHSKIKC MACLHKSERP ELMMDLTVEI
501: DGDIGSLEEA LAQFTAYEVL DGENRYFCGR CKSYQKAKKK LMILEGPNIL TVVLKRFQSD NFGKLSKPIH FPELLDISPY MSDPNHGDHP VYSLYAVVVH
601: LDAMSTLFSG HYVCYIKTLD GDWFKIDDSN VFPVQLETVL LEGAYMLLYA RDSPRPVSKN GGRKSKQRRN LAAIPSRKGN KKQRDGDNNS LLPRVDWSSG
701: SLSSMFSSSD TTSSCSTKDS SGIENLSDYL FGGVEPVWKW DRHNKSQTFD

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.