Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX72275 | Canola | cytosol | 62.34 | 92.16 |
| Bra010268.1-P | Field mustard | cytosol | 93.6 | 89.98 |
| CDY36465 | Canola | cytosol | 93.42 | 87.05 |
| CDY28224 | Canola | endoplasmic reticulum, vacuole | 85.56 | 79.32 |
| AT4G30890.2 | Thale cress | cytosol | 78.98 | 78.4 |
| CDX68701 | Canola | endoplasmic reticulum, extracellular | 84.83 | 77.72 |
| GSMUA_Achr1P11380_001 | Banana | cytosol | 47.9 | 70.24 |
| KRH23933 | Soybean | cytosol | 58.14 | 58.78 |
| GSMUA_Achr8P09770_001 | Banana | cytosol | 45.7 | 58.41 |
| KRH39864 | Soybean | cytosol | 56.67 | 58.27 |
| OQU81355 | Sorghum | cytosol, nucleus, plastid | 8.23 | 57.69 |
| VIT_13s0019g01690.t01 | Wine grape | cytosol | 58.14 | 57.5 |
| Solyc01g068240.2.1 | Tomato | cytosol | 51.92 | 53.28 |
| PGSC0003DMT400033182 | Potato | cytosol | 12.8 | 49.65 |
| Zm00001d022414_P001 | Maize | cytosol | 49.73 | 49.28 |
| PGSC0003DMT400033175 | Potato | mitochondrion | 14.81 | 48.5 |
| PGSC0003DMT400033184 | Potato | cytosol | 15.9 | 47.54 |
| Os07t0661300-01 | Rice | cytosol, plasma membrane | 42.41 | 47.44 |
| TraesCS2A01G127200.3 | Wheat | cytosol | 48.81 | 35.7 |
| PGSC0003DMT400033173 | Potato | mitochondrion | 23.03 | 35.49 |
| HORVU2Hr1G022340.2 | Barley | cytosol | 48.26 | 34.78 |
| TraesCS2D01G129600.2 | Wheat | cytosol | 48.45 | 34.37 |
| TraesCS2B01G149000.2 | Wheat | cytosol | 47.9 | 33.98 |
| CDX76934 | Canola | nucleus | 16.64 | 25.71 |
| CDY13770 | Canola | nucleus | 16.64 | 25.56 |
| CDY68864 | Canola | nucleus | 16.82 | 24.73 |
| CDX69375 | Canola | nucleus | 16.64 | 24.53 |
| CDY63898 | Canola | nucleus | 16.82 | 23.12 |
| Zm00001d007096_P007 | Maize | mitochondrion | 47.71 | 22.06 |
| CDY68683 | Canola | endoplasmic reticulum, vacuole | 17.18 | 19.3 |
| CDY50263 | Canola | cytosol | 8.59 | 17.34 |
| CDY45587 | Canola | endoplasmic reticulum, vacuole | 18.65 | 16.11 |
| CDX75188 | Canola | vacuole | 17.92 | 16.04 |
| CDY34761 | Canola | endoplasmic reticulum, vacuole | 18.83 | 15.99 |
| CDX68773 | Canola | nucleus, plasma membrane | 17.92 | 15.96 |
| CDY20330 | Canola | vacuole | 18.65 | 15.86 |
| CDY40119 | Canola | nucleus | 16.64 | 15.58 |
| CDX76801 | Canola | endoplasmic reticulum, golgi, vacuole | 18.28 | 15.36 |
| CDX85744 | Canola | cytosol | 16.27 | 15.29 |
| CDX87681 | Canola | nucleus | 16.09 | 13.97 |
| CDX76553 | Canola | cytosol | 15.72 | 13.4 |
| CDY14564 | Canola | golgi | 18.65 | 13.39 |
| CDY08792 | Canola | vacuole | 18.28 | 13.35 |
| CDY37145 | Canola | cytosol | 16.09 | 13.21 |
| CDY58499 | Canola | endoplasmic reticulum | 17.18 | 13.04 |
| CDX75770 | Canola | mitochondrion, nucleus | 15.17 | 12.5 |
| CDY32735 | Canola | nucleus | 17.92 | 12.23 |
| CDX98449 | Canola | mitochondrion | 15.72 | 12.22 |
| CDX97571 | Canola | mitochondrion | 15.72 | 12.15 |
| CDY02782 | Canola | nucleus | 17.73 | 12.11 |
| CDX77686 | Canola | endoplasmic reticulum | 16.64 | 12.05 |
| CDY11838 | Canola | nucleus, plastid | 17.73 | 11.84 |
| CDX88651 | Canola | nucleus, plastid | 17.73 | 11.77 |
| CDX96790 | Canola | nucleus | 17.92 | 11.74 |
| CDY48465 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 18.65 | 11.64 |
| CDX83925 | Canola | nucleus | 17.92 | 11.57 |
| CDY57464 | Canola | nucleus | 17.92 | 11.56 |
| CDY55010 | Canola | nucleus | 17.92 | 11.53 |
| CDY65125 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 18.46 | 11.52 |
| CDY11021 | Canola | golgi | 20.29 | 11.0 |
| CDY03441 | Canola | golgi | 20.11 | 10.86 |
| CDY34291 | Canola | golgi | 19.93 | 10.69 |
| CDX92643 | Canola | golgi | 19.56 | 10.56 |
| CDX87682 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| MapMan:19.2.3.1.1.10 | Gene3D:3.90.70.10 | GO:A0A078GDW1 | UniProt:A0A078GDW1 | EnsemblPlants:CDY23262 | ProteinID:CDY23262 |
| ProteinID:CDY23262.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006464 | GO:GO:0006511 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016579 | GO:GO:0016787 | GO:GO:0019538 |
| GO:GO:0036459 | EnsemblPlantsGene:GSBRNA2T00021825001 | InterPro:IPR028889 | PFAM:PF00443 | ScanProsite:PS00972 | ScanProsite:PS00973 |
| PFscan:PS50235 | PANTHER:PTHR44747 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C19_UCH | SUPFAM:SSF54001 | UniParc:UPI0004EE3B84 |
| InterPro:USP_CS | InterPro:USP_dom | SEG:seg | : | : | : |
Description
BnaA08g12840DBnaA08g12840D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GDW1]
Coordinates
chrLK032142:-:118461..121657
Molecular Weight (calculated)
60007.0 Da
IEP (calculated)
7.740
GRAVY (calculated)
-0.421
Length
547 amino acids
Sequence
(BLAST)
(BLAST)
001: MSDKKVFVFG SFTEHETRSL LEQKPINPPQ CHKEKSVKSI QFGSFNPVNS ANGELKKGPA DDKTFQYAES QKSLDASRPP SSDKINDNTA KKLSGKHSSG
101: EHVEENGIIN EVSERNPPLN NGVAVKAADH IGLEKLCVSD GESDSLCIAS SSKFQALDTD IFPNDSSSGT TIPRKNSHMV SAESIPAMKD FTPRGLINAG
201: NLCFLNATLQ ALLSCSPFVQ LLQGIQLQAI PKAESPTLAA FSEFISELDM PSSSSFRNNV AVVESGRPFT PAMFEGVLRN FTPDVLNNMS GRPRSEDAQE
301: FLSFIMDQMH DELLKLREVS PKLNASKSSV VSSANDDDEW ETVGPKNKSA VTRTQSFVPS QLSDIFGGQL RSVVKAKGNK DSATVQPYLL LHLDIHPEAV
401: STIEDALHLF SAPEDLEGYR ASVTGKAGVV SARKSIKIQK LSKIMILHLM RFSYGNQGST KLHKRVHFPL DLNLGRYLLV SPSNGGLKYE LVATITHHGR
501: DPSKGHYTTD ARRKNNQWLR FDDASVTAVG TKQVLHDQAY VLFYKQV
101: EHVEENGIIN EVSERNPPLN NGVAVKAADH IGLEKLCVSD GESDSLCIAS SSKFQALDTD IFPNDSSSGT TIPRKNSHMV SAESIPAMKD FTPRGLINAG
201: NLCFLNATLQ ALLSCSPFVQ LLQGIQLQAI PKAESPTLAA FSEFISELDM PSSSSFRNNV AVVESGRPFT PAMFEGVLRN FTPDVLNNMS GRPRSEDAQE
301: FLSFIMDQMH DELLKLREVS PKLNASKSSV VSSANDDDEW ETVGPKNKSA VTRTQSFVPS QLSDIFGGQL RSVVKAKGNK DSATVQPYLL LHLDIHPEAV
401: STIEDALHLF SAPEDLEGYR ASVTGKAGVV SARKSIKIQK LSKIMILHLM RFSYGNQGST KLHKRVHFPL DLNLGRYLLV SPSNGGLKYE LVATITHHGR
501: DPSKGHYTTD ARRKNNQWLR FDDASVTAVG TKQVLHDQAY VLFYKQV
001: MSEKKVFVFG SFTEHETRSF FEQKPTKDPQ NSKDKCVGSI QFGSLNLAAE NSSVNTNGEL KKGEADGTVK SAGSQERLDA SRPASSDKNN DSDAKLPRKN
101: SLRVPEHVVQ NGIIKEISES NKSLNNGVAV KTDPIGLDNL SMSDGESDPV YKASSSKFQA LDNEDFSSDS SSGSIQRKKN LKVPTESVPP VKDFTPRGLI
201: NAGNLCFLNA TLQALLSCSP FVQLLQKIQL QDIPKADSPT LAAFSEFISE LDVPSSSSIR NNVTVVEAGR PFRPAMFEGV LRNFTPDVLN NMSGRPRQED
301: AQEFLSFIMD QMHDELLKLK EQSPKVTASK SSVISSANDD GDEWETVGPK NKSAVTRTQS FVPSELSEIF GGQLKSVVKA KGTKASATVQ PYLLLHLDIH
401: PDGVQGIEDA LHLFSAQEDL EGYRASVTGK TGVVSASKSI KIQKLSKIMI LHLMRFSYGS QGSTKLRKGV KFPLELNLNR SHLVSLSNES LRYELVATIT
501: HHGWDPSKGH YTTDARRKNG QWLRFDDASV TPIGTKLVLH DQAYVLFYKQ V
101: SLRVPEHVVQ NGIIKEISES NKSLNNGVAV KTDPIGLDNL SMSDGESDPV YKASSSKFQA LDNEDFSSDS SSGSIQRKKN LKVPTESVPP VKDFTPRGLI
201: NAGNLCFLNA TLQALLSCSP FVQLLQKIQL QDIPKADSPT LAAFSEFISE LDVPSSSSIR NNVTVVEAGR PFRPAMFEGV LRNFTPDVLN NMSGRPRQED
301: AQEFLSFIMD QMHDELLKLK EQSPKVTASK SSVISSANDD GDEWETVGPK NKSAVTRTQS FVPSELSEIF GGQLKSVVKA KGTKASATVQ PYLLLHLDIH
401: PDGVQGIEDA LHLFSAQEDL EGYRASVTGK TGVVSASKSI KIQKLSKIMI LHLMRFSYGS QGSTKLRKGV KFPLELNLNR SHLVSLSNES LRYELVATIT
501: HHGWDPSKGH YTTDARRKNG QWLRFDDASV TPIGTKLVLH DQAYVLFYKQ V
Arabidopsis Description
UBP24Ubiquitin carboxyl-terminal hydrolase 24 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPS3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.