Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 5
- golgi 7
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY08792 | Canola | vacuole | 92.78 | 94.39 |
| Bra024386.1-P | Field mustard | golgi | 94.88 | 94.26 |
| AT5G65450.2 | Thale cress | endoplasmic reticulum, golgi, mitochondrion, nucleus | 76.77 | 78.0 |
| VIT_00s0407g00030.t01 | Wine grape | golgi, vacuole | 41.21 | 42.43 |
| VIT_00s0199g00030.t01 | Wine grape | vacuole | 44.88 | 37.87 |
| KRH74502 | Soybean | golgi, plasma membrane, vacuole | 45.8 | 37.65 |
| KRH69660 | Soybean | golgi | 45.14 | 36.67 |
| GSMUA_Achr10P... | Banana | golgi | 21.39 | 36.22 |
| GSMUA_Achr7P19020_001 | Banana | endoplasmic reticulum, golgi | 17.85 | 35.23 |
| CDY34761 | Canola | endoplasmic reticulum, vacuole | 29.0 | 34.32 |
| CDY45587 | Canola | endoplasmic reticulum, vacuole | 28.48 | 34.28 |
| CDX75188 | Canola | vacuole | 27.43 | 34.21 |
| CDY20330 | Canola | vacuole | 28.74 | 34.06 |
| CDX68773 | Canola | nucleus, plasma membrane | 27.3 | 33.88 |
| CDX76801 | Canola | endoplasmic reticulum, golgi, vacuole | 28.61 | 33.49 |
| GSMUA_Achr5P22990_001 | Banana | vacuole | 39.24 | 33.26 |
| HORVU5Hr1G069620.20 | Barley | cytosol, nucleus | 31.76 | 32.84 |
| Zm00001d050489_P001 | Maize | nucleus | 19.42 | 32.39 |
| GSMUA_Achr10P... | Banana | nucleus | 16.54 | 31.03 |
| GSMUA_Achr7P19010_001 | Banana | nucleus | 18.5 | 30.65 |
| Os08t0478500-01 | Rice | plastid | 38.98 | 30.37 |
| TraesCS5D01G252600.2 | Wheat | endoplasmic reticulum, vacuole | 35.96 | 30.28 |
| GSMUA_AchrUn_... | Banana | golgi, vacuole | 40.16 | 30.21 |
| OQU80649 | Sorghum | nucleus | 31.63 | 29.9 |
| TraesCS7A01G282200.4 | Wheat | plastid | 38.71 | 29.83 |
| TraesCS5B01G243400.1 | Wheat | vacuole | 35.3 | 29.37 |
| TraesCS7D01G280800.4 | Wheat | plastid | 38.19 | 29.33 |
| Zm00001d020769_P005 | Maize | nucleus | 32.94 | 29.32 |
| TraesCS7B01G179000.2 | Wheat | plastid | 38.19 | 29.31 |
| CDY11021 | Canola | golgi | 38.71 | 29.24 |
| CDX92643 | Canola | golgi | 38.85 | 29.22 |
| Os09t0464400-00 | Rice | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 35.56 | 29.2 |
| CDY03441 | Canola | golgi | 38.71 | 29.12 |
| CDY34291 | Canola | golgi | 38.71 | 28.92 |
| OQU89635 | Sorghum | vacuole | 33.99 | 28.4 |
| TraesCS5A01G246000.3 | Wheat | vacuole | 35.56 | 28.17 |
| CDY13770 | Canola | nucleus | 12.86 | 27.53 |
| CDY68864 | Canola | nucleus | 13.39 | 27.42 |
| CDX76934 | Canola | nucleus | 12.73 | 27.4 |
| CDX69375 | Canola | nucleus | 13.25 | 27.22 |
| CDX96790 | Canola | nucleus | 29.66 | 27.07 |
| HORVU7Hr1G064340.3 | Barley | endoplasmic reticulum | 35.04 | 26.89 |
| CDX83925 | Canola | nucleus | 29.79 | 26.8 |
| CDY48465 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 30.58 | 26.6 |
| CDY65125 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 30.58 | 26.57 |
| Solyc04g076210.2.1 | Tomato | nucleus | 37.93 | 26.3 |
| CDY63898 | Canola | nucleus | 13.25 | 25.38 |
| CDX72275 | Canola | cytosol | 11.81 | 24.32 |
| CDY68683 | Canola | endoplasmic reticulum, vacuole | 13.78 | 21.56 |
| CDX75770 | Canola | mitochondrion, nucleus | 16.8 | 19.28 |
| CDY23262 | Canola | nucleus | 13.39 | 18.65 |
| CDX98449 | Canola | mitochondrion | 17.06 | 18.47 |
| CDX97571 | Canola | mitochondrion | 17.06 | 18.36 |
| CDX85744 | Canola | cytosol | 13.91 | 18.21 |
| CDY40119 | Canola | nucleus | 13.78 | 17.98 |
| CDX76553 | Canola | cytosol | 14.7 | 17.45 |
| CDY28224 | Canola | endoplasmic reticulum, vacuole | 13.39 | 17.29 |
| CDX87681 | Canola | nucleus | 14.17 | 17.14 |
| CDY36465 | Canola | cytosol | 13.12 | 17.04 |
| CDX68701 | Canola | endoplasmic reticulum, extracellular | 13.12 | 16.75 |
| CDY50263 | Canola | cytosol | 5.91 | 16.61 |
| CDY37145 | Canola | cytosol | 14.44 | 16.52 |
| CDY11838 | Canola | nucleus, plastid | 16.8 | 15.63 |
| CDY57464 | Canola | nucleus | 17.19 | 15.45 |
| CDX88651 | Canola | nucleus, plastid | 16.67 | 15.41 |
| CDY58499 | Canola | endoplasmic reticulum | 14.57 | 15.4 |
| CDY02782 | Canola | nucleus | 16.14 | 15.36 |
| CDY55010 | Canola | nucleus | 16.93 | 15.18 |
| CDX77686 | Canola | endoplasmic reticulum | 14.96 | 15.1 |
| CDY32735 | Canola | nucleus | 15.62 | 14.86 |
| CDX87682 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| MapMan:19.2.3.1.1.7 | Gene3D:3.30.60.180 | Gene3D:3.90.70.10 | GO:A0A078FNV4 | UniProt:A0A078FNV4 | EnsemblPlants:CDY14564 |
| ProteinID:CDY14564 | ProteinID:CDY14564.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0006464 | GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 |
| GO:GO:0016579 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0036459 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00079306001 |
| InterPro:IPR002893 | InterPro:IPR028889 | PFAM:PF00443 | PFAM:PF01753 | ScanProsite:PS00972 | ScanProsite:PS01360 |
| PFscan:PS50235 | PFscan:PS50865 | PANTHER:PTHR45492 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C19_UCH | SUPFAM:SSF144232 |
| SUPFAM:SSF54001 | SignalP:SignalP-noTM | UniParc:UPI0004EE2300 | InterPro:USP_CS | InterPro:USP_dom | InterPro:Znf_MYND |
| SEG:seg | : | : | : | : | : |
Description
BnaC03g48950DBnaC03g48950D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FNV4]
Coordinates
chrLK032044:+:697654..700907
Molecular Weight (calculated)
85043.8 Da
IEP (calculated)
8.204
GRAVY (calculated)
-0.479
Length
762 amino acids
Sequence
(BLAST)
(BLAST)
001: MSPFLLIGFL MLAFLLIRRQ WRSAAVKREE VLRLISLATE ESYLAAEEKE KEEARATVDY YGSSSSVPPD VYSCAVCHYP TTTRCAQCKS VRYCSSKCQI
101: LHWRRGHKEE CRPPPLHDYD REEDKSVKSD DGSHIEMPFR GTEFESSAAD GLTGLETNER VNNDGVSVDL ASDISTSRPS VQKVQPKSQA VDFTTSLNEK
201: DNFYETKPIS SKKSHNRTEK HSKGKATLLT DAKPQSSRRK VDTVGVSASN HLLSVEHEGE KNALGHEKTT CEPTSSAPAA ALSSSTIPLP SKAISKPKVS
301: QASSSSSVFK TSMQKVVQHF RPPKSSKLTQ PSTSVNEMSF SYEMFVKLYR DRIELHPFGL VNLGNSCYAN VVLQCLAFTR PLISYLIRGI HSKACRKKSW
401: CFVCEFEFLI LKSRGGESPL SPIKILSRLQ KIGKHLGPGK QEDAHEFLRW CAVDTMQSVF LKEADAADPL AEETTLVGLT FGGYLHSKIK CMKCLHKSER
501: TELMMDLTVE IGGDIGSLEE ALAQFTAYEV LDGENRYLCD RCKSYQKAKK KLVILEGPNI LTVVLKRFES DNFGKLSKPI HFPELLDISP YMSNPNHGDH
601: HPMYSLYAVV VHLDATSYSG HYVCYIKNLH GDWFKIDDSN VFPVPLQTVL LEGAYMLLYA RDSPRPVSKN GGGRKSKERR NLSAIPSRHD NNSKKKQEKD
701: SSSSLLPRVD LSSGSLSSMF SSSETTSSCS TKDSSGFENL SDYLFGGVEQ AWNQDPSSQT FY
101: LHWRRGHKEE CRPPPLHDYD REEDKSVKSD DGSHIEMPFR GTEFESSAAD GLTGLETNER VNNDGVSVDL ASDISTSRPS VQKVQPKSQA VDFTTSLNEK
201: DNFYETKPIS SKKSHNRTEK HSKGKATLLT DAKPQSSRRK VDTVGVSASN HLLSVEHEGE KNALGHEKTT CEPTSSAPAA ALSSSTIPLP SKAISKPKVS
301: QASSSSSVFK TSMQKVVQHF RPPKSSKLTQ PSTSVNEMSF SYEMFVKLYR DRIELHPFGL VNLGNSCYAN VVLQCLAFTR PLISYLIRGI HSKACRKKSW
401: CFVCEFEFLI LKSRGGESPL SPIKILSRLQ KIGKHLGPGK QEDAHEFLRW CAVDTMQSVF LKEADAADPL AEETTLVGLT FGGYLHSKIK CMKCLHKSER
501: TELMMDLTVE IGGDIGSLEE ALAQFTAYEV LDGENRYLCD RCKSYQKAKK KLVILEGPNI LTVVLKRFES DNFGKLSKPI HFPELLDISP YMSNPNHGDH
601: HPMYSLYAVV VHLDATSYSG HYVCYIKNLH GDWFKIDDSN VFPVPLQTVL LEGAYMLLYA RDSPRPVSKN GGGRKSKERR NLSAIPSRHD NNSKKKQEKD
701: SSSSLLPRVD LSSGSLSSMF SSSETTSSCS TKDSSGFENL SDYLFGGVEQ AWNQDPSSQT FY
001: MPVSLESETL GFRCLLIGCM MLVFLLIRRQ WRSASVRREE VIRLIALATE ESYLAEEVRP ATVDYGGDSV SDVYRCAVCL YPTTTRCSQC KSVRYCSSKC
101: QILHWRRGHK EECRSPDYDE EKEEYVQSDY DAKESNVDFP SRGTAYESSS NVSVDVACDM STSRPSIHKV QPRSEAVDFT TSLNIKDNLY ETRPLSRKKS
201: RNRTDKVESA SNYSKGKTDA KLRKLGNQNS RRSGDSANMS ISDQFLSVGF EEEMNALKHE RITSEPSSAS AAMSSSSTLL LPSKANSKPK VSQASSSGLK
301: TSVQKVVQHF RPPQSSKKSQ PSSSIDEMSF SYELFVKLYC DRVELQPFGL VNLGNSCYAN AVLQCLAFTR PLISYLIRGL HSKTCRKKSW CFVCEFEHLI
401: LKARGGESPL SPIKILSKLQ KIGKHLGPGK EEDAHEFLRC AVDTMQSVFL KEAPAAGPFA EETTLVGLTF GGYLHSKIKC MACLHKSERP ELMMDLTVEI
501: DGDIGSLEEA LAQFTAYEVL DGENRYFCGR CKSYQKAKKK LMILEGPNIL TVVLKRFQSD NFGKLSKPIH FPELLDISPY MSDPNHGDHP VYSLYAVVVH
601: LDAMSTLFSG HYVCYIKTLD GDWFKIDDSN VFPVQLETVL LEGAYMLLYA RDSPRPVSKN GGRKSKQRRN LAAIPSRKGN KKQRDGDNNS LLPRVDWSSG
701: SLSSMFSSSD TTSSCSTKDS SGIENLSDYL FGGVEPVWKW DRHNKSQTFD
101: QILHWRRGHK EECRSPDYDE EKEEYVQSDY DAKESNVDFP SRGTAYESSS NVSVDVACDM STSRPSIHKV QPRSEAVDFT TSLNIKDNLY ETRPLSRKKS
201: RNRTDKVESA SNYSKGKTDA KLRKLGNQNS RRSGDSANMS ISDQFLSVGF EEEMNALKHE RITSEPSSAS AAMSSSSTLL LPSKANSKPK VSQASSSGLK
301: TSVQKVVQHF RPPQSSKKSQ PSSSIDEMSF SYELFVKLYC DRVELQPFGL VNLGNSCYAN AVLQCLAFTR PLISYLIRGL HSKTCRKKSW CFVCEFEHLI
401: LKARGGESPL SPIKILSKLQ KIGKHLGPGK EEDAHEFLRC AVDTMQSVFL KEAPAAGPFA EETTLVGLTF GGYLHSKIKC MACLHKSERP ELMMDLTVEI
501: DGDIGSLEEA LAQFTAYEVL DGENRYFCGR CKSYQKAKKK LMILEGPNIL TVVLKRFQSD NFGKLSKPIH FPELLDISPY MSDPNHGDHP VYSLYAVVVH
601: LDAMSTLFSG HYVCYIKTLD GDWFKIDDSN VFPVQLETVL LEGAYMLLYA RDSPRPVSKN GGRKSKQRRN LAAIPSRKGN KKQRDGDNNS LLPRVDWSSG
701: SLSSMFSSSD TTSSCSTKDS SGIENLSDYL FGGVEPVWKW DRHNKSQTFD
Arabidopsis Description
UBP17ubiquitin-specific protease 17 [Source:TAIR;Acc:AT5G65450]
SUBAcon: [mitochondrion,endoplasmic reticulum,golgi,nucleus]
SUBAcon: [mitochondrion,endoplasmic reticulum,golgi,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.