Factsheet for Zm00001d022414_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os07t0661300-01	Rice	cytosol, plasma membrane	60.69	68.51
OQU90420	Sorghum	mitochondrion	90.22	67.57
GSMUA_Achr1P11380_001	Banana	cytosol	44.57	65.95
CDX72275	Canola	cytosol	42.39	63.24
Bra024037.1-P	Field mustard	cytosol	42.57	58.75
GSMUA_Achr8P09770_001	Banana	cytosol	44.57	57.48
KRH23933	Soybean	cytosol	50.72	51.76
TraesCS2A01G127200.3	Wheat	cytosol	70.11	51.74
KRH39864	Soybean	cytosol	49.64	51.5
VIT_13s0019g01690.t01	Wine grape	cytosol	51.09	50.99
TraesCS2D01G129600.2	Wheat	cytosol	70.65	50.58
Solyc01g068240.2.1	Tomato	cytosol	48.73	50.47
HORVU2Hr1G022340.2	Barley	cytosol	69.38	50.46
PGSC0003DMT400034298	Potato	cytosol	48.55	50.19
Solyc11g065210.1.1	Tomato	cytosol	48.19	49.81
TraesCS2B01G149000.2	Wheat	cytosol	69.57	49.81
CDY23262	Canola	nucleus	49.28	49.73
Bra010268.1-P	Field mustard	cytosol	50.36	48.86
AT4G30890.2	Thale cress	cytosol	48.01	48.09
CDY36465	Canola	cytosol	50.0	47.02
CDY28224	Canola	endoplasmic reticulum, vacuole	49.28	46.1
Bra011230.1-P	Field mustard	endoplasmic reticulum, vacuole	49.28	46.1
PGSC0003DMT400033182	Potato	cytosol	11.78	46.1
PGSC0003DMT400033184	Potato	cytosol	15.22	45.9
PGSC0003DMT400033175	Potato	mitochondrion	13.77	45.51
CDX68701	Canola	endoplasmic reticulum, extracellular	49.09	45.39
Zm00001d007096_P007	Maize	mitochondrion	89.67	41.84
PGSC0003DMT400033173	Potato	mitochondrion	22.28	34.65
Zm00001d003476_P002	Maize	cytosol	16.49	24.73
Zm00001d025570_P003	Maize	nucleus	16.49	24.73
Zm00001d028005_P001	Maize	nucleus	16.12	24.32
Zm00001d000312_P002	Maize	plastid	11.41	22.42
Zm00001d016918_P001	Maize	plastid	16.85	22.3
Zm00001d002086_P001	Maize	plastid	18.3	17.94
Zm00001d051513_P001	Maize	nucleus	16.67	15.57
Zm00001d047023_P001	Maize	nucleus	14.67	13.04
Zm00001d010710_P002	Maize	plastid	15.76	12.74
Zm00001d050489_P001	Maize	nucleus	10.51	12.69
Zm00001d017686_P002	Maize	mitochondrion, nucleus	16.67	12.43
Zm00001d020769_P005	Maize	nucleus	18.12	11.68
Zm00001d045104_P005	Maize	nucleus	18.66	11.41
Zm00001d053450_P066	Maize	endoplasmic reticulum, plasma membrane, vacuole	19.57	11.13
Zm00001d016165_P039	Maize	endoplasmic reticulum, plasma membrane, vacuole	19.57	10.74
Zm00001d036707_P006	Maize	plasma membrane	18.3	10.54
Zm00001d000313_P001	Maize	nucleus	3.8	5.68

Protein Annotations

MapMan:19.2.3.1.1.10	Gene3D:3.90.70.10	UniProt:A0A1D6IME8	GO:GO:0003674	GO:GO:0003824	GO:GO:0006464
GO:GO:0006511	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016579
GO:GO:0016787	GO:GO:0019538	GO:GO:0036459	InterPro:IPR028889	ProteinID:ONM60462.1	PFAM:PF00443
ScanProsite:PS00972	ScanProsite:PS00973	PFscan:PS50235	PANTHER:PTHR44747	InterPro:Papain_like_cys_pep_sf	InterPro:Peptidase_C19_UCH
SUPFAM:SSF54001	UniParc:UPI000842C6C7	InterPro:USP_CS	InterPro:USP_dom	EnsemblPlantsGene:Zm00001d022414	EnsemblPlants:Zm00001d022414_P001
EnsemblPlants:Zm00001d022414_T001	SEG:seg	:	:	:	:

Description

Ubiquitin carboxyl-terminal hydrolase 24

Coordinates

chr7:+:177124433..177130239

Molecular Weight (calculated)

60177.2 Da

IEP (calculated)

9.185

GRAVY (calculated)

-0.278

Length

552 amino acids

Sequence
(BLAST)

001: MSSGGEKMLL FGSFTEDETK LLQGQPLKSP TKSVSKECER TEIQFGTLNL SVLNLEKIST SSVVLPAKSA KGETSAITKE NACNNEKKAA GSSLSNGGPV
101: LANGCPPVNV PANNGLFENV KTEAVVPPVI PVKIISNPTP QMTLETHKDG TKPTESRKLN KEREITENGS PIVDKHIVAA PAEEAVTSLN KKASQNMPLL
201: PHGLRNTGNI CFLNATLQAL LSCSPFVYLL QDLRNRRIPK VGYPTLSAFV ELISQLDVPD ESVIKKNEKV ITVAAKPLNP AMFDAVLRNF TPDVPAGITA
301: RPRQEDAQEF LSFAMDRMHD ELLKLNGDGL NSKEGMVVSS ADDDAWETVG RKNKSAIVRT QSFVPSELSA IFGGQLQSVV KAAGNKASAT VQPFLLLHLD
401: IFPDAVQTLN DALRLFSTPE SLEGYRTAAG KAGLVTARKS FKIHALSKIM ILHLKRFSYG NHGSTKVYKP LHFPSVLVLS RDLLSSPSQE GRKYELVATI
501: THHGRDPYRG HYTAHAKHGN GQWLRFDDDA VVPVGEKDVL HDQAYVLFYK RV

Best Arabidopsis Sequence Match ( AT4G30890.3 )
(BLAST)

001: MSEKKVFVFG SFTEHETRSF FEQKPTKDPQ NSKDKCVGSI QFGSLNLAAE NSSVNTNGEL KKGEADGTVK SAGSQERLDA SRPASSDKNN DSDAKLPRKN
101: SLRVPEHVVQ NGIIKEISES NKSLNNGVAV KTDPIGLDNL SMSDGESDPV YKASSSKFQA LDNEDFSSDS SSGSIQRKKN LKVPTESVPP VKDFTPRGLI
201: NAGNLCFLNA TLQALLSCSP FVQLLQKIQL QDIPKADSPT LAAFSEFISE LDVPSSSSIR NNVTVVEAGR PFRPAMFEGV LRNFTPDVLN NMSGRPRQED
301: AQEFLSFIMD QMHDELLKLK EQSPKVTASK SSVISSANDD GDEWETVGPK NKSAVTRTQS FVPSELSEIF GGQLKSVVKA KGTKASATVQ PYLLLHLDIH
401: PDGVQGIEDA LHLFSAQEDL EGYRASVTGK TGVVSASKSI KIQKLSKIMI LHLMRFSYGS QGSTKLRKGV KFPLELNLNR SHLVSLSNES LRYELVATIT
501: HHGWDPSKGH YTTDARRKNG QWLRFDDASV TPIGTKLVLH DQAYVLFYKQ V

Arabidopsis Description

UBP24Ubiquitin carboxyl-terminal hydrolase 24 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPS3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.