Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra011230.1-P | Field mustard | endoplasmic reticulum, vacuole | 94.97 | 96.1 |
| CDY28224 | Canola | endoplasmic reticulum, vacuole | 94.97 | 96.1 |
| CDX72275 | Canola | cytosol | 55.61 | 89.73 |
| CDY23262 | Canola | nucleus | 77.72 | 84.83 |
| CDY36465 | Canola | cytosol | 82.91 | 84.33 |
| AT4G30890.2 | Thale cress | cytosol | 72.03 | 78.04 |
| GSMUA_Achr1P11380_001 | Banana | cytosol | 43.72 | 69.97 |
| GSMUA_Achr8P09770_001 | Banana | cytosol | 42.04 | 58.64 |
| KRH23933 | Soybean | cytosol | 52.93 | 58.41 |
| KRH39864 | Soybean | cytosol | 51.93 | 58.27 |
| VIT_13s0019g01690.t01 | Wine grape | cytosol | 52.6 | 56.78 |
| OQU81355 | Sorghum | cytosol, nucleus, plastid | 7.04 | 53.85 |
| Solyc01g068240.2.1 | Tomato | cytosol | 46.73 | 52.35 |
| PGSC0003DMT400033175 | Potato | mitochondrion | 13.74 | 49.1 |
| Zm00001d022414_P001 | Maize | cytosol | 45.39 | 49.09 |
| PGSC0003DMT400033182 | Potato | cytosol | 11.39 | 48.23 |
| Os07t0661300-01 | Rice | cytosol, plasma membrane | 38.19 | 46.63 |
| PGSC0003DMT400033184 | Potato | cytosol | 14.24 | 46.45 |
| PGSC0003DMT400033173 | Potato | mitochondrion | 21.27 | 35.77 |
| TraesCS2A01G127200.3 | Wheat | cytosol | 44.39 | 35.43 |
| HORVU2Hr1G022340.2 | Barley | cytosol | 43.89 | 34.52 |
| TraesCS2D01G129600.2 | Wheat | cytosol | 44.39 | 34.37 |
| TraesCS2B01G149000.2 | Wheat | cytosol | 44.05 | 34.11 |
| CDX76934 | Canola | nucleus | 15.41 | 25.99 |
| CDY13770 | Canola | nucleus | 15.41 | 25.84 |
| CDY68864 | Canola | nucleus | 15.58 | 25.0 |
| CDX69375 | Canola | nucleus | 15.41 | 24.8 |
| CDY63898 | Canola | nucleus | 15.41 | 23.12 |
| Zm00001d007096_P007 | Maize | mitochondrion | 43.72 | 22.06 |
| CDY68683 | Canola | endoplasmic reticulum, vacuole | 15.91 | 19.51 |
| CDY50263 | Canola | cytosol | 8.04 | 17.71 |
| CDY45587 | Canola | endoplasmic reticulum, vacuole | 17.09 | 16.11 |
| CDX75188 | Canola | vacuole | 16.42 | 16.04 |
| CDY34761 | Canola | endoplasmic reticulum, vacuole | 17.25 | 15.99 |
| CDX68773 | Canola | nucleus, plasma membrane | 16.42 | 15.96 |
| CDY40119 | Canola | nucleus | 15.58 | 15.92 |
| CDY20330 | Canola | vacuole | 17.09 | 15.86 |
| CDX76801 | Canola | endoplasmic reticulum, golgi, vacuole | 16.92 | 15.51 |
| CDX85744 | Canola | cytosol | 14.91 | 15.29 |
| CDX87681 | Canola | nucleus | 15.08 | 14.29 |
| CDY37145 | Canola | cytosol | 15.08 | 13.51 |
| CDY58499 | Canola | endoplasmic reticulum | 16.25 | 13.45 |
| CDX76553 | Canola | cytosol | 14.41 | 13.4 |
| CDY14564 | Canola | golgi | 16.75 | 13.12 |
| CDY08792 | Canola | vacuole | 16.42 | 13.08 |
| CDX75770 | Canola | mitochondrion, nucleus | 14.24 | 12.8 |
| CDX98449 | Canola | mitochondrion | 14.74 | 12.5 |
| CDX77686 | Canola | endoplasmic reticulum | 15.75 | 12.45 |
| CDX97571 | Canola | mitochondrion | 14.74 | 12.43 |
| CDY32735 | Canola | nucleus | 16.08 | 11.98 |
| CDY02782 | Canola | nucleus | 15.91 | 11.86 |
| CDY11838 | Canola | nucleus, plastid | 15.91 | 11.6 |
| CDY57464 | Canola | nucleus | 16.42 | 11.56 |
| CDX88651 | Canola | nucleus, plastid | 15.91 | 11.53 |
| CDX96790 | Canola | nucleus | 16.08 | 11.5 |
| CDY55010 | Canola | nucleus | 16.25 | 11.41 |
| CDX83925 | Canola | nucleus | 16.08 | 11.33 |
| CDY48465 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 16.25 | 11.07 |
| CDY11021 | Canola | golgi | 18.59 | 11.0 |
| CDY65125 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 16.08 | 10.95 |
| CDY03441 | Canola | golgi | 18.26 | 10.76 |
| CDX92643 | Canola | golgi | 18.09 | 10.66 |
| CDY34291 | Canola | golgi | 18.09 | 10.59 |
| CDX87682 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| MapMan:19.2.3.1.1.10 | Gene3D:3.90.70.10 | GO:A0A078BV30 | EnsemblPlants:CDX68701 | ProteinID:CDX68701 | ProteinID:CDX68701.1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006464 | GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016579 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0036459 |
| EnsemblPlantsGene:GSBRNA2T00130382001 | InterPro:IPR028889 | PFAM:PF00443 | ScanProsite:PS00972 | ScanProsite:PS00973 | PFscan:PS50235 |
| PANTHER:PTHR44747 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C19_UCH | SUPFAM:SSF54001 | UniParc:UPI0004EF0970 | InterPro:USP_CS |
| InterPro:USP_dom | SEG:seg | : | : | : | : |
Description
BnaC01g07520D
Coordinates
chrLK031789:-:812818..815972
Molecular Weight (calculated)
65640.9 Da
IEP (calculated)
8.454
GRAVY (calculated)
-0.390
Length
597 amino acids
Sequence
(BLAST)
(BLAST)
001: MLVATWLLYC NYSLCTYLSD FDLVFVFGSF TEHETRSLLE QQKPIKAPQN HKEKSLGSIQ FGSFNLVTGS SPVSTNGELK KAQAADGAVK SRPSSSHKED
101: SAVSQKRVDA PRPSSSHKED RSIQSAVSQK RLDAPRPSSS DKVAKLPVKH SSEVPERVVE NGTIKEVSER KPLNNGVAVK AGLEKLCVSD GESDALYKAS
201: SSKFQALDSE ILLSGSSPAC IPRKNNQMVV HTEQPAPPLK DFTPRGLINA GNLCFLNATL QALLSCSPFV QLLQGIQLQD IPKDESPTLA AFSEFISELD
301: APSSSTFRNN VAVVESGRPF TPAMFETVLR NFTPDVLNNM SGRPRQEDAQ EFLSFIMDQM HDELLKLRDE SPRLTGSKSS VLSSASDDDE WETVGPKNKS
401: AVTRTQSFVP SQLSDIFGGE LRSVVKAQGN KDSATVQPYL LLHLDIHPEA VCTIEDALHL FSAPEDLEGY RASVTGKAGV VSARKSIKIQ KLSKIMILHL
501: MRFSYGNQGS TKLHKPVHFP LKLNLGRYLL ASPSNGLKYE LVATITHHGR DPSKGHYTAD ARRKNNQWLR FDDASVTAIG TKQVLHDQAY VLFYKQV
101: SAVSQKRVDA PRPSSSHKED RSIQSAVSQK RLDAPRPSSS DKVAKLPVKH SSEVPERVVE NGTIKEVSER KPLNNGVAVK AGLEKLCVSD GESDALYKAS
201: SSKFQALDSE ILLSGSSPAC IPRKNNQMVV HTEQPAPPLK DFTPRGLINA GNLCFLNATL QALLSCSPFV QLLQGIQLQD IPKDESPTLA AFSEFISELD
301: APSSSTFRNN VAVVESGRPF TPAMFETVLR NFTPDVLNNM SGRPRQEDAQ EFLSFIMDQM HDELLKLRDE SPRLTGSKSS VLSSASDDDE WETVGPKNKS
401: AVTRTQSFVP SQLSDIFGGE LRSVVKAQGN KDSATVQPYL LLHLDIHPEA VCTIEDALHL FSAPEDLEGY RASVTGKAGV VSARKSIKIQ KLSKIMILHL
501: MRFSYGNQGS TKLHKPVHFP LKLNLGRYLL ASPSNGLKYE LVATITHHGR DPSKGHYTAD ARRKNNQWLR FDDASVTAIG TKQVLHDQAY VLFYKQV
001: MSEKKVFVFG SFTEHETRSF FEQKPTKDPQ NSKDKCVGSI QFGSLNLAAE NSSVNTNGEL KKGEADGTVK SAGSQERLDA SRPASSDKNN DSDAKLPRKN
101: SLRVPEHVVQ NGIIKEISES NKSLNNGVAV KTDPIGLDNL SMSDGESDPV YKASSSKFQA LDNEDFSSDS SSGSIQRKKN LKVPTESVPP VKDFTPRGLI
201: NAGNLCFLNA TLQALLSCSP FVQLLQKIQL QDIPKADSPT LAAFSEFISE LDVPSSSSIR NNVTVVEAGR PFRPAMFEGV LRNFTPDVLN NMSGRPRQED
301: AQEFLSFIMD QMHDELLKLK EQSPKVTASK SSVISSANDD GDEWETVGPK NKSAVTRTQS FVPSELSEIF GGQLKSVVKA KGTKASATVQ PYLLLHLDIH
401: PDGVQGIEDA LHLFSAQEDL EGYRASVTGK TGVVSASKSI KIQKLSKIMI LHLMRFSYGS QGSTKLRKGV KFPLELNLNR SHLVSLSNES LRYELVATIT
501: HHGWDPSKGH YTTDARRKNG QWLRFDDASV TPIGTKLVLH DQAYVLFYKQ V
101: SLRVPEHVVQ NGIIKEISES NKSLNNGVAV KTDPIGLDNL SMSDGESDPV YKASSSKFQA LDNEDFSSDS SSGSIQRKKN LKVPTESVPP VKDFTPRGLI
201: NAGNLCFLNA TLQALLSCSP FVQLLQKIQL QDIPKADSPT LAAFSEFISE LDVPSSSSIR NNVTVVEAGR PFRPAMFEGV LRNFTPDVLN NMSGRPRQED
301: AQEFLSFIMD QMHDELLKLK EQSPKVTASK SSVISSANDD GDEWETVGPK NKSAVTRTQS FVPSELSEIF GGQLKSVVKA KGTKASATVQ PYLLLHLDIH
401: PDGVQGIEDA LHLFSAQEDL EGYRASVTGK TGVVSASKSI KIQKLSKIMI LHLMRFSYGS QGSTKLRKGV KFPLELNLNR SHLVSLSNES LRYELVATIT
501: HHGWDPSKGH YTTDARRKNG QWLRFDDASV TPIGTKLVLH DQAYVLFYKQ V
Arabidopsis Description
UBP24Ubiquitin carboxyl-terminal hydrolase 24 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPS3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.