Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX96790 | Canola | nucleus | 93.62 | 94.97 |
| Bra016618.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 94.33 | 89.57 |
| CDY65125 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 86.3 | 83.35 |
| CDY48465 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 84.77 | 81.96 |
| AT1G17110.2 | Thale cress | endoplasmic reticulum, plasma membrane | 85.24 | 77.8 |
| KRH13569 | Soybean | endoplasmic reticulum, plasma membrane | 51.48 | 44.08 |
| VIT_19s0140g00200.t01 | Wine grape | plasma membrane | 51.83 | 44.03 |
| KRH21804 | Soybean | endoplasmic reticulum, plasma membrane | 51.24 | 43.84 |
| GSMUA_Achr3P03560_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 42.98 | 43.44 |
| Solyc07g061780.2.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 49.23 | 43.17 |
| GSMUA_Achr3P17560_001 | Banana | endoplasmic reticulum, golgi | 42.5 | 38.88 |
| OQU84698 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 43.45 | 38.1 |
| GSMUA_Achr2P20080_001 | Banana | plasma membrane | 42.03 | 37.83 |
| Os02t0244300-01 | Rice | endoplasmic reticulum, plasma membrane | 43.45 | 37.74 |
| TraesCS6D01G179700.1 | Wheat | plasma membrane | 43.45 | 37.67 |
| Zm00001d053450_P066 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 42.98 | 37.53 |
| TraesCS6A01G192600.1 | Wheat | plasma membrane | 43.33 | 37.45 |
| TraesCS6B01G231700.4 | Wheat | plasma membrane | 43.33 | 37.3 |
| Zm00001d016165_P039 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 43.33 | 36.48 |
| CDY45587 | Canola | endoplasmic reticulum, vacuole | 26.45 | 35.39 |
| CDX75188 | Canola | vacuole | 25.5 | 35.35 |
| CDY20330 | Canola | vacuole | 26.68 | 35.15 |
| CDY34761 | Canola | endoplasmic reticulum, vacuole | 26.68 | 35.09 |
| CDX76801 | Canola | endoplasmic reticulum, golgi, vacuole | 26.68 | 34.72 |
| CDX68773 | Canola | nucleus, plasma membrane | 25.03 | 34.53 |
| CDY08792 | Canola | vacuole | 26.56 | 30.04 |
| CDY14564 | Canola | golgi | 26.8 | 29.79 |
| CDY13770 | Canola | nucleus | 11.33 | 26.97 |
| CDY68864 | Canola | nucleus | 11.69 | 26.61 |
| CDX69375 | Canola | nucleus | 11.57 | 26.42 |
| CDX76934 | Canola | nucleus | 10.98 | 26.27 |
| CDX72275 | Canola | cytosol | 11.22 | 25.68 |
| CDY63898 | Canola | nucleus | 11.69 | 24.87 |
| CDX92643 | Canola | golgi | 28.57 | 23.89 |
| CDY11021 | Canola | golgi | 28.45 | 23.89 |
| CDY34291 | Canola | golgi | 27.86 | 23.14 |
| CDY03441 | Canola | golgi | 27.51 | 23.0 |
| CDY68683 | Canola | endoplasmic reticulum, vacuole | 11.69 | 20.33 |
| CDX75770 | Canola | mitochondrion, nucleus | 15.11 | 19.28 |
| CDX87681 | Canola | nucleus | 13.7 | 18.41 |
| CDX85744 | Canola | cytosol | 12.63 | 18.38 |
| CDX76553 | Canola | cytosol | 13.93 | 18.38 |
| CDX97571 | Canola | mitochondrion | 15.35 | 18.36 |
| CDX98449 | Canola | mitochondrion | 15.23 | 18.32 |
| CDY40119 | Canola | nucleus | 12.51 | 18.15 |
| CDY23262 | Canola | nucleus | 11.57 | 17.92 |
| CDY11838 | Canola | nucleus, plastid | 17.12 | 17.7 |
| CDX88651 | Canola | nucleus, plastid | 17.12 | 17.6 |
| CDY50263 | Canola | cytosol | 5.55 | 17.34 |
| CDY36465 | Canola | cytosol | 11.69 | 16.87 |
| CDY37145 | Canola | cytosol | 13.22 | 16.82 |
| CDY57464 | Canola | nucleus | 16.77 | 16.75 |
| CDY55010 | Canola | nucleus | 16.41 | 16.35 |
| CDY02782 | Canola | nucleus | 15.35 | 16.23 |
| CDY32735 | Canola | nucleus | 15.23 | 16.1 |
| CDY28224 | Canola | endoplasmic reticulum, vacuole | 11.22 | 16.1 |
| CDX68701 | Canola | endoplasmic reticulum, extracellular | 11.33 | 16.08 |
| CDY58499 | Canola | endoplasmic reticulum | 13.11 | 15.4 |
| CDX77686 | Canola | endoplasmic reticulum | 13.7 | 15.36 |
| CDX87682 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| MapMan:19.2.3.1.1.7 | Gene3D:3.30.60.180 | Gene3D:3.90.70.10 | GO:A0A078D429 | EnsemblPlants:CDX83925 | ProteinID:CDX83925 |
| ProteinID:CDX83925.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006464 | GO:GO:0006511 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016579 | GO:GO:0016787 | GO:GO:0019538 |
| GO:GO:0036459 | EnsemblPlantsGene:GSBRNA2T00139703001 | InterPro:IPR002893 | InterPro:IPR028889 | PFAM:PF00443 | PFAM:PF01753 |
| ScanProsite:PS00972 | PFscan:PS50235 | PFscan:PS50865 | PANTHER:PTHR45492 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C19_UCH |
| SUPFAM:SSF144232 | SUPFAM:SSF54001 | UniParc:UPI0004EE2931 | InterPro:USP_CS | InterPro:USP_dom | InterPro:Znf_MYND |
| SEG:seg | : | : | : | : | : |
Description
BnaC08g17200D
Coordinates
chrLK031834:+:1268802..1273680
Molecular Weight (calculated)
95082.2 Da
IEP (calculated)
7.684
GRAVY (calculated)
-0.559
Length
847 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAEEAFRAE TEVNVNRGVR FEAVATENRA LRTKIKAASG AVRDDFVAGV SGTVSEPVAA AACGVPVNNE FHVCARCFSP AKTRCSRCKS VRYCSGQCQI
101: IHWRLAHKDE CIPVEACSSS SERVSFENDS VLHDQGVDST MYSNGTKQKA KGKTSKSSVE FESLGISTPQ VNTQGRKSVG KPDSYKSNRE SFSGEAACAG
201: GEYKKGQTKH KSRSTIGAVE TNSRRHSVDN SCMQMNGQAF VSGMQETCES NLGARSSFGC PNAQYPSNGT RTATLRKSGE QPCTETSKKG LVPAVSKAVR
301: SKDTCIAEES NGISSTTGLM KMMGLRNSTK HDDRLKNLRS ISLIFQMLFP YEEFVKFFQC EVFYLSPRGL VNCGNSCYAN AVLQSLTCTK PLVAYLLQRS
401: HSRSCSGKDW CLMCELEQHV MMLRESGGPL SASRILSQMR SINCQIGDGS QEDAHEFLRL LVASMQSICL ERLGGETKVD PRLQETTLVQ HMFGGRLRSK
501: VKCLRCGHES ERYENIMDLT LEIYGWVESL QDALTQFTRP EDLDGENMYR CSRCAGYVKA RKELSIHEAP NILTIVLKRF QEGRYGKINK CISFPEMLDM
601: IPFMTRTGDV PPLYMLYAVI VHLDTLNASF SGHYISYVKD LRGNWFRIDD SEIHQVPMTQ VMSEGAYMLF YMRSYPRPLR GEHNGKAQVR HSQPQPRDEM
701: KEQRKPVNRF KPRADHRKNL ESSSEWSLFT SSDEASFTTE STRDSFSTVD YTDGCNVLDS SSPFSIFSNL HHNVEPSPHN TVACRMFSGT KSETRYFVEE
801: ETNHNNTVVM DSAPTSHEYY QQSMYVNYET NPGFNCQDET YSYEQNW
101: IHWRLAHKDE CIPVEACSSS SERVSFENDS VLHDQGVDST MYSNGTKQKA KGKTSKSSVE FESLGISTPQ VNTQGRKSVG KPDSYKSNRE SFSGEAACAG
201: GEYKKGQTKH KSRSTIGAVE TNSRRHSVDN SCMQMNGQAF VSGMQETCES NLGARSSFGC PNAQYPSNGT RTATLRKSGE QPCTETSKKG LVPAVSKAVR
301: SKDTCIAEES NGISSTTGLM KMMGLRNSTK HDDRLKNLRS ISLIFQMLFP YEEFVKFFQC EVFYLSPRGL VNCGNSCYAN AVLQSLTCTK PLVAYLLQRS
401: HSRSCSGKDW CLMCELEQHV MMLRESGGPL SASRILSQMR SINCQIGDGS QEDAHEFLRL LVASMQSICL ERLGGETKVD PRLQETTLVQ HMFGGRLRSK
501: VKCLRCGHES ERYENIMDLT LEIYGWVESL QDALTQFTRP EDLDGENMYR CSRCAGYVKA RKELSIHEAP NILTIVLKRF QEGRYGKINK CISFPEMLDM
601: IPFMTRTGDV PPLYMLYAVI VHLDTLNASF SGHYISYVKD LRGNWFRIDD SEIHQVPMTQ VMSEGAYMLF YMRSYPRPLR GEHNGKAQVR HSQPQPRDEM
701: KEQRKPVNRF KPRADHRKNL ESSSEWSLFT SSDEASFTTE STRDSFSTVD YTDGCNVLDS SSPFSIFSNL HHNVEPSPHN TVACRMFSGT KSETRYFVEE
801: ETNHNNTVVM DSAPTSHEYY QQSMYVNYET NPGFNCQDET YSYEQNW
001: MLEPRGADIP ILFLVLVVLP VVAYILLGKW SNISEKRVRA NLLAQMAAEE ALRAETVVNA DRGVRFESVA TENRAQRTRT KTVSAGGGAV RAEFDAGARE
101: TVAEQRSDSV TATCGVTVVA PVNNNELHVC ARCFGPAKTR CSRCKSVRYC SGKCQIIHWR VAHKDECVPV ESCSSSSERV SFEKDSVLYD HGMDSTMYSN
201: NTTQAAKGKT SKSSVDFASL GISQNDITPQ INTQGRKSVG KQHSSKANRE SCRRDSATVF DSSDEAASAG GDNKTSHIKH KSRGNSYAAE TNPRRHSVDS
301: SAVQMNGQSF VSGMQESHKH ENNLGVRSSF GCPNTQYPSN GTRTATLPRT GINKSGEQSC TETSKKGQVA AVSKTVRSKD TGISEESNGI SSTMGIMKMM
401: GLRNSTKHDD RYKNLKVSSL MLFPYEEFLK FFQCEVFDLS PRGLVNCGNS CYANAVLQSL TCTKPLVAYL LRRSHSRSCS GKDWCLMCEL EQHVMMLRES
501: GGPLSASRIL SHMRSINCQI GDGSQEDAHE FLRLLVASMQ SICLERLGGE TKVDPRLQET TLVQHMFGGR LRSKVKCLRC DHESERYENI MDLTLEIYGW
601: VESLQDALTQ FTRPEDLDGE NMYRCSRCAG YVRARKELSI HEAPNILTIV LKRFQEGRYG KINKCISFPE MLDMIPFMTR TGDVPPLYML YAVIVHLDTL
701: NASFSGHYIS YVKDLRGNWY RIDDSEIHPV PMTQVMSEGA YMLFYMRSYP RPQRGEHNGK APVHHSQPRN EMKEQRKPVN RFKPRADHKN TESSSSEWSL
801: FTSSDEASFT TESTRDSFST IDYTDVCHVV DSSSPFAIFN NVYHNVEPSP HNTVACRMFS GTKPETRYFV EQETNHNNTV VLDATPSLYP IPAPYPPHDY
901: YDQSMYVNYE TNPEFNNGQD QDRTYSYW
101: TVAEQRSDSV TATCGVTVVA PVNNNELHVC ARCFGPAKTR CSRCKSVRYC SGKCQIIHWR VAHKDECVPV ESCSSSSERV SFEKDSVLYD HGMDSTMYSN
201: NTTQAAKGKT SKSSVDFASL GISQNDITPQ INTQGRKSVG KQHSSKANRE SCRRDSATVF DSSDEAASAG GDNKTSHIKH KSRGNSYAAE TNPRRHSVDS
301: SAVQMNGQSF VSGMQESHKH ENNLGVRSSF GCPNTQYPSN GTRTATLPRT GINKSGEQSC TETSKKGQVA AVSKTVRSKD TGISEESNGI SSTMGIMKMM
401: GLRNSTKHDD RYKNLKVSSL MLFPYEEFLK FFQCEVFDLS PRGLVNCGNS CYANAVLQSL TCTKPLVAYL LRRSHSRSCS GKDWCLMCEL EQHVMMLRES
501: GGPLSASRIL SHMRSINCQI GDGSQEDAHE FLRLLVASMQ SICLERLGGE TKVDPRLQET TLVQHMFGGR LRSKVKCLRC DHESERYENI MDLTLEIYGW
601: VESLQDALTQ FTRPEDLDGE NMYRCSRCAG YVRARKELSI HEAPNILTIV LKRFQEGRYG KINKCISFPE MLDMIPFMTR TGDVPPLYML YAVIVHLDTL
701: NASFSGHYIS YVKDLRGNWY RIDDSEIHPV PMTQVMSEGA YMLFYMRSYP RPQRGEHNGK APVHHSQPRN EMKEQRKPVN RFKPRADHKN TESSSSEWSL
801: FTSSDEASFT TESTRDSFST IDYTDVCHVV DSSSPFAIFN NVYHNVEPSP HNTVACRMFS GTKPETRYFV EQETNHNNTV VLDATPSLYP IPAPYPPHDY
901: YDQSMYVNYE TNPEFNNGQD QDRTYSYW
Arabidopsis Description
UBP15Ubiquitin-specific protease 15 [Source:UniProtKB/TrEMBL;Acc:F4I642]
SUBAcon: [endoplasmic reticulum,plasma membrane]
SUBAcon: [endoplasmic reticulum,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.